BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_N13
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT004893-1|AAO47871.1| 541|Drosophila melanogaster RE51884p pro... 262 5e-70
AY069079-1|AAL39224.1| 541|Drosophila melanogaster GH09383p pro... 262 5e-70
AE014297-3582|AAN14008.1| 541|Drosophila melanogaster CG6668-PB... 262 5e-70
AE014297-3581|AAF56318.1| 541|Drosophila melanogaster CG6668-PA... 262 5e-70
AY075582-1|AAL68387.1| 841|Drosophila melanogaster SD08161p pro... 29 5.1
AJ312282-1|CAC41644.1| 841|Drosophila melanogaster nuclear RNA ... 29 5.1
AE014296-2758|AAF49447.3| 841|Drosophila melanogaster CG4118-PB... 29 5.1
AE014296-2757|AAF49448.3| 841|Drosophila melanogaster CG4118-PA... 29 5.1
BT003543-1|AAO39547.1| 1051|Drosophila melanogaster RE04975p pro... 29 6.7
AE014134-1870|AAN10750.1| 1047|Drosophila melanogaster CG31716-P... 29 6.7
AE014134-1869|AAN10749.1| 1051|Drosophila melanogaster CG31716-P... 29 6.7
AE014134-1868|AAN10748.1| 1051|Drosophila melanogaster CG31716-P... 29 6.7
AE014134-1867|AAN10747.1| 1051|Drosophila melanogaster CG31716-P... 29 6.7
AE014134-1866|AAF52937.2| 1051|Drosophila melanogaster CG31716-P... 29 6.7
AE014134-1865|AAF52936.2| 1051|Drosophila melanogaster CG31716-P... 29 6.7
BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p pro... 29 8.8
AY061099-1|AAL28647.1| 743|Drosophila melanogaster LD08841p pro... 29 8.8
AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein. 29 8.8
AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA... 29 8.8
>BT004893-1|AAO47871.1| 541|Drosophila melanogaster RE51884p
protein.
Length = 541
Score = 262 bits (641), Expect = 5e-70
Identities = 120/212 (56%), Positives = 160/212 (75%)
Frame = +1
Query: 106 GLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAYRGGKSFLLSYFLRY 285
G +VQV+N ++ H +VL ++ L +L+R++VKD + VVSVAGA+R GKSFLL +FLRY
Sbjct: 2 GGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRY 61
Query: 286 LNSPTEKRNENGDWLGNETDPLIGFXWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLM 465
+ S + DWLG E+DPL GF W+GGSER TTGILM+ + F+ G+K+A++L+
Sbjct: 62 MYSKYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILL 120
Query: 466 DTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDDLQYLQLFTEYGKLLKNEDG 645
DTQG FDS STVRDC+ +FALST++SSVQIYNL +N+QEDDLQ+LQLFTEYG+L + G
Sbjct: 121 DTQGAFDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTG 180
Query: 646 SKAFQMLMFLIRDWPYYYEHAFGAKGGEXLLK 741
K FQ L FL+RDW + YE +GA GG+ +LK
Sbjct: 181 KKPFQRLQFLVRDWSFPYEAEYGALGGDKILK 212
>AY069079-1|AAL39224.1| 541|Drosophila melanogaster GH09383p
protein.
Length = 541
Score = 262 bits (641), Expect = 5e-70
Identities = 120/212 (56%), Positives = 160/212 (75%)
Frame = +1
Query: 106 GLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAYRGGKSFLLSYFLRY 285
G +VQV+N ++ H +VL ++ L +L+R++VKD + VVSVAGA+R GKSFLL +FLRY
Sbjct: 2 GGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRY 61
Query: 286 LNSPTEKRNENGDWLGNETDPLIGFXWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLM 465
+ S + DWLG E+DPL GF W+GGSER TTGILM+ + F+ G+K+A++L+
Sbjct: 62 MYSKYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILL 120
Query: 466 DTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDDLQYLQLFTEYGKLLKNEDG 645
DTQG FDS STVRDC+ +FALST++SSVQIYNL +N+QEDDLQ+LQLFTEYG+L + G
Sbjct: 121 DTQGAFDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTG 180
Query: 646 SKAFQMLMFLIRDWPYYYEHAFGAKGGEXLLK 741
K FQ L FL+RDW + YE +GA GG+ +LK
Sbjct: 181 KKPFQRLQFLVRDWSFPYEAEYGALGGDKILK 212
>AE014297-3582|AAN14008.1| 541|Drosophila melanogaster CG6668-PB,
isoform B protein.
Length = 541
Score = 262 bits (641), Expect = 5e-70
Identities = 120/212 (56%), Positives = 160/212 (75%)
Frame = +1
Query: 106 GLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAYRGGKSFLLSYFLRY 285
G +VQV+N ++ H +VL ++ L +L+R++VKD + VVSVAGA+R GKSFLL +FLRY
Sbjct: 2 GGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRY 61
Query: 286 LNSPTEKRNENGDWLGNETDPLIGFXWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLM 465
+ S + DWLG E+DPL GF W+GGSER TTGILM+ + F+ G+K+A++L+
Sbjct: 62 MYSKYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILL 120
Query: 466 DTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDDLQYLQLFTEYGKLLKNEDG 645
DTQG FDS STVRDC+ +FALST++SSVQIYNL +N+QEDDLQ+LQLFTEYG+L + G
Sbjct: 121 DTQGAFDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTG 180
Query: 646 SKAFQMLMFLIRDWPYYYEHAFGAKGGEXLLK 741
K FQ L FL+RDW + YE +GA GG+ +LK
Sbjct: 181 KKPFQRLQFLVRDWSFPYEAEYGALGGDKILK 212
>AE014297-3581|AAF56318.1| 541|Drosophila melanogaster CG6668-PA,
isoform A protein.
Length = 541
Score = 262 bits (641), Expect = 5e-70
Identities = 120/212 (56%), Positives = 160/212 (75%)
Frame = +1
Query: 106 GLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAYRGGKSFLLSYFLRY 285
G +VQV+N ++ H +VL ++ L +L+R++VKD + VVSVAGA+R GKSFLL +FLRY
Sbjct: 2 GGSAVQVINASEEHTFVLNEDALSEVLMRDEVKDRFVCVVSVAGAFRKGKSFLLDFFLRY 61
Query: 286 LNSPTEKRNENGDWLGNETDPLIGFXWKGGSERHTTGILMYPEPFITTTAAGEKVAVLLM 465
+ S + DWLG E+DPL GF W+GGSER TTGILM+ + F+ G+K+A++L+
Sbjct: 62 MYSKYVHHDAT-DWLGGESDPLEGFSWRGGSERDTTGILMWSDIFLHDYPNGDKIAIILL 120
Query: 466 DTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDDLQYLQLFTEYGKLLKNEDG 645
DTQG FDS STVRDC+ +FALST++SSVQIYNL +N+QEDDLQ+LQLFTEYG+L + G
Sbjct: 121 DTQGAFDSQSTVRDCATVFALSTMLSSVQIYNLSQNIQEDDLQHLQLFTEYGRLALADTG 180
Query: 646 SKAFQMLMFLIRDWPYYYEHAFGAKGGEXLLK 741
K FQ L FL+RDW + YE +GA GG+ +LK
Sbjct: 181 KKPFQRLQFLVRDWSFPYEAEYGALGGDKILK 212
>AY075582-1|AAL68387.1| 841|Drosophila melanogaster SD08161p
protein.
Length = 841
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 FITTTAAGEKVAVLLMDTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDD-LQ 594
F+ T A E V L + F++ + ++ +++ + YN+ +N Q LQ
Sbjct: 576 FLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQ 635
Query: 595 YLQLFTEYGKLLKNEDGSKAFQMLMF 672
L + + + L+N+D SKA + F
Sbjct: 636 RLSKYNRHARNLRNKDYSKASDGVFF 661
>AJ312282-1|CAC41644.1| 841|Drosophila melanogaster nuclear RNA
export factor 2 (NXF2) protein.
Length = 841
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 FITTTAAGEKVAVLLMDTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDD-LQ 594
F+ T A E V L + F++ + ++ +++ + YN+ +N Q LQ
Sbjct: 576 FLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQ 635
Query: 595 YLQLFTEYGKLLKNEDGSKAFQMLMF 672
L + + + L+N+D SKA + F
Sbjct: 636 RLSKYNRHARNLRNKDYSKASDGVFF 661
>AE014296-2758|AAF49447.3| 841|Drosophila melanogaster CG4118-PB,
isoform B protein.
Length = 841
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 FITTTAAGEKVAVLLMDTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDD-LQ 594
F+ T A E V L + F++ + ++ +++ + YN+ +N Q LQ
Sbjct: 576 FLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQ 635
Query: 595 YLQLFTEYGKLLKNEDGSKAFQMLMF 672
L + + + L+N+D SKA + F
Sbjct: 636 RLSKYNRHARNLRNKDYSKASDGVFF 661
>AE014296-2757|AAF49448.3| 841|Drosophila melanogaster CG4118-PA,
isoform A protein.
Length = 841
Score = 29.5 bits (63), Expect = 5.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +1
Query: 418 FITTTAAGEKVAVLLMDTQGTFDSSSTVRDCSIIFALSTLISSVQIYNLKENLQEDD-LQ 594
F+ T A E V L + F++ + ++ +++ + YN+ +N Q LQ
Sbjct: 576 FLCDTGAYELVGAFLENYLREFENDEFRHNLYKYYSENSIFTLTCNYNVVQNHQTPKILQ 635
Query: 595 YLQLFTEYGKLLKNEDGSKAFQMLMF 672
L + + + L+N+D SKA + F
Sbjct: 636 RLSKYNRHARNLRNKDYSKASDGVFF 661
>BT003543-1|AAO39547.1| 1051|Drosophila melanogaster RE04975p
protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>AE014134-1870|AAN10750.1| 1047|Drosophila melanogaster CG31716-PG,
isoform G protein.
Length = 1047
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 498 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 546
>AE014134-1869|AAN10749.1| 1051|Drosophila melanogaster CG31716-PE,
isoform E protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>AE014134-1868|AAN10748.1| 1051|Drosophila melanogaster CG31716-PD,
isoform D protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>AE014134-1867|AAN10747.1| 1051|Drosophila melanogaster CG31716-PC,
isoform C protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>AE014134-1866|AAF52937.2| 1051|Drosophila melanogaster CG31716-PB,
isoform B protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>AE014134-1865|AAF52936.2| 1051|Drosophila melanogaster CG31716-PA,
isoform A protein.
Length = 1051
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 515 MEQSRTVLLESKVPCVSINSTATFSPAAVVVINGSGYISMPVVCLSDPP 369
+E+S ++E++ + S+ SPAAV NG +PVV +PP
Sbjct: 502 LEKSNEAIVEAETILPTAESSEDISPAAVAPGNGEVEGCLPVVDPVEPP 550
>BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p protein.
Length = 1514
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 SNRNIEDLIN--MSGLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAY 243
+N N+ + N SGL+ + ++++ DNH LE N + E++++L L +A
Sbjct: 891 NNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNL---ENLRELYLQSNKIASIA 947
Query: 244 RGGKSFL 264
G L
Sbjct: 948 NGSFQML 954
>AY061099-1|AAL28647.1| 743|Drosophila melanogaster LD08841p
protein.
Length = 743
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 SNRNIEDLIN--MSGLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAY 243
+N N+ + N SGL+ + ++++ DNH LE N + E++++L L +A
Sbjct: 120 NNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNL---ENLRELYLQSNKIASIA 176
Query: 244 RGGKSFL 264
G L
Sbjct: 177 NGSFQML 183
>AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.
Length = 1514
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 SNRNIEDLIN--MSGLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAY 243
+N N+ + N SGL+ + ++++ DNH LE N + E++++L L +A
Sbjct: 891 NNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNL---ENLRELYLQSNKIASIA 947
Query: 244 RGGKSFL 264
G L
Sbjct: 948 NGSFQML 954
>AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA
protein.
Length = 1514
Score = 28.7 bits (61), Expect = 8.8
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 70 SNRNIEDLIN--MSGLRSVQVVNVNDNHNYVLEDNTLQRILLREDVKDLPLVVVSVAGAY 243
+N N+ + N SGL+ + ++++ DNH LE N + E++++L L +A
Sbjct: 891 NNSNVAHIYNTTFSGLKRLLILHLEDNHIISLEGNEFHNL---ENLRELYLQSNKIASIA 947
Query: 244 RGGKSFL 264
G L
Sbjct: 948 NGSFQML 954
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,864,186
Number of Sequences: 53049
Number of extensions: 611159
Number of successful extensions: 1867
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1863
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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