Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N03
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   9.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 53  KRKHDKPNKFQKHTYELQGHKMIHL 127
           K + +  N + K+TY  QG+K+  L
Sbjct: 337 KNEDETKNHYSKNTYNEQGNKLADL 361


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 53  KRKHDKPNKFQKHTYELQGHKMIHL 127
           K + +  N + K+TY  QG+K+  L
Sbjct: 229 KNEDETKNHYSKNTYNEQGNKLADL 253


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
          protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 69 LSCFLLKIYVIFTLFVSY 16
          ++CFLL +Y I++   SY
Sbjct: 6  IACFLLLLYYIYSKHYSY 23


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 331 FNQY---FVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWT-- 495
           FN Y   F  I +F+ +      +++ +      KRR+      + L++A  F+  WT  
Sbjct: 64  FNSYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNIGLVVANAFFLLWTPA 123

Query: 496 TLFNVIENN 522
            +F V+  N
Sbjct: 124 VIFVVLSKN 132


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 683 LKITSEMKDTHGVLMTK 733
           LK+T+ + D HG L  K
Sbjct: 77  LKLTNNISDKHGFLKEK 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,917
Number of Sequences: 336
Number of extensions: 4478
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)