Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N03
         (873 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical pr...    85   6e-17
Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical pr...    32   0.62 
AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical ...    31   1.1  
AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical...    30   1.9  
Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical pr...    29   5.7  
AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical ...    29   5.7  

>Z81143-6|CAI58649.1|  283|Caenorhabditis elegans Hypothetical
           protein ZK265.9 protein.
          Length = 283

 Score = 85.0 bits (201), Expect = 6e-17
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
 Frame = +1

Query: 139 TKPTREASSIQEVLTLMIVXICKKILFFDTNXXXXXXXXXXXXXXXXXDVLTFPKSYFS- 315
           TK     +S       + V I ++ILF D                     +    +Y+  
Sbjct: 14  TKRPASPNSTPNAALGIFVAIARQILFIDARKVALFYLAFVTVLSFIESRIELDSTYYLV 73

Query: 316 RSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATVFWWGWT 495
           +  +  NQY VK+GWFWTLVI  P++  +S       R       + RL + T  W+   
Sbjct: 74  QKHSVLNQYGVKMGWFWTLVIVGPFIWFSSKAHNRRDRDQ-PIVDVCRLGVGTACWYFSV 132

Query: 496 TLFNVIENNYGRCNSKSYDNKITCLKNGSFWN-GFDISGHCFILIYSSLVLIEEARAING 672
             F+ +      C+      +  C +    W  G+DISGHCF++IYS L++ EEA A   
Sbjct: 133 QFFHKVLALTSMCDKGRTLTRAQCSEKEGVWTPGYDISGHCFLMIYSILIITEEAIAYRH 192

Query: 673 WERIKDYIRDERYSRSIDDK 732
           ++++ D +      R   D+
Sbjct: 193 YQQVTDAVHQMDGDREEHDR 212


>Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical
           protein W09D12.3 protein.
          Length = 309

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 16/53 (30%), Positives = 33/53 (62%)
 Frame = +1

Query: 490 WTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCFILIYSSLVLI 648
           WTT+  ++EN + + +S+ +++ I  L    F N F +SG+  +LI +S++ +
Sbjct: 189 WTTV--LLENRWKKSHSRRHNHFIKKLTRVIFCNSFLMSGNLLLLIATSVMYV 239


>AL137227-7|CAB70235.1|  787|Caenorhabditis elegans Hypothetical
           protein F58D5.6 protein.
          Length = 787

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +1

Query: 619 ILIYSSLVLIEEARAINGW-ERIKDYIRDERYSRSIDDKAISTNPLKNISSEELEILKRS 795
           IL Y S    E    +N W +RI D I+ E     +D   + T P+K      L  +K+ 
Sbjct: 383 ILPYDSSSDYENTTLVNKWWDRINDEIKFEPLIEMLDKFIVITKPVKTF-VPFLATIKQF 441

Query: 796 YEKFTPYVRGLFIG 837
            E+  P + G F G
Sbjct: 442 TEEDIPQILGSFDG 455


>AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical
           protein F41E6.14 protein.
          Length = 656

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +1

Query: 490 WTTLFNVIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCFILIYSSLVLI 648
           W  L   +  +  + N+++ D  I   KN   WN FDI  + F+ + ++++++
Sbjct: 195 WQFLLGSVAFDLSQKNNETMDFYIEMKKNKENWNLFDIVPYIFLAVLTTVLIL 247


>Z69787-6|CAA93637.1|  341|Caenorhabditis elegans Hypothetical
           protein C44C10.7 protein.
          Length = 341

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 508 VIENNYGRCNSKSYDNKITCLKNGSFWNGFDISGHCF 618
           +I+N+  R N   YD  I  ++N S +N  ++ GHC+
Sbjct: 300 IIKNDPNRFN---YDCVIHAIENASLFNPSEVIGHCY 333


>AC024788-1|AAF60612.2|  235|Caenorhabditis elegans Hypothetical
           protein Y46E12A.3 protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 711 VSFISDVIFNALPSIYCSGFFY*N 640
           V F  D+IF++LP IY  G+F  N
Sbjct: 128 VEFQKDLIFDSLPLIYVDGYFLGN 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,715,964
Number of Sequences: 27780
Number of extensions: 385038
Number of successful extensions: 924
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)