Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_N01
         (887 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   1.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   2.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   7.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   7.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 452 LKCNTYMTLVYFYLRIVLLFHYCFILF 372
           L C  Y    +  L  V  F+Y FI+F
Sbjct: 97  LLCTYYFYYAFIILLCVYYFYYAFIIF 123



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 452 LKCNTYMTLVYFYLRIVLLFHYCFILF 372
           L C  Y TL   +L  +  F+  FI+F
Sbjct: 196 LLCLDYFTLHLLFLPCIYYFYSAFIIF 222



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 452 LKCNTYMTLVYFYLRIVLLFHYCFILF 372
           L C  Y  +  F+L  +  F+  FI+F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIF 156



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -3

Query: 756 LQFYCNCFL*FTMSISFYLIYLVTSRFPYSLYNPYFIEITVN 631
           + ++ + F+ FT+ + FY + ++     Y  Y   FI  TV+
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIYYFYY--AFILFTVH 251


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = -3

Query: 801 CFLKFVFSYDLKNIVLQ----FYCNCFL*FTMSISFYLIYLVTSRFPYSLYNPYFI 646
           C LK +F+  +KN+ L      +C+  +  T+     L Y+  ++F   L N Y I
Sbjct: 70  CILKHIFNILMKNVTLNDVVFIFCSAPIIITILDIEILGYVNKAKFGKLLINLYTI 125



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
 Frame = -3

Query: 180 FAHDQCASGIFI-----GLN*NFTWRLVFXRTVFVN 88
           FAH  C   I I     GLN NFT +  F R V ++
Sbjct: 29  FAHFICLFPITINIRKNGLNYNFTKKCYFLRMVLID 64


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 443 NTYMTLVYFYLRIVLLFHYCFILFLNLEYIVLSNV 339
           NT+ + +YF   I L F    I+ L L  I+  N+
Sbjct: 230 NTFWSALYFLTIIFLFFIIPLIILLILYCIIAKNL 264


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 398 LFHYCFILFLNLEYIVLSN 342
           L H CF+L   L YI+L++
Sbjct: 274 LCHLCFLLDEKLSYIILTS 292


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 443  YILTSIYFLFNDNNI 487
            Y+L  IY +FN NN+
Sbjct: 1016 YLLLVIYSVFNMNNV 1030


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 443  YILTSIYFLFNDNNI 487
            Y+L  IY +FN NN+
Sbjct: 1016 YLLLVIYSVFNMNNV 1030


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 200 VIKVYFCLHMINALLEFLS 144
           V  V+FCL   N L+E +S
Sbjct: 91  VATVFFCLFYQNKLIEVIS 109


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 21/91 (23%), Positives = 40/91 (43%)
 Frame = +2

Query: 287 INIHKILVNNMDIFTYIIHYLKLYTLDLKIR*NNNEITTRFLNKNKQVSCMYYILTSIYF 466
           I + K+L     I    I+ L  Y    KI     + T + LN   ++  +++ L+ +  
Sbjct: 458 IELVKMLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSKLVK 517

Query: 467 LFNDNNIQLIQLKFMNCYMCNSKNLKFFVSN 559
           LFN+    ++ L F   ++     + FF +N
Sbjct: 518 LFNETFGIVLLLMFGVSFVVIVITIFFFTAN 548


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/41 (19%), Positives = 22/41 (53%)
 Frame = -1

Query: 497 ELIEYYCH*IKNKSKLKCNTYMTLVYFYLRIVLLFHYCFIL 375
           +++E+    + N +K +   ++ +   ++   L+F YC +L
Sbjct: 471 KVLEFDVKCVSNYTKQQSKIHLIVRSVFVTTYLMFDYCTVL 511


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 21/91 (23%), Positives = 40/91 (43%)
 Frame = +2

Query: 287 INIHKILVNNMDIFTYIIHYLKLYTLDLKIR*NNNEITTRFLNKNKQVSCMYYILTSIYF 466
           I + K+L     I    I+ L  Y    KI     + T + LN   ++  +++ L+ +  
Sbjct: 183 IELVKMLKIRFVILNKQINNLIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSKLVK 242

Query: 467 LFNDNNIQLIQLKFMNCYMCNSKNLKFFVSN 559
           LFN+    ++ L F   ++     + FF +N
Sbjct: 243 LFNETFGIVLLLMFGVSFVVIVITIFFFTAN 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,245
Number of Sequences: 336
Number of extensions: 4170
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)