Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_M17
(799 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 236 1e-62
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 9e-57
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 159 3e-39
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 4e-38
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 36 0.029
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 34 0.15
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_22570| Best HMM Match : Filament (HMM E-Value=0.1) 31 0.82
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 31 1.4
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 30 1.9
SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7) 29 3.3
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 7.6
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 236 bits (578), Expect = 1e-62
Identities = 124/218 (56%), Positives = 151/218 (69%), Gaps = 3/218 (1%)
Frame = +1
Query: 115 REDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARRASW 294
RE+ ++ AK+AEQAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67
Query: 295 RIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTG---ES 465
R+ISS+EQK E+ + + YR + EL C+++L +L+ YL+ Q E+
Sbjct: 68 RVISSMEQK----APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEA 123
Query: 466 KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 645
KVFY KM+GDYHRYL E A G+ RKE E S AYK AS A EL P+HPIRLGLALNF
Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNF 182
Query: 646 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYR 759
SVFYYEI N P AC+LAK AFDDAIA LD L +ESY+
Sbjct: 183 SVFYYEIENKPPEACKLAKEAFDDAIAVLDNLKDESYK 220
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 217 bits (530), Expect = 9e-57
Identities = 112/198 (56%), Positives = 141/198 (71%), Gaps = 2/198 (1%)
Frame = +1
Query: 172 MVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDKL 351
M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERKK 55
Query: 352 NMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYKMKGDYHRYLAEFATGN 531
YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKGDY+RY E A +
Sbjct: 56 QNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGAD 115
Query: 532 DRKEAAENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKA 705
R+E + ++ AY A +IA + LPPT PIRLGLALNFSVFYYEI+ +AC LAK
Sbjct: 116 RRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIVEDSKQACDLAKK 175
Query: 706 AFDDAIAELDTLSEESYR 759
AFDDAIAELDTLSE+ Y+
Sbjct: 176 AFDDAIAELDTLSEDQYK 193
Score = 91.9 bits (218), Expect = 5e-19
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Frame = +1
Query: 532 DRKEAAENSLVAYKAASDIAMT---ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAK 702
D E +L AYK A + A T +L PT PIRLGLALNFSVF+YEI + + AC+LAK
Sbjct: 204 DNLTVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAK 263
Query: 703 AAFDDAIAELDTLSEESYR 759
AFDDAIAELD+L+E+ Y+
Sbjct: 264 QAFDDAIAELDSLNEDQYK 282
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 159 bits (385), Expect = 3e-39
Identities = 81/128 (63%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Frame = +1
Query: 106 MSEREDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARR 285
M+++E++VY AKLAEQAERYD+MV +MK V EL+ E+RNLLSVAYKNVIGARR
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57
Query: 286 ASWRIISSIEQKEETKGAE-DKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 462
ASWRII+SIEQKEE+KG + KL MIR YR +E+EL+ IC +IL +LD LI +SQ+ E
Sbjct: 58 ASWRIITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEE 117
Query: 463 SKVFYYKM 486
SKVFY K+
Sbjct: 118 SKVFYNKI 125
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 155 bits (376), Expect = 4e-38
Identities = 73/145 (50%), Positives = 107/145 (73%)
Frame = +1
Query: 106 MSEREDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARR 285
M RE +Y AKL+EQ +RYDEM + MK V + +L+ EERNLLSV+YKN++G RR
Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRR 137
Query: 286 ASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGES 465
+SWR+ISSIE+K L +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ E+
Sbjct: 138 SSWRVISSIEEK---TAESSSLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEEN 193
Query: 466 KVFYYKMKGDYHRYLAEFATGNDRK 540
KVFY+K+KGDY+RYLAEF+ G + K
Sbjct: 194 KVFYFKLKGDYYRYLAEFSHGQEHK 218
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 72.5 bits (170), Expect = 4e-13
Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Frame = +1
Query: 88 NHLSSTMS---EREDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVA 258
NH S + R + V AKLAEQ ER+++++ MK N S N+ E RNLLSV
Sbjct: 178 NHPSGVVQMQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVG 234
Query: 259 YKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDIL 417
YKNV+G++R +WR + + + +L I Y+ ++E EL+ +C +IL
Sbjct: 235 YKNVVGSKRFAWRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 36.3 bits (80), Expect = 0.029
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Frame = +1
Query: 118 EDNVYKAKLAEQAERYDEMV----EAMKNVXSRNVSDNELTVEE----RNLLSVAYKNVI 273
+ N+ K KL + E Y + + +A +N N N+L +E R+L S+ + N +
Sbjct: 1955 DPNLQK-KLKDLEESYQKALKDNEDAERNYLDLNRKYNKLVMEHGNISRDLESLKHDNDL 2013
Query: 274 GARRA-SWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDK 432
R ++ Q++E + A++K+N + AY++ E++LR+ D++ K
Sbjct: 2014 KNERIIDLESSLAVYQEQELQSAKNKINRLEAYKTSYEEKLRNQQEDLVAAQQK 2067
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 91 HLSSTMSEREDNVYKAKLAEQAERYDEM---VEAMKNVXSRNVSDNELTVEERNLLSVAY 261
H+ M + D V +AK A+ YD + ++ + + + D E +++LL+ +
Sbjct: 345 HMEREMDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--H 401
Query: 262 KNVIGARRASWRIISSIEQKEETKGAED 345
K ++G + W++ EQ GAED
Sbjct: 402 KKIVGFDKKIWKVHHEKEQMIGAGGAED 429
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 31.5 bits (68), Expect = 0.82
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = +1
Query: 130 YKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 309
+ KLAE +Y + +E M ++ + + + +E+ L + K + A++ S + ++
Sbjct: 1460 FNDKLAETQSQYSQDMEEMNQ--AKKELEIKYSTKEKELRAELEKREVQAKQTSETMTAN 1517
Query: 310 IEQ--KEETKGAEDKLNMIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGESKVFYYK 483
I Q + E K ++ L + ++ + + S I +++++ SQ
Sbjct: 1518 ISQLNEREKKHKQEMLVLENNWKEKYSEIEERYSSQISNIIEQHQREISQ---------- 1567
Query: 484 MKGDYHRYLAEFATGNDRK 540
+K D+H LAE N +K
Sbjct: 1568 LKSDHHSELAELKAHNQQK 1586
>SB_22570| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 601
Score = 31.5 bits (68), Expect = 0.82
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = +1
Query: 88 NHLSSTMSEREDNVYKAKLAEQAERYDEMVEAM----KNVXSRNVSDNELTVEERNLLSV 255
N L ST++ER + ++ L E R+DE + ++ KN+ R S N+L +N S
Sbjct: 217 NSLVSTLNERLERK-ESTLMECRRRHDEELTSLQKKIKNLEERLSSTNQLISSTKNDESG 275
Query: 256 AYKNVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKE 390
+ +I ++ I+ +E+ + AE +L M A ++E E
Sbjct: 276 RIQALIKRVCLQYKRINRLEETRHQEKAEMELKM--AQLKEIENE 318
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Frame = +1
Query: 88 NHLSSTMSERED-NVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYK 264
N ++ ER D +V L Q R + + MK R+ ++ + +E++ L A
Sbjct: 430 NSVNVLRKERVDLDVQVTNLRSQKIRLEAEISVMKEERRRDDNEVDHLRKEKSDLEKAMH 489
Query: 265 NVIGARRASWRIISSIEQKEETKGAEDKLNMIRAYRSQVEKELRDICSD 411
++ R ++ + I E+T + + +R +EKELRD+ S+
Sbjct: 490 SL---RSEKTKVETDITMAEDTWRKRNDTSELRFEADDLEKELRDLRSE 535
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 130 YKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 309
YK K E + ++ +A ++ S N SDNE+ + RN +S + + R +S +
Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082
Query: 310 IEQKEETKGAEDKLN--MIRAYRSQVEKELRD 399
+EQ+++ + + ++N I R +++K + +
Sbjct: 1083 LEQEKQQRLEKLEMNNQEIMFLREELQKAVEE 1114
>SB_43756| Best HMM Match : SlyX (HMM E-Value=3.7)
Length = 179
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/80 (20%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 94 LSSTMSEREDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEER-NLLSVAYKNV 270
LSS +SER + + +L + E Y ++ + R+ +L ++ L+++++
Sbjct: 53 LSSVLSERCGELERRQLEMEREFYTKIQALEAQISDRSEEWKDLLAQDHAKLMTISHDTT 112
Query: 271 IGARRASWRIISSIEQKEET 330
+ W++ + KE+T
Sbjct: 113 YDLKSGYWQVEMDPKDKEKT 132
>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1176
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 481 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHP 618
++K Y ++L +F KE AENS A A+ A PP P
Sbjct: 859 EVKEAYRKWLDDFMKSAREKEIAENSRYASTQAATSAPYASPPPSP 904
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.3 bits (60), Expect = 7.6
Identities = 33/147 (22%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +1
Query: 112 EREDNVYKAKLAEQAERYDEMVEAMKNVXSRNVSDNELTVEERNL--LSVAYKNVIGARR 285
E+ N ++ L + ++Y+E++EA++ S+ VEER L L+ A +G
Sbjct: 1651 EKMKNDHEQDLTSERKKYEEIIEALQGELSK-AEVRLKEVEERLLSALAEAKSQKLGNDP 1709
Query: 286 ASWRIISSIEQKEETKGAEDKLNM-IRAYRSQVEKELRDICSDILGVLDKYLIPSSQTGE 462
S I + K KG E + + + A + + E+ L+ + ++ + +K I +
Sbjct: 1710 ESPTSIDESDIKLIKKGLEFEYDQKLSAEKRKFEETLQGLRKEVGNLQEKRKII-----Q 1764
Query: 463 SKVFYYKMKGDYHRYLAEFATGNDRKE 543
+V+ + G R++ E + N + E
Sbjct: 1765 ERVYNQESFGAVDRHVIEKSIANYKME 1791
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,156,888
Number of Sequences: 59808
Number of extensions: 389709
Number of successful extensions: 1123
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2203769656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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