Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M17
         (799 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   1.1  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 424  LDKYLIPSSQTGESKVFYYKMKGDYH-RYLAEFATGNDRKEAAENSLVAYKAAS 582
            +D+ L+P SQ   + VF  +    YH R +AE   G          + A +A S
Sbjct: 924  IDRVLVPGSQQNVAGVFNLRPATTYHLRIVAENEIGASDPSDTVTIITAEEAPS 977


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 721 IAELDTLSEESYRTPRSSC 777
           IAEL+TLS E   +P + C
Sbjct: 194 IAELETLSVEPKVSPMTFC 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 655 YYEILNSPDRACRLAKAAFDDAIAELDTLSEESYRTPRSSCXCC 786
           Y  I ++P +A   +    D+    LDT   +  R+ R S  CC
Sbjct: 313 YEGISSTPSQASSCSCLDCDEIRESLDTQFLQVCRSRRHSDSCC 356


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 721 IAELDTLSEESYRTPRSSC 777
           IAEL+TLS E   +P + C
Sbjct: 194 IAELETLSVEPKVSPMTFC 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,050
Number of Sequences: 438
Number of extensions: 3452
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)