Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_M14
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19) 35 0.064
SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_43083| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_22262| Best HMM Match : Oleosin (HMM E-Value=0.98) 29 3.2
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_10755| Best HMM Match : Peptidase_M23 (HMM E-Value=7.2) 29 4.2
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_9230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_29890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_7642| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 28 7.3
SB_17542| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38) 28 9.7
SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15) 28 9.7
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 9.7
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 28 9.7
SB_290| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
Length = 1341
Score = 35.1 bits (77), Expect = 0.064
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 433 SKNDPYHDTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRN 597
S++D Y ++P LQSP + + + +GLP P P+ +P K + +N
Sbjct: 373 SRDDSYTKSKPKKLQSPRSTQHKDCGVHFSGLPPTPMEPNGFPIPSLKYFNSPQN 427
>SB_25099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 33.1 bits (72), Expect = 0.26
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = -3
Query: 395 YSLYCHDQTCLLKTGSRDYLLCCHDQTSRQKMGSRDYFQYCHD 267
Y+ YC D T RDY CHD T RDY YCHD
Sbjct: 238 YTDYCRDYTDYC----RDYTDYCHDYTDY----CRDYTDYCHD 272
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = -3
Query: 395 YSLYCHDQTCLLKTGSRDYLLCCHDQTSRQKMGSRDYFQYCHD 267
Y+ YC D T RDY C D T RDY YCHD
Sbjct: 224 YTDYCRDNTDYC----RDYTDYCRDYTDY----CRDYTDYCHD 258
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = -3
Query: 386 YCHDQT--CLLKTG-SRDYLLCCHDQTSRQKMGSR---DYFQYCHD 267
YCHD T C T RD+ CHD T + + DY YCHD
Sbjct: 331 YCHDNTDYCRGYTDYCRDHTDYCHDYTDYCRGYTDYCCDYTDYCHD 376
>SB_43083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
++A +VMA++ V+ ++A +VMA V + +VMA+ V+A +
Sbjct: 27 VMAVMMVMAVMMVMAVMMVMAVMMVMAVMMVKAVMMVMAVMMVMAMMMVIAVM 79
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVV 398
++A +VMA++ V ++A +VMA V+ + +VMA+ V+
Sbjct: 45 VMAVMMVMAVMMVKAVMMVMAVMMVMAMMMVIAVMMVMAVMMVMAVMAVM 94
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
++A +VMA++ V+ T ++A VM V+ + VMA+ VVA +
Sbjct: 90 VMAVMMVMAVMMVMAVTMVVAVMAVMMVMAVMMMMAVMMVMAVMAVMMVVAVM 142
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
++A +VM ++ V+ ++A +VMA V+ + +VMA+ V A +
Sbjct: 9 VMAVMMVMMVMAVMIVMAVMAVMMVMAVMMVMAVMMVMAVMMVMAVMMVKAVM 61
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
++A +VMA++ V+ + A +VMA V+ + +VMA+ V+A +
Sbjct: 39 VMAVMMVMAVMMVMAVMMVKAVMMVMAVMMVMAMMMVIAVMMVMAVMMVMAVM 91
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +3
Query: 249 LLAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
++A +VMA++ V+ ++A +VMA V+ + +VMA+ VVA +
Sbjct: 63 VMAVMMVMAMMMVIAVMMVMAVMMVMA---VMAVMMVMAVMMVMAVTMVVAVM 112
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 252 LAAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVV 398
+A +VMA++ V+ ++A +VMA V+ + VM + V+
Sbjct: 1 MAVMMVMAVMAVMMVMMVMAVMIVMAVMAVMMVMAVMMVMAVMMVMAVM 49
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 255 AAYLVMAILEVVTATHLLAACLVMATQEVVTATRLQEACLVMAIQGVVATV 407
A +VMA++ V+ ++A +VMA V+ + VM + V V
Sbjct: 59 AVMMVMAVMMVMAMMMVIAVMMVMAVMMVMAVMAVMMVMAVMMVMAVTMVV 109
>SB_17754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)
Frame = -3
Query: 386 YCHDQT--CLLKTG-SRDYLLCCHDQTSRQKMGSR---DYFQYCHD 267
YCHD T C T RD+ CHD T + + DY YCHD
Sbjct: 201 YCHDNTDYCRGYTDYCRDHTDYCHDYTDYCRGYTDYCCDYTDYCHD 246
>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 479 PPQQIRYNPPHGPPMVYPVYHGTPPT 556
PPQQ +Y P P +P G+PPT
Sbjct: 481 PPQQRQYPPSSTPQQGFPQRPGSPPT 506
>SB_23925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 683 VSACRWSGYARKPFQPARRDSKALIRLKAFRI 588
+ RW R P++P RRD L R++ FR+
Sbjct: 53 IDRARWRTLER-PYEPCRRDEDRLYRIEKFRL 83
>SB_22262| Best HMM Match : Oleosin (HMM E-Value=0.98)
Length = 418
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 457 TQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLR 561
T+ L L+S +N Q+ PR T P+ PR PSD R
Sbjct: 265 TRILELRSGLSN--QTTPRATTTHPNSPREPSDAR 297
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 400 PRLPVFRRTELSKNDPYHDTQPLSLQSPATNKIQSAPR-P-TNGLPSLPRNPSDLRLP 567
PR+P L+ P+ PL+ + P T+ + P P T+ LP PR P LP
Sbjct: 232 PRIPFTHALPLTPRIPFTHVLPLTSRIPFTHALPLTPGIPFTHALPLTPRIPFTHALP 289
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 400 PRLPVFRRTELSKNDPYHDTQPLSLQSPATNKIQSAPR-P-TNGLPSLPRNPSDLRLP 567
PR+P L+ P+ PL+ + P T+ + PR P T+ LP P P LP
Sbjct: 280 PRIPFTHALPLTPGIPFTHALPLTPRIPFTHALPLTPRIPFTHALPLTPGIPFTHALP 337
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 400 PRLPVFRRTELSKNDPYHDTQPLSLQSPATNKIQSAPR-P-TNGLPSLPRNPSDLRLP 567
PR+P L+ P+ PL+ P T+ + P P T+ LP PR P LP
Sbjct: 364 PRIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPGIPFTHALPLTPRIPFTHALP 421
>SB_10755| Best HMM Match : Peptidase_M23 (HMM E-Value=7.2)
Length = 260
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 424 TELSKNDPYHDTQPLSLQSPAT 489
TE K DP+ D PLSL+ P+T
Sbjct: 59 TEARKLDPFPDKSPLSLKQPST 80
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = -3
Query: 434 DSSVLLKTGNRGYYSLYCHDQTCLLKTGSRDY---LLCCHDQTSRQKMGSRDYFQYCHDQ 264
+SS L K Y YC + + D+ + C + +++G+R +YC+
Sbjct: 131 NSSTLPKHEVYDEYKAYCESMSASRTLSAPDFGKIIKCVFPRVKARRLGTRGNSKYCYSG 190
Query: 263 IGRQK 249
I R+K
Sbjct: 191 IQRKK 195
>SB_9230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +1
Query: 406 LPVFRRTELSKNDPYHDTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLP 567
+PV + K++ H T L+++ P T++ ++ P T G PS+ + +LP
Sbjct: 1 MPVTGKRGNRKSEAAHSTITLTVKDPTTHQEKTTP-STAGNPSITNDTHTTKLP 53
>SB_29890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +1
Query: 409 PVFRRTELSKNDPYHDTQPLSLQSPATNK--IQSAPRPTNGLPSLPRNPSDLRLP 567
P+ + LS N P + QPLS + P +NK + + +N P + P LP
Sbjct: 14 PLSNKQPLSNNRPLSNKQPLSNKQPLSNKQPLSNKQPLSNKQPLSNKGPLSNELP 68
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 409 PVFRRTELSKNDPYHDTQPLSLQSPATNK 495
P+F + LS P + +PLS + P +NK
Sbjct: 8 PLFNKQPLSNKQPLSNNRPLSNKQPLSNK 36
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 409 PVFRRTELSKNDPYHDTQPLSLQSPATNK 495
P+ + LS P D QPLS + P +NK
Sbjct: 92 PLSNKQPLSNKQPLSDKQPLSNKQPLSNK 120
>SB_7642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 394 TPCIAMTRHAS*RRVAVTTSCVAMTRQAARRWVAVTTSSIAMTR 263
T C+ MTR + R T C+ MTR T + MTR
Sbjct: 18 TRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTR 61
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 394 TPCIAMTRHAS*RRVAVTTSCVAMTRQAARRWVAVTTSSIAMTR 263
T C+ MTR + R T C+ MTR T + MTR
Sbjct: 24 TRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTRCLTMTR 67
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 394 TPCIAMTRHAS*RRVAVTTSCVAMTRQAARRWVAVTTSSIAMTR 263
T C+ MTR + R T C+ MTR T + MTR
Sbjct: 60 TRCLTMTRCPTITRCLTITRCLTMTRCLTMTRCLTMTRCLTMTR 103
>SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 808
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +1
Query: 481 PATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIRNAFSRISAFESRRAGWNGLRA* 660
PA+N +QS P + N +DL L ++ F + A E+ R G + L+
Sbjct: 410 PASNMVQSKPTVLPSTRPIATNQADLLL-------SPKSGFQDVFAVETTRPGSSNLKLD 462
Query: 661 PLHLQAETGRNLQ 699
LH+++ T +Q
Sbjct: 463 TLHVESITDSIVQ 475
>SB_17542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -3
Query: 377 DQTCLLKTGSRDYLLCCHDQTSRQKMGSRDYFQ------YCHDQIGRQKMDIRVRPTLTI 216
D TCL + + +L+C ++S K R +F C D++ R++ I L +
Sbjct: 111 DSTCLCRCTAMSFLVCARSRSSPGKSHDRVFFSAVDNHGKCSDELRRKRSLITSYKDLVL 170
Query: 215 RR 210
+R
Sbjct: 171 KR 172
>SB_47033| Best HMM Match : WAP (HMM E-Value=1.8e-38)
Length = 667
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 409 PVFRRTELSKNDPYHDTQPLSLQSPATNKI-QSAPRP-TNGLPSLPRNPSDLRLP 567
P ++ +++ P P++ Q P TNK+ + +P T LP + P+ +LP
Sbjct: 274 PTTKQLPITEKKPTTTKLPMTEQIPTTNKMPMTEKKPTTKQLPITEKKPTTTKLP 328
>SB_42146| Best HMM Match : GYF (HMM E-Value=5.7e-15)
Length = 924
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 421 RTELSKNDPYHDTQPLSLQSPATNKIQSAPRPTNGLPSLPRNPS 552
++E K++ +PL ++P T +P+PT P P P+
Sbjct: 255 QSEEIKDEKSSKDKPLEEKAPQTKSTSPSPQPTEAKPHTPPPPT 298
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 454 DTQPLSLQSPATNKIQSAPRPTNGLPSLPRN 546
+T P + S +T+ +AP TNG + PRN
Sbjct: 961 ETTPTTATSMSTDGTTAAPMSTNGTTTAPRN 991
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 719 CLSSRRTCKFRPVSACRWSGYAR 651
CL +R+ C S CRWS Y +
Sbjct: 77 CLVTRKVCYHWSGSCCRWSNYIK 99
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 460 QPLSLQSPATNKIQSAPRPTNGLPSLPRNPSDLRLPGAKLWKQIR 594
QPL+L SP + +A N P+LP P P K K+IR
Sbjct: 89 QPLNLSSPPNSTPSTAQAVANNDPTLPTPPFSTPRPRPKA-KRIR 132
>SB_290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 4 PADEYLCVRALF*TFVCYKQTHFHNVFKTLCVIA 105
PAD LC R + V Y+QT +N +C IA
Sbjct: 111 PADNVLCARQGCWSSVMYRQTLNYNAEDEVCAIA 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,795,422
Number of Sequences: 59808
Number of extensions: 505994
Number of successful extensions: 1846
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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