Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M14
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    27   0.49 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.86 
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.6  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   8.0  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 664 LHLQAETGRNLQVRREERQRGL 729
           +H +  TG N  +RREERQR +
Sbjct: 925 VHSRRGTGLNCAIRREERQRSM 946


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 26.6 bits (56), Expect = 0.86
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 130 NNTQNHSKLQ*HRAF*KHCESVFVYNTQTSRTMRGRTSTHRP 5
           N+   H+  + HR   KHC++ F  + +  R +R R +  RP
Sbjct: 172 NHVNTHTGTKPHRC--KHCDNCFTTSGELIRHIRYRHTHERP 211


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 482 PQQIRYNPPHGPPMVYPVYHGTPPTYVYQAQNS 580
           PQ + + P H P +++P YH T   + YQ   S
Sbjct: 175 PQHVLH-PAHHPALLHPAYH-TGLHHYYQPSPS 205


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 482 PQQIRYNPPHGPPMVYPVYHGTPPTYVYQAQNS 580
           PQ + + P H P +++P YH T   + YQ   S
Sbjct: 175 PQHVLH-PAHHPALLHPAYH-TGLHHYYQPSPS 205


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = -2

Query: 177 CLLPPPNLLDVTFCTLIIHKITVSCNN 97
           C   PP L+D     + +H   + C N
Sbjct: 43  CCKLPPELIDAVLSNVDLHWSCIGCTN 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,178
Number of Sequences: 2352
Number of extensions: 17239
Number of successful extensions: 69
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)