Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M14
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   1.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.2  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   7.3  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   7.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.7  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 171 ADIRIQSPEDFLVTADCQGRADTDIHLLAAYLVMAILEVVTATHLL 308
           A+I +   E   +  +C   +D DIHL ++ L+    +  T   ++
Sbjct: 88  AEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIM 133


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/15 (40%), Positives = 7/15 (46%)
 Frame = +1

Query: 295 LPIFWRLVWSWQHRR 339
           L +FW   W W   R
Sbjct: 165 LSVFWGSAWQWNEER 179



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = +1

Query: 241 ISIFWRPIWSW 273
           +S+FW   W W
Sbjct: 165 LSVFWGSAWQW 175


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/24 (33%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +2

Query: 23  ASAHCSRRLCVINKHTF-TMFSKR 91
           A  HC + +C+  K +F  ++ KR
Sbjct: 70  AGGHCEKGVCICRKTSFKDLWDKR 93


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 476 SPPQQIRYNPPHGPPMVYP 532
           SPP   +  PP GPP   P
Sbjct: 38  SPPNPSQGPPPGGPPGAPP 56



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 460 QPLSLQSPATNKIQSAPRPTNGLP 531
           QP   QSP   +  S P P+ G P
Sbjct: 24  QPSPHQSPQAPQRGSPPNPSQGPP 47


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 204 LVTADCQGRADTDIHLLAAYLVMAILEVVTATHLL 308
           L+T +C   +DT++HL    +   I +  T   +L
Sbjct: 100 LIT-ECSAISDTNVHLKITKIFQCITKFKTINDIL 133


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +1

Query: 58  KQTHFHNVFKTLCVIATYCDFVYY*CTK 141
           K T  HN F+    +   CD ++   TK
Sbjct: 199 KPTRDHNAFEYAMAVMKMCDILHLRHTK 226


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 528 TQFTTEPLRPTFTRRKTLEANTE 596
           +QF  +  R T+TR +TLE   E
Sbjct: 266 SQFERKRGRQTYTRYQTLELEKE 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,873
Number of Sequences: 438
Number of extensions: 4709
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)