Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_M13
(863 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric... 105 2e-22
BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric... 105 2e-22
AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens ... 105 2e-22
AF083958-1|AAC33126.1| 237|Homo sapiens Nip1 isoform s3 protein. 36 0.19
D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol 1,4,5-tri... 33 1.0
BC130329-1|AAI30330.1| 536|Homo sapiens arylsulfatase family, m... 33 1.8
BC050392-1|AAH50392.1| 192|Homo sapiens ARSK protein protein. 33 1.8
BC036047-1|AAH36047.1| 542|Homo sapiens ARSK protein protein. 33 1.8
AY875939-1|AAW66667.1| 536|Homo sapiens arylsulfatase K protein. 33 1.8
AY358596-1|AAQ88959.1| 536|Homo sapiens Bone Rel Sulphatase pro... 33 1.8
BC113811-1|AAI13812.1| 82|Homo sapiens TMEM63A protein protein. 32 3.1
BC030245-1|AAH30245.1| 807|Homo sapiens transmembrane protein 6... 32 3.1
AL591895-4|CAH71996.1| 807|Homo sapiens transmembrane protein 6... 32 3.1
AL117348-2|CAI21798.1| 807|Homo sapiens transmembrane protein 6... 32 3.1
AK222944-1|BAD96664.1| 828|Homo sapiens Hypothetical protein KI... 32 3.1
AK222934-1|BAD96654.1| 828|Homo sapiens Hypothetical protein KI... 32 3.1
AF083956-1|AAC33124.1| 194|Homo sapiens Nip1 isoform s1 protein. 32 3.1
AB018335-1|BAA34512.2| 828|Homo sapiens KIAA0792 protein protein. 32 3.1
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 31 4.1
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 31 4.1
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 31 4.1
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 31 4.1
U15172-1|AAC00020.1| 228|Homo sapiens BCL2/adenovirus E1B 19kD-... 31 7.2
BC010959-1|AAH10959.1| 228|Homo sapiens BCL2/adenovirus E1B 19k... 31 7.2
AY246554-1|AAO61090.1| 271|Homo sapiens BCL2/adenovirus E1B 19k... 31 7.2
AY216799-1|AAO91805.1| 228|Homo sapiens transformation-related ... 31 7.2
AF083957-1|AAC33125.1| 271|Homo sapiens Nip1 isoform s2 protein. 31 7.2
>BC121023-1|AAI21024.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 105 bits (252), Expect = 2e-22
Identities = 57/172 (33%), Positives = 85/172 (49%)
Frame = +1
Query: 298 EVSDYIKKLGSQNWDYIRKEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDL 477
+V Y+++L + +R+EPERL EE L +QT++LAF NYKTF+ AE + I +
Sbjct: 45 DVGRYLRELSGSGLERLRREPERLAEERAQLLQQTRDLAFANYKTFIRGAECTERIHRLF 104
Query: 478 NRSKQSLQNFLDATPGFIEESERFSQMAGTIVKEKSRYSTIRNQSDKXXXXXXXPSLMRE 657
+ SL LD P F + F + A I + S N+ + P LM
Sbjct: 105 GDVEASLGRLLDRLPSFQQSCRNFVKEAEEISSNRRMNSLTLNRHTEILEILEIPQLMDT 164
Query: 658 ALNAEDYESALDIFTFVRNLSKRYSVIPIVQNTTNEIMTLWFETLYHLFNQL 813
+ YE AL++ +VR L ++YS IP++Q NE+ L L QL
Sbjct: 165 CVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQL 216
>BC121022-1|AAI21023.1| 612|Homo sapiens component of oligomeric
golgi complex 8 protein.
Length = 612
Score = 105 bits (252), Expect = 2e-22
Identities = 57/172 (33%), Positives = 85/172 (49%)
Frame = +1
Query: 298 EVSDYIKKLGSQNWDYIRKEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDL 477
+V Y+++L + +R+EPERL EE L +QT++LAF NYKTF+ AE + I +
Sbjct: 45 DVGRYLRELSGSGLERLRREPERLAEERAQLLQQTRDLAFANYKTFIRGAECTERIHRLF 104
Query: 478 NRSKQSLQNFLDATPGFIEESERFSQMAGTIVKEKSRYSTIRNQSDKXXXXXXXPSLMRE 657
+ SL LD P F + F + A I + S N+ + P LM
Sbjct: 105 GDVEASLGRLLDRLPSFQQSCRNFVKEAEEISSNRRMNSLTLNRHTEILEILEIPQLMDT 164
Query: 658 ALNAEDYESALDIFTFVRNLSKRYSVIPIVQNTTNEIMTLWFETLYHLFNQL 813
+ YE AL++ +VR L ++YS IP++Q NE+ L L QL
Sbjct: 165 CVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQL 216
>AK056344-1|BAB71157.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ31782 fis, clone NT2RI2008336, highly similar to
Homo sapiens component of oligomeric golgi complex 8
(COG8), ).
Length = 612
Score = 105 bits (252), Expect = 2e-22
Identities = 57/172 (33%), Positives = 85/172 (49%)
Frame = +1
Query: 298 EVSDYIKKLGSQNWDYIRKEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDL 477
+V Y+++L + +R+EPERL EE L +QT++LAF NYKTF+ AE + I +
Sbjct: 45 DVGRYLRELSGSGLERLRREPERLAEERAQLLQQTRDLAFANYKTFIRGAECTERIHRLF 104
Query: 478 NRSKQSLQNFLDATPGFIEESERFSQMAGTIVKEKSRYSTIRNQSDKXXXXXXXPSLMRE 657
+ SL LD P F + F + A I + S N+ + P LM
Sbjct: 105 GDVEASLGRLLDRLPSFQQSCRNFVKEAEEISSNRRMNSLTLNRHTEILEILEIPQLMDT 164
Query: 658 ALNAEDYESALDIFTFVRNLSKRYSVIPIVQNTTNEIMTLWFETLYHLFNQL 813
+ YE AL++ +VR L ++YS IP++Q NE+ L L QL
Sbjct: 165 CVRNSYYEEALELAAYVRRLERKYSSIPVIQGIVNEVRQSMQLMLSQLIQQL 216
>AF083958-1|AAC33126.1| 237|Homo sapiens Nip1 isoform s3 protein.
Length = 237
Score = 35.9 bits (79), Expect = 0.19
Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Frame = +1
Query: 157 VVPILNRRAHLHQ-----FQLSSSSTEMSQELKELCQLIFPSSPTENVIFFSEVSDYIKK 321
+ P+L +RA + F+L+ S T+ S + +SPT V F S++ K+
Sbjct: 58 IQPVLYQRAFIWTASTFFFKLTYSLTDFSSTQHDF------NSPTTPVTF-SDLEQLAKE 110
Query: 322 LGSQNW-DYIRKEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSKQSL 498
++ + +E E ++M T + + LA T+ ISR + + + +S++++
Sbjct: 111 QDKESEKQLLLQEVENHKKQMLRKTTK-ESLAQTSSTITESLMGISRMMAQQVQQSEEAM 169
Query: 499 QNFLDATPGFIEESERFSQMAGTI 570
Q+ + ++ ++ +E F M+GTI
Sbjct: 170 QSLVTSSRTILDANEEFKSMSGTI 193
>D26350-1|BAA05384.1| 2701|Homo sapiens type 2 inositol
1,4,5-trisphosphate receptor protein.
Length = 2701
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/76 (23%), Positives = 41/76 (53%)
Frame = +1
Query: 301 VSDYIKKLGSQNWDYIRKEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLN 480
V +Y+K++ +Q + + KE +LT E+ HL + L + + +F E ++RT++ L+
Sbjct: 838 VEEYLKEVVNQPFPFGDKEKNKLTFEVVHL---ARNLIYFGFYSFSELLRLTRTLLAILD 894
Query: 481 RSKQSLQNFLDATPGF 528
+ + ++ + F
Sbjct: 895 IVQAPMSSYFERLSKF 910
>BC130329-1|AAI30330.1| 536|Homo sapiens arylsulfatase family,
member K protein.
Length = 536
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 648 QRRQFKKF*QLITLISDSAISTFLFHNGTSHLRKPFALFNKTR 520
QRR+ K ++ ++SDS FH G+ ++ PF F KTR
Sbjct: 24 QRRRAAKAPNVVLVVSDSFDGRLTFHPGSQVVKLPFINFMKTR 66
>BC050392-1|AAH50392.1| 192|Homo sapiens ARSK protein protein.
Length = 192
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 648 QRRQFKKF*QLITLISDSAISTFLFHNGTSHLRKPFALFNKTR 520
QRR+ K ++ ++SDS FH G+ ++ PF F KTR
Sbjct: 63 QRRRAAKAPNVVLVVSDSFDGRLTFHPGSQVVKLPFINFMKTR 105
>BC036047-1|AAH36047.1| 542|Homo sapiens ARSK protein protein.
Length = 542
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 648 QRRQFKKF*QLITLISDSAISTFLFHNGTSHLRKPFALFNKTR 520
QRR+ K ++ ++SDS FH G+ ++ PF F KTR
Sbjct: 30 QRRRAAKAPNVVLVVSDSFDGRLTFHPGSQVVKLPFINFMKTR 72
>AY875939-1|AAW66667.1| 536|Homo sapiens arylsulfatase K protein.
Length = 536
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 648 QRRQFKKF*QLITLISDSAISTFLFHNGTSHLRKPFALFNKTR 520
QRR+ K ++ ++SDS FH G+ ++ PF F KTR
Sbjct: 24 QRRRAAKAPNVVLVVSDSFDGRLTFHPGSQVVKLPFINFMKTR 66
>AY358596-1|AAQ88959.1| 536|Homo sapiens Bone Rel Sulphatase
protein.
Length = 536
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -3
Query: 648 QRRQFKKF*QLITLISDSAISTFLFHNGTSHLRKPFALFNKTR 520
QRR+ K ++ ++SDS FH G+ ++ PF F KTR
Sbjct: 24 QRRRAAKAPNVVLVVSDSFDGRLTFHPGSQVVKLPFINFMKTR 66
>BC113811-1|AAI13812.1| 82|Homo sapiens TMEM63A protein protein.
Length = 82
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 7 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 50
>BC030245-1|AAH30245.1| 807|Homo sapiens transmembrane protein 63A
protein.
Length = 807
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 333 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 376
>AL591895-4|CAH71996.1| 807|Homo sapiens transmembrane protein 63A
protein.
Length = 807
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 333 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 376
>AL117348-2|CAI21798.1| 807|Homo sapiens transmembrane protein 63A
protein.
Length = 807
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 333 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 376
>AK222944-1|BAD96664.1| 828|Homo sapiens Hypothetical protein
KIAA0792 (Novel protein) variant protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 354 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 397
>AK222934-1|BAD96654.1| 828|Homo sapiens Hypothetical protein
KIAA0792 (Novel protein) variant protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 354 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 397
>AF083956-1|AAC33124.1| 194|Homo sapiens Nip1 isoform s1 protein.
Length = 194
Score = 31.9 bits (69), Expect = 3.1
Identities = 18/73 (24%), Positives = 40/73 (54%)
Frame = +1
Query: 352 KEPERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFI 531
+E E ++M T + + LA T+ ISR + + + +S++++Q+ + ++ +
Sbjct: 79 QEVENHKKQMLRKTTK-ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTIL 137
Query: 532 EESERFSQMAGTI 570
+ +E F M+GTI
Sbjct: 138 DANEEFKSMSGTI 150
>AB018335-1|BAA34512.2| 828|Homo sapiens KIAA0792 protein protein.
Length = 828
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 ERLTEEMKHLTEQTQELAFTNYKTFVETAEISRTIIKDLNRSK-QSLQ 501
ER+TEE +H+ +Q +AF TF E + ++ I+KD N K QSLQ
Sbjct: 354 ERITEEERHVQDQPLGMAFV---TFQEKS-MATYILKDFNACKCQSLQ 397
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 370 TEEMKHLTEQTQELAFTNYKTFVETAE-ISRTIIKDLNRSKQSLQNFLDATPGFIEESER 546
TEE KH T T+EL ET E + ++I + K+ + N + G +E
Sbjct: 589 TEEKKHRTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSHSGVLEIENS 648
Query: 547 FSQMAGTIVKEKSRYSTIRNQSDK 618
++ + + R ++ +Q ++
Sbjct: 649 VDDLSSRMDILEERIDSLEDQIEE 672
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 370 TEEMKHLTEQTQELAFTNYKTFVETAE-ISRTIIKDLNRSKQSLQNFLDATPGFIEESER 546
TEE KH T T+EL ET E + ++I + K+ + N + G +E
Sbjct: 589 TEEKKHRTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSHSGVLEIENS 648
Query: 547 FSQMAGTIVKEKSRYSTIRNQSDK 618
++ + + R ++ +Q ++
Sbjct: 649 VDDLSSRMDILEERIDSLEDQIEE 672
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 370 TEEMKHLTEQTQELAFTNYKTFVETAE-ISRTIIKDLNRSKQSLQNFLDATPGFIEESER 546
TEE KH T T+EL ET E + ++I + K+ + N + G +E
Sbjct: 589 TEEKKHRTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSHSGVLEIENS 648
Query: 547 FSQMAGTIVKEKSRYSTIRNQSDK 618
++ + + R ++ +Q ++
Sbjct: 649 VDDLSSRMDILEERIDSLEDQIEE 672
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 370 TEEMKHLTEQTQELAFTNYKTFVETAE-ISRTIIKDLNRSKQSLQNFLDATPGFIEESER 546
TEE KH T T+EL ET E + ++I + K+ + N + G +E
Sbjct: 589 TEEKKHRTLHTEELTSKEADLTEETEENLRSSVINSIREIKEEIGNLKSSHSGVLEIENS 648
Query: 547 FSQMAGTIVKEKSRYSTIRNQSDK 618
++ + + R ++ +Q ++
Sbjct: 649 VDDLSSRMDILEERIDSLEDQIEE 672
>U15172-1|AAC00020.1| 228|Homo sapiens BCL2/adenovirus E1B
19kD-interacting protein 1 protein.
Length = 228
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 403 QELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFIEESERFSQMAGTI 570
+ LA T+ ISR + + + +S++++Q+ + ++ ++ +E F M+GTI
Sbjct: 129 ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTI 184
>BC010959-1|AAH10959.1| 228|Homo sapiens BCL2/adenovirus E1B 19kDa
interacting protein 1 protein.
Length = 228
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 403 QELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFIEESERFSQMAGTI 570
+ LA T+ ISR + + + +S++++Q+ + ++ ++ +E F M+GTI
Sbjct: 129 ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTI 184
>AY246554-1|AAO61090.1| 271|Homo sapiens BCL2/adenovirus E1B 19kDa
interacting protein 1 protein.
Length = 271
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 403 QELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFIEESERFSQMAGTI 570
+ LA T+ ISR + + + +S++++Q+ + ++ ++ +E F M+GTI
Sbjct: 172 ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTI 227
>AY216799-1|AAO91805.1| 228|Homo sapiens transformation-related
gene 8 protein.
Length = 228
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 403 QELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFIEESERFSQMAGTI 570
+ LA T+ ISR + + + +S++++Q+ + ++ ++ +E F M+GTI
Sbjct: 129 ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTI 184
>AF083957-1|AAC33125.1| 271|Homo sapiens Nip1 isoform s2 protein.
Length = 271
Score = 30.7 bits (66), Expect = 7.2
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +1
Query: 403 QELAFTNYKTFVETAEISRTIIKDLNRSKQSLQNFLDATPGFIEESERFSQMAGTI 570
+ LA T+ ISR + + + +S++++Q+ + ++ ++ +E F M+GTI
Sbjct: 172 ESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTI 227
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,875,312
Number of Sequences: 237096
Number of extensions: 1790061
Number of successful extensions: 7074
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7073
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11039988564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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