Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_M12
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 61 7e-10
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 61 7e-10
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 60 2e-09
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 60 2e-09
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 54 1e-07
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 54 1e-07
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 49 4e-06
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 49 4e-06
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 36 0.032
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.69
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.69
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 31 0.69
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 31 0.69
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.69
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 31 0.69
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.91
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.91
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 30 1.6
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 30 1.6
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 1.6
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical p... 30 2.1
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 30 2.1
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 30 2.1
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 2.1
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 30 2.1
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 2.8
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 2.8
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 29 2.8
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 3.7
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 3.7
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 29 3.7
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 4.8
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 6.4
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 6.4
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 6.4
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 6.4
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 6.4
AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical ... 28 6.4
AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical ... 28 6.4
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 28 6.4
AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short i... 28 6.4
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 28 6.4
AB011382-1|BAA24982.1| 357|Caenorhabditis elegans RecA/Rad51/Dm... 28 6.4
Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 8.5
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 8.5
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 28 8.5
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 61.3 bits (142), Expect = 7e-10
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Frame = +1
Query: 214 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 393
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 394 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 573
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 574 ENFGLSN-------AQLERNKTKEQLEEEKKISLS-IRIKPLTIEGLSVDKLRQKAQELW 729
E+ G+ + A+ E TKEQ EE K ++++ IR + + ++ K +EL
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIRKSIAEASTILPNDMKAKIKELH 224
Query: 730 ECIVKLETXKYDLE 771
+ I KLE KYDLE
Sbjct: 225 QRICKLEAQKYDLE 238
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 61.3 bits (142), Expect = 7e-10
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 8/194 (4%)
Frame = +1
Query: 214 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSXXXXXXXX 393
EG+ + + + +D +L++Y R +R QA+RK++
Sbjct: 46 EGEKAMLAAKRRHENDEQAKLEDYEKARRSEREKEEEELEKLKEKQAQRKLAREQEEREA 105
Query: 394 XXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS 573
EEK+++ EE KK Q M+ + G NF IQKK
Sbjct: 106 AERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ-MMGGGFPGQQGGRNFVIQKKE 164
Query: 574 ENFGLSN-------AQLERNKTKEQLEEEKKISLS-IRIKPLTIEGLSVDKLRQKAQELW 729
E+ G+ + A+ E TKEQ EE K ++++ IR + + ++ K +EL
Sbjct: 165 ESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIRKSIAEASTILPNDMKAKIKELH 224
Query: 730 ECIVKLETXKYDLE 771
+ I KLE KYDLE
Sbjct: 225 QRICKLEAQKYDLE 238
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFG-LSNAQLERNKTKEQL 630
+++R R EE KK Q L + + G NFT+ KK+ + FG + A+ E TKEQ
Sbjct: 969 QDRRNREEEKNKKNQ--LSGFQTGGQGGRNFTVAKKAAQNDKFGNIVQAKQEMGMTKEQQ 1026
Query: 631 EEEKKISLS-IRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
E+ K+ L+ IR + + +L+ K +EL + I KLET KYDLE
Sbjct: 1027 EDAKRAFLAAIRKEIPNASEVPQSELKAKIKELHQRICKLETEKYDLE 1074
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 59.7 bits (138), Expect = 2e-09
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFG-LSNAQLERNKTKEQL 630
+++R R EE KK Q L + + G NFT+ KK+ + FG + A+ E TKEQ
Sbjct: 135 QDRRNREEEKNKKNQ--LSGFQTGGQGGRNFTVAKKAAQNDKFGNIVQAKQEMGMTKEQQ 192
Query: 631 EEEKKISLS-IRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
E+ K+ L+ IR + + +L+ K +EL + I KLET KYDLE
Sbjct: 193 EDAKRAFLAAIRKEIPNASEVPQSELKAKIKELHQRICKLETEKYDLE 240
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP---NFTIQKKSE---NFG-LSNAQLERNKTKE 624
EK ++ EE +++Q M + A+ P NFT+ K + NFG L+ TKE
Sbjct: 51 EKARKNEEKSRRQQMMAGSFAGAAVGAPGGKNFTVSNKGDQAANFGNLAQGAKAEGLTKE 110
Query: 625 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
Q E+ K+ L++ K + L + L+++ + + IVKLE KYDLE
Sbjct: 111 QQEDAKRAFLNVVCKAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLE 159
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/109 (33%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP---NFTIQKKSE---NFG-LSNAQLERNKTKE 624
EK ++ EE +++Q M + A+ P NFT+ K + NFG L+ TKE
Sbjct: 155 EKARKNEEKSRRQQMMAGSFAGAAVGAPGGKNFTVSNKGDQAANFGNLAQGAKAEGLTKE 214
Query: 625 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
Q E+ K+ L++ K + L + L+++ + + IVKLE KYDLE
Sbjct: 215 QQEDAKRAFLNVVCKAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLE 263
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 48.8 bits (111), Expect = 4e-06
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP--NFTIQKKSEN---FGLSNAQLERNK---TK 621
EK ++ EE +++Q M A + G NFT+ K + FG + AQ + K +K
Sbjct: 146 EKIRKNEEKVRRQQMMAGAFNGRVEAGAGRNFTVASKGDQAAQFG-NLAQAKGGKDVMSK 204
Query: 622 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
EQ+E+ K+ L+ + + GL + L+++ + L IVKLE KYDLE
Sbjct: 205 EQMEDAKRNFLAAVCRVQDVSGLLPNDLKERIRGLHARIVKLEAEKYDLE 254
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 48.8 bits (111), Expect = 4e-06
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP--NFTIQKKSEN---FGLSNAQLERNK---TK 621
EK ++ EE +++Q M A + G NFT+ K + FG + AQ + K +K
Sbjct: 146 EKIRKNEEKVRRQQMMAGAFNGRVEAGAGRNFTVASKGDQAAQFG-NLAQAKGGKDVMSK 204
Query: 622 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
EQ+E+ K+ L+ + + GL + L+++ + L IVKLE KYDLE
Sbjct: 205 EQMEDAKRNFLAAVCRVQDVSGLLPNDLKERIRGLHARIVKLEAEKYDLE 254
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 35.9 bits (79), Expect = 0.032
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
I K++ +E + + + A+ + T P+F+ +K S + + ++E+ K K+ +EE
Sbjct: 497 IRPKKKSTDEEKAIKSSSEPALSEQKSTEKPSFSTEKLSSD--SATTKIEKEKLKKAIEE 554
Query: 637 EKKISLSIRIKPLTIE-GLSVDKLRQKAQE 723
+++ L++ IK L E G + KL+ + +E
Sbjct: 555 QEEQELNVLIKQLQGEIGTKIAKLKDQWKE 584
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/95 (18%), Positives = 46/95 (48%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
++E ++++ E E++++ + K+ K QK+ E + E+ + +E +
Sbjct: 221 ELEREKEKSREKEREKEREKEREKEREKEREK---QKEREKEREKEREKEKKREEEARRK 277
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIV 741
+++ S + I+PL + + ++E+W C V
Sbjct: 278 KEEASTPVIIRPLLSQEDDDSNGSESSEEIWICPV 312
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLE 633
D EEK+++ E +KK+ A + KDA +K ++ G + + K K+ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 634 EEKKIS 651
E+KK++
Sbjct: 471 EKKKVA 476
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D EEK+++ E EKK+ A + KDA +K + + + + K+ EE
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEE 478
Query: 637 EKK 645
EKK
Sbjct: 479 EKK 481
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.69
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 633
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 648 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 702
Query: 634 EEKKISLSIRIKPLTIEGLSVDKLRQK 714
+ +K+S I K +E L + +R K
Sbjct: 703 QVEKVSNEISEKQQEVENLMAE-MRDK 728
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.69
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 633
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 634 EEKKISLSIRIKPLTIEGLSVDKLRQK 714
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L++
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 640 KKISLSI 660
+K+ I
Sbjct: 927 QKLEKDI 933
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E R+RLEEA K++A + K + K+ L QL + + +++ ++
Sbjct: 22 EVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAE-DLKRQQLLKEQERQKALADRT 80
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDL 768
ISL + + +G +L + +LW + +LE KYD+
Sbjct: 81 ISLP-NVDSIDDKG----QLEKIYNDLWARLTQLEEEKYDI 116
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.5 bits (68), Expect = 0.69
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E+R++LEE+E RQA L +++ E L +LE K + + +++
Sbjct: 337 ERRRKLEESETARQAELDRQATIYAEQERMAMERNRE---LERIRLEEKKRENERVRQEE 393
Query: 646 ISLSIRIKPLTIEGLSVDKLRQ 711
I++ I K +E L +++ R+
Sbjct: 394 IAMEIS-KIRELERLQLERQRK 414
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.69
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 633
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 634 EEKKISLSIRIKPLTIEGLSVDKLRQK 714
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E R+RLEEA K++A + K + K+ L QL + + +++ ++
Sbjct: 22 EVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAE-DLKRQQLLKEQERQKALADRT 80
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDL 768
ISL + + +G +L + +LW + +LE KYD+
Sbjct: 81 ISLP-NVDSIDDKG----QLEKIYNDLWARLTQLEEEKYDI 116
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 726
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 726
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 636
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 637 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 717
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 636
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 637 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 717
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
EE+ R++E E+K++ +L+ ++A K + K+E E K K++LEEE+
Sbjct: 531 EEEEARIKEEEEKQRKILE--EEARKKQEEEEARLKAEE---ELKIYEEEKRKKELEEER 585
Query: 643 KISLSIRIK 669
K + IK
Sbjct: 586 KKKEELEIK 594
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
K+Q EEA K + L+ ++ + +KK E + + E K K+ LEEEKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
E++R+ LEE +K+Q +A A + + +K+ + + E + K + EEEK
Sbjct: 542 EKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 643 K 645
K
Sbjct: 602 K 602
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 640 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 720
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 640 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 720
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 255 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 314
Query: 640 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 720
K K + + +E L L+++A+
Sbjct: 315 KSKFDAEVALHHEEVEDLRKKMLQKQAE 342
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFGLSNAQLERNKT--KEQLE 633
KR+ ++ AEK ++A L+ K++SK+ +KK ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 634 EEKKI 648
EKK+
Sbjct: 383 SEKKV 387
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 639
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 640 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 738
LS + L E S D+L+ +E + +
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKERMQAL 463
>Z14092-10|CAA78472.2| 1020|Caenorhabditis elegans Hypothetical
protein R107.6 protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 622 EQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
E+ +E K SL +++ EGL D+L +L C++K
Sbjct: 920 EEKAQEPKASLVLKMMTRLFEGLQADELSPVVDDLAPCVIK 960
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/105 (19%), Positives = 56/105 (53%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E +++LEE+E ++ +LQ+ K + + +++ ++ +++ + K + Q+ E
Sbjct: 1397 DVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKKFESQMAE 1456
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
E+ ++++ L + +S +LR + + + +++ K LE
Sbjct: 1457 ER---VAVQKALLDRDAMS-QELRDRETRVLSLLNEVDIMKEHLE 1497
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 29.9 bits (64), Expect = 2.1
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQK----KSENFGLSNAQLERNKTKE 624
++E+ R+ L EAEKK+ +L A + K + I + K+E + N E + E
Sbjct: 150 EMEKIREELLEAEKKKNDLL-AKQSIRKRHEHELINEQSNAKAELKNVVNEYTETRQINE 208
Query: 625 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
+L+++K+ ++ + I+ L E L+ K + E E + E K ++E
Sbjct: 209 ELDKQKEEAI-LHIQALEKEMLTGKKTIEHLNE--EVLTSPEQLKQEME 254
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/87 (20%), Positives = 43/87 (49%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
+ +Q+LEE EK+ Q +L+ ++ + Q + +L+R + +Q +E+
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEMKQQNQER 262
Query: 643 KISLSIRIKPLTIEGLSVDKLRQKAQE 723
+ ++ + +E L +KL +K ++
Sbjct: 263 EKLIADDFEKRKLEKLQREKLFEKNKQ 289
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 639
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 640 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 738
LS + L E S D+L+ +E + +
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKERMQAL 463
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNFTIQKKSENFGLSNAQLERNKTKE 624
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 625 Q 627
Q
Sbjct: 268 Q 268
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/87 (19%), Positives = 43/87 (49%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
++KR+++EE EK+R + +++ +K+ + +L++ +++ +EEK
Sbjct: 94 KQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEK 153
Query: 643 KISLSIRIKPLTIEGLSVDKLRQKAQE 723
+ + K E + D+ R K ++
Sbjct: 154 RKEAEEKKKKDEEEKMKKDEERNKRKK 180
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF------GLSNAQLERNKTKEQL 630
KRQ LE +KRQ +K++ K G + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 631 EEEKKISLSIRIKPLTIEGLSVDK 702
KK+ L+ K + +DK
Sbjct: 139 SPSKKVILNDIYKDIPSTSTYLDK 162
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 639
+E+ +L + +Q +++ +T T +++S + +SN QLE + +E LEEE
Sbjct: 1301 LEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQLECEQFRESLEEE 1360
Query: 640 KKISLSIR 663
+ ++
Sbjct: 1361 QDAKTDVQ 1368
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 642
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E+EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 643 K 645
K
Sbjct: 181 K 181
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NFTIQKKSENFGLSNAQLERNKTKEQLE 633
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNLI 279
Query: 634 EEKKISLSIR--IKPLTIEGLS 693
+ + S I+ L + GLS
Sbjct: 280 SGRDFAASSSKIIQVLQVLGLS 301
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER 609
D E+ ++ ++E EK + L S GP T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 463 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 624
+EK+Q+L+E EK+R+ + Q ++ ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E+R R+EE E+ + + ++ K ++K+E E K K LEEE +
Sbjct: 422 ERRWRIEEEERLEEIRRKKEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEME 481
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQE 723
+ + +E ++R+KA++
Sbjct: 482 MKRKNEEAKIKLEA----EMREKAEQ 503
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 460 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTI-QKKSENFGLSNAQLERNKTKEQLEE 636
++ +RQ L + R+ L A+ + K F Q++ L ++E ++TKE+LE+
Sbjct: 38 VDLQRQWLTDYHDSREKSLVALTE--KLHQEFMEDQERVRRDLLVQFKIELDQTKEELEK 95
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWEC 735
+ +L I+ L+ + + +K Q W+C
Sbjct: 96 KHAENLKEEIEKLSEKHQRELAVAKKKQWCWQC 128
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
++ + L E L + +K +E W+ + + + + E
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWDRLESIRLAEEEAE 361
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
++ + L E L + +K +E W+ + + + + E
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWDRLESIRLAEEEAE 361
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
++ + L E L + +K +E W+ + + + + E
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWDRLESIRLAEEEAE 361
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/105 (20%), Positives = 47/105 (44%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 637 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDLE 771
++ + L E L + +K +E W+ + + + + E
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWDRLESIRLAEEEAE 361
>AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical
protein Y57A10A.9 protein.
Length = 158
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--------IQKKSENFGLSNAQLERNKTK 621
+K +RL E ++ + Q M++ASK F +QK++ENF + Q + +
Sbjct: 84 QKLRRLAAQELEQDVVEQKMREASKNKVLFANVLNIFADLQKEAENFSKTTKQSSTSPSS 143
Query: 622 EQLEEEKKISLS 657
EE S S
Sbjct: 144 SSSSEESSASSS 155
>AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical
protein Y43C5A.6b protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 630
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 631 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 723
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 630
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 42 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 101
Query: 631 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 723
E ++ + R + ++G+S K + +E
Sbjct: 102 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 131
>AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short
isoform protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 630
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 631 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 723
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 469 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 648
KRQ+ + +KK ++ A +K+G + KS +Q KEQ E+KK+
Sbjct: 65 KRQQNSKRQKKIKSNSAAPAPPAKSG----VPAKSAEKAKEGSQRSARLKKEQKSEKKKV 120
Query: 649 SLSIRIKPLTIEGLSVDK 702
+ +R E L K
Sbjct: 121 CVDLRSTVYIYEALLFQK 138
>AB011382-1|BAA24982.1| 357|Caenorhabditis elegans
RecA/Rad51/Dmc1-like protein protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 463 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 630
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 631 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 723
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical
protein B0024.10 protein.
Length = 552
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 586 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 732
LS+ +L + K Q E E+K +L + L E D+L + QE ++
Sbjct: 146 LSDQELATMQAKLQEENERKKALDVNFVKLKAENAERDRLERLRQEAFD 194
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E R+RLEEA +K+Q + K + K +E+ L QL + + + ++ E+
Sbjct: 35 EVRKRLEEAGQKKQKKGFLTPERKKKLRKLLMNKAAED--LKTQQLRKEQERVKVLAERT 92
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDL 768
++L + + KL +L+ + LE KYD+
Sbjct: 93 VALP-NVDSIDDHA----KLEAIYNDLFSRLCNLEEEKYDI 128
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
EK++R EEA+K R+ + + Q + E + AQ E + K +LE E++
Sbjct: 325 EKKEREEEAKKNRE------RQEKERQAEVERQAELERQRIIEAQREEEEKKRRLEMERR 378
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQE 723
+++ + +E V +++ + E
Sbjct: 379 REEDEKMRKVQMEKAKVKQMQVQMPE 404
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 3168 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 3227
Query: 637 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
K++ S +I P + + K KA+EL + + K
Sbjct: 3228 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQALEK 3262
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 5025 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5084
Query: 637 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
K++ S +I P + + K KA+EL + + K
Sbjct: 5085 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQALEK 5119
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 5928 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5987
Query: 637 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
K++ S +I P + + K KA+EL + + K
Sbjct: 5988 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQALEK 6022
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 6831 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 6890
Query: 637 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
K++ S +I P + + K KA+EL + + K
Sbjct: 6891 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQALEK 6925
Score = 27.9 bits (59), Expect = 8.5
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Frame = +1
Query: 457 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 636
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 7734 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 7793
Query: 637 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECIVK 744
K++ S +I P + + K KA+EL + + K
Sbjct: 7794 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQALEK 7828
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 27.9 bits (59), Expect = 8.5
Identities = 25/101 (24%), Positives = 46/101 (45%)
Frame = +1
Query: 466 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 645
E R+RLEEA +K+Q + K + K +E+ L QL + + + ++ E+
Sbjct: 35 EVRKRLEEAGQKKQKKGFLTPERKKKLRKLLMNKAAED--LKTQQLRKEQERVKVLAERT 92
Query: 646 ISLSIRIKPLTIEGLSVDKLRQKAQELWECIVKLETXKYDL 768
++L + + KL +L+ + LE KYD+
Sbjct: 93 VALP-NVDSIDDHA----KLEAIYNDLFSRLCNLEEEKYDI 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.130 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,225,388
Number of Sequences: 27780
Number of extensions: 178565
Number of successful extensions: 751
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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