Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M10
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    28   0.087
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    21   7.6  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    21   7.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   7.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   7.6  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    21   7.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 126 YDLDI*PFDSHVGHRCPTYGSNYVD 52
           Y L   PFD H+  + PT  SNY++
Sbjct: 882 YALKFFPFDKHILDKLPTLISNYIE 906


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 92  YNYNNNYNNYNKHNY 106


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 325 YNYNNNYNNYNKHNY 339


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 21  YNVLLNSRNRNRHNY 65
           YN   N  N N+HNY
Sbjct: 325 YNYNNNYNNYNKHNY 339


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 87  HRCPTYGSNYVDFCS*SLGAHCILCI 10
           H   TY ++ V +   SLG   +LCI
Sbjct: 150 HAVDTYAASVVGYLLYSLGQVFMLCI 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,028
Number of Sequences: 438
Number of extensions: 3291
Number of successful extensions: 22
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)