Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_M06
(791 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 43 3e-04
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.066
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 32 0.46
SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_39611| Best HMM Match : TEP1_N (HMM E-Value=0.67) 31 1.1
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 31 1.4
SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12) 31 1.4
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 30 2.5
SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_57373| Best HMM Match : DUF292 (HMM E-Value=4.7) 29 4.3
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 29 4.3
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_51458| Best HMM Match : CAMP_factor (HMM E-Value=7.4) 28 10.0
SB_51309| Best HMM Match : LicD (HMM E-Value=0.0069) 28 10.0
SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08) 28 10.0
SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27) 28 10.0
SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82) 28 10.0
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 50.8 bits (116), Expect = 1e-06
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Frame = +2
Query: 92 EPLDWPGTYHFEAVRMSISAGNVQD-YSVW-KTNHS-SRVDYNKGAVKSIIVDENAKYRY 262
+P +P YH ++ + +++ + VW H+ SR+DY G ++ + +
Sbjct: 44 KPFHFPRNYHATG-KLQLPHSKIEEPFEVWFSAQHNRSRIDYYYGTDRTFQRADVGPH-- 100
Query: 263 GVSYEIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDNFEYVGPDSQTVENTIKFV 442
G +++I P D + C + G+E ++ I+P +F++ G + +T K+
Sbjct: 101 GEAFKIVPIYTDEKGGYIGCWHLEGTERTPIVVQPIVPNMTDFKFAGYEVYHGASTAKWE 160
Query: 443 AEDSDLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNF 601
TIW T + PVRYE+K Y+ LL + + +Y +F
Sbjct: 161 YRYLAFGLMNAHTIWVTTADPPR---PVRYEMKGYDNLLASYYDNYVLEYISF 210
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 42.7 bits (96), Expect = 3e-04
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 8/175 (4%)
Frame = +2
Query: 101 DWPGTYHFEAVRMSISAGNVQD-YSVW--KTNHSSRVDYNKGAVKSIIVDENAKYRYGVS 271
D P YH + + N+++ + W + + SR+DY G K+ YGV
Sbjct: 1015 DLPSAYHAIGT-LHLPYDNIREPFESWYARDYNMSRIDYYYGMDKTF--QRGDLMDYGVL 1071
Query: 272 YEIHP----ETDDGEDAIFKCNVMLGSEDNIFDLKIILP-ETDNFEYVGPDSQTVENTIK 436
++ P +D + C G + + +LP ++F+++G + ++ T K
Sbjct: 1072 VKVVPAHWGRDEDLDKNTISCWYRPGFRWSQQRGQSVLPAHLEHFKFIGEEIRSGMPTFK 1131
Query: 437 FVAEDSDLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNF 601
+ + K T W T K P+RY + Y+ LL H + DY +F
Sbjct: 1132 YQRNTTIFHKKNSYTFWMT---KAKPHRPLRYVMHGYDTLLNSFYDHYVMDYLSF 1183
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 35.9 bits (79), Expect = 0.038
Identities = 53/258 (20%), Positives = 98/258 (37%), Gaps = 7/258 (2%)
Frame = +2
Query: 38 LLIF-GLPFVAAATIDLKDEPLDWPGTYHFEAVRMSISAGNVQDYSVWKTN--HSSRVDY 208
LL+F L A LK P WP Y V A + + W SR+DY
Sbjct: 319 LLVFVALSSSLAKPTGLKTPPT-WPQEYTLTGVLRLPYAEIEEPFQAWFDGGRKRSRIDY 377
Query: 209 NKGAVKSIIVDENAKYRYGVSYEIHPETDDGEDAIFKCNVMLGSEDNIFDLKIILPETDN 388
G + G ++ I P + + + + C G+ + + +LP+
Sbjct: 378 YGGMDSTF--QRGDILTAGANFRICPMSTETKLNVRSCFQTNGTSASPVGPQSVLPDLAK 435
Query: 389 FEYVGPDSQTVENTIKFVAEDSDLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGL- 565
F +VG + +K + L + + Y ++ P+ YE+ +++L+G
Sbjct: 436 FSFVG---NSTYGDVKCSIWEYKLTVGHKRNKYTMYTSMHDPPAPIHYEMLGFDDLIGSH 492
Query: 566 LEKHEIWDYFNFN-TGFDKSAFDVSQ-YDCDD-ENVEEHTLQSETVTKFLMFMDPENDKH 736
+++E+ DY N++ + F + C + +S F++ N +
Sbjct: 493 YDQYEL-DYSNYSPQAPPEEVFQTPEGLVCTGFPGPGDDDEKSIINNPMQEFVEMHNVEK 551
Query: 737 VDHVFNSFKNKFVXNYAD 790
V VF+ + K NY D
Sbjct: 552 VHRVFDKYVKKHKKNYKD 569
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 485 WATYDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDV 634
+ Y + + PVRYE+ Y+ LL H I DY NF+ + S F++
Sbjct: 28 YTLYTTPSRPYTPVRYEMMGYDTLLSSYYDHYILDYHNFSAWKYQYSVFEI 78
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 32.3 bits (70), Expect = 0.46
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Frame = -3
Query: 723 SGSMNMRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL* 544
+ S ++ + +T+S T SSS S +LTS + LS V S +S F S +S
Sbjct: 539 TSSSSLSDFLTLSSLLSDFLTSSSSLSVFLTSSSSLS--VFLTSSSSLSDFLTSSSSLSV 596
Query: 543 FLTSYLTGCQLLFFSS*VAQIVFIVLVSKSLSSATNLIVFSTVCESGPTY--SKLSVSGK 370
FLTS L SS L S L+S+++L VF T + S S+S
Sbjct: 597 FLTSSSLPSDFLTSSS---------LPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSLSDF 647
Query: 369 IIFKSNILSSDPSITLHLKIASSPSSVSGWISYETPYLYFAFSSTII 229
+ S++ S +L +S SS S ++S + F SS+++
Sbjct: 648 LTSSSSLSVFPTSSSLPSDFLTSSSSPSDFLSSSSLPSDFLTSSSLL 694
Score = 31.1 bits (67), Expect = 1.1
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 8/180 (4%)
Frame = -3
Query: 723 SGSMNMRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL* 544
S S ++ + +T S T SSS S +LTS + LS+ + S +S F S +S
Sbjct: 379 SSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSS--SSLSDFLTSSSSLSD 436
Query: 543 FLTS------YLTGCQLL--FFSS*VAQIVFIVLVSKSLSSATNLIVFSTVCESGPTYSK 388
FLTS +LT C L F +S + VF S T+ + S S + S
Sbjct: 437 FLTSSSSLSDFLTSCSSLSDFLTSSSSLSVFPTPSSLPSDFLTSSSLPSDFLTSSSSLSD 496
Query: 387 LSVSGKIIFKSNILSSDPSITLHLKIASSPSSVSGWISYETPYLYFAFSSTIILFTAPLL 208
S + S+ L+S S+++ +S PS S + +L + S + L + LL
Sbjct: 497 FLTSSSSL--SDFLTSSSSLSVFYTSSSLPSDFLTSSSLPSDFLTSSSSLSDFLTLSSLL 554
Score = 28.3 bits (60), Expect = 7.5
Identities = 42/143 (29%), Positives = 64/143 (44%)
Frame = -3
Query: 723 SGSMNMRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL* 544
+ S ++ + +T+S T SSS S +LTS + LS V S +S F S +S
Sbjct: 784 TSSSSLSDFLTLSSLLSDFLTSSSSLSVFLTSSSSLS--VFLTSSSSLSDFLTSSSSLSD 841
Query: 543 FLTSYLTGCQLLFFSS*VAQIVFIVLVSKSLSSATNLIVFSTVCESGPTYSKLSVSGKII 364
FLTS + L SS ++ VF S T+ + S S + S S +
Sbjct: 842 FLTSSSSLSDFLTSSSSLS--VFPTSSSLPSDFLTSSSLPSDFLTSSSSLSVFPTSSSL- 898
Query: 363 FKSNILSSDPSITLHLKIASSPS 295
S+ L+S S++ L +SS S
Sbjct: 899 -PSDFLTSSSSLSDFLTSSSSLS 920
Score = 27.9 bits (59), Expect = 10.0
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Frame = -3
Query: 723 SGSMNMRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL* 544
S S ++ + +T S T SSS S +LTS + LS+ + S +S F S +S
Sbjct: 1054 SSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSS--SSLSDFLTSSSSLSD 1111
Query: 543 FLTSYLTGCQLLFFSS*VAQ-IVFIVLVSKSLSSATNLIVFSTVCESGPTYSKLSVS-GK 370
FLTS + L SS ++ + +S L+ +++L VF T + S S
Sbjct: 1112 FLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTWSSSLSVFLTSSSLPSDFLTSSSSLSD 1171
Query: 369 IIFKSNILSSDPSITLHLKIASSPSSV-SGWI-SYETPYLYFAFSSTIILF 223
+ S++LS + + L + + SS+ S ++ S P + SS++ +F
Sbjct: 1172 FLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSSSLPSDFLTSSSSLSVF 1222
>SB_49462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 494 YDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDVSQYDCD-DENVE 667
Y K + P+R E+ Y+ +L + DY FN +DK FD+ D D DE +
Sbjct: 432 YATKTDPPLPMRLEMDGYDTVLVSYYDSYVIDYHTFNKWTYDKGIFDIPHLDDDFDEFRQ 491
Query: 668 EH 673
+H
Sbjct: 492 QH 493
>SB_39611| Best HMM Match : TEP1_N (HMM E-Value=0.67)
Length = 565
Score = 31.1 bits (67), Expect = 1.1
Identities = 25/97 (25%), Positives = 52/97 (53%)
Frame = -2
Query: 544 VFDFISDWMPIIVFLVIGSPNSLYCLSLQIAIFSDELDSVFNGL*IWSDVFKVVGFWQDN 365
+ +F+SD++ I+ ++ + + +S I+IFSD ++ V + + I SD+ +V
Sbjct: 320 IINFVSDFISIVSDIISIVSDIISIVSDIISIFSDIINIVSDIINIVSDIINIVS--DII 377
Query: 364 L*VEYIIFRSKHYITLENRIFTIVSFWVDLI*DSVSV 254
V II I++ + I +IVS + ++ D +S+
Sbjct: 378 SIVSDIISIVSDIISIVSDIISIVSDIISIVSDIISI 414
Score = 28.7 bits (61), Expect = 5.7
Identities = 25/98 (25%), Positives = 54/98 (55%)
Frame = -2
Query: 544 VFDFISDWMPIIVFLVIGSPNSLYCLSLQIAIFSDELDSVFNGL*IWSDVFKVVGFWQDN 365
+ + +SD + I+ ++ + + +S I+I SD ++ V + + I SD+ +V N
Sbjct: 257 IINIVSDIINIVSDIINIVSDIISIVSDIISIVSDIINIVSDIINIVSDIINIVSDII-N 315
Query: 364 L*VEYIIFRSKHYITLENRIFTIVSFWVDLI*DSVSVF 251
+ + I F S +I++ + I +IVS + ++ D +S+F
Sbjct: 316 IVSDIINFVSD-FISIVSDIISIVSDIISIVSDIISIF 352
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Frame = +2
Query: 497 DEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNTGFDK-SAFDVSQ-----YDCDDE 658
DE ++H YEV NY+ ++ L + + D NF+T K F V++ D +E
Sbjct: 188 DEMELDFHEDHYEVMNYDLIINLPGQESVLDVTNFDTFLAKVMDFGVAEGRFIKEDDYNE 247
Query: 659 NVEEHTLQS-ETVTKFLMFMD 718
N +E + S ETV + +D
Sbjct: 248 NTDESFVVSPETVLRNCNLVD 268
>SB_17727| Best HMM Match : Exo_endo_phos (HMM E-Value=2.4e-12)
Length = 648
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 545 YNELLGLLEKHEIWDYFNFNTGFDKS 622
YN+L+ LEKH+I Y NFN F K+
Sbjct: 618 YNQLIFFLEKHKI--YLNFNLDFGKA 641
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 494 YDEKNNNWHPVRYEVKNYNELLGLLEKHEIWDYFNFNT-GFDKSAFDV 634
Y+ K + P+R E+ YN +L + DY FN +DK FD+
Sbjct: 1110 YNTKTDPPLPMRLEMDGYNTVLVSYYDSYVIDYHTFNKWTYDKGIFDI 1157
>SB_23199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 29.5 bits (63), Expect = 3.3
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 203 DYNKGAVKSIIVDENAKYRYGVSYEIHPETDDGEDAIFKCNVMLGSEDNIF--DLKIILP 376
DY+ G D N + + + EIH + D +D + C+ + + ++ +LP
Sbjct: 204 DYDDGDYDDDDDDANDEMIFIYADEIHVDVDANDDDKYYCDANISKASTLLGHHIRGLLP 263
Query: 377 ETDNFEYVGPDSQTVENTIKFVAEDSDLETKTI 475
F V D +TV++ + +D ++T+
Sbjct: 264 HLSCFA-VDDDDETVDHDADYYYDDEAKISRTL 295
>SB_57373| Best HMM Match : DUF292 (HMM E-Value=4.7)
Length = 383
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -3
Query: 480 VFIVLVSKSLSSATNLIVFSTVCESGPTYSKLSVSGKIIFKSNILSSDPSITLHLKIASS 301
+F+++V +SL L ++ C +Y ++ + F ++LS I LH+ + S
Sbjct: 303 MFLLIVLESLFYPFLLPLYCCTCSD--SYFTFMLNPVVRFTKDLLSQLAFIGLHMAVCLS 360
Query: 300 PSSV 289
PSSV
Sbjct: 361 PSSV 364
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 702 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 547
++V++S+ S+++ S W+T+ ++P+ LK + ++P SSL
Sbjct: 748 SMVSLSVATTPCSSWTRSVFSWMTASISATDPIASLKPFSFATSCRTPPSSL 799
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 702 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 547
++V++S+ S+++ S W+T+ ++P+ LK + ++P SSL
Sbjct: 654 SMVSLSVATTPCSSWTRSVFSWMTASISATDPIASLKPLSFATSCRTPPSSL 705
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -3
Query: 702 NLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVLKLK*SQISCFSKSPNSSL 547
++V++S+ S++ S W+T+ ++P+ LK + + ++P SSL
Sbjct: 852 SMVSLSVATTPYSSWIHSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSL 903
>SB_51458| Best HMM Match : CAMP_factor (HMM E-Value=7.4)
Length = 351
Score = 27.9 bits (59), Expect = 10.0
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +2
Query: 395 YVGPDSQTVENTIKFVAEDS-DLETKTIKTIWATYDEKNNNWHPVRYEVKNYNELLGLLE 571
+VG + TV N +A S + +K KT A D HP + + GL +
Sbjct: 32 FVGGNGPTVINPDPIIATSSKETTSKVNKTRKAPKDRTLLLGHPSSTRKRKLGDDTGLYD 91
Query: 572 KHEIWDYFNFNTGFDKSAFDVSQYDCDDENVEEHTLQSETVTKF 703
+ F + + D +Q + DD+N+E ET T +
Sbjct: 92 NN-----FESQDEDESCSRDDTQLEIDDQNLEPFQKDQETQTVY 130
>SB_51309| Best HMM Match : LicD (HMM E-Value=0.0069)
Length = 466
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 150 PATYKTTRYGKQIIRHAST 206
PA Y +RYGK+I++H+ +
Sbjct: 404 PAMYARSRYGKEILKHSQS 422
>SB_24185| Best HMM Match : 7tm_1 (HMM E-Value=6.3e-08)
Length = 774
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Frame = -2
Query: 487 PNSLYCLSLQIAIFSDELDS--VFNGL*IWSDVFKVVGF--WQDNL*VEYIIFRSKHYIT 320
P++++ L L +A ++ L + + +G+ + F V+ F W L + Y R+ +Y+T
Sbjct: 258 PSTVFILGLCVADYNTVLRAGGIISGV-TMNVSFLVILFLSWSQLLAIVYP-HRNNNYVT 315
Query: 319 LENRIFTIVSFWV 281
E + +VS WV
Sbjct: 316 KERAVICVVSIWV 328
>SB_39659| Best HMM Match : 7tm_1 (HMM E-Value=5.7e-27)
Length = 334
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 708 MRNLVTVSLCNVCSSTFSSSQSYWLTSKADLSNPVL 601
M +LV + CS+ F+ + +YW ++ D +P+L
Sbjct: 236 MNSLVVYFVFVACSTPFACALAYWEVTQNDYLSPIL 271
>SB_37049| Best HMM Match : Acylphosphatase (HMM E-Value=0.82)
Length = 646
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 526 DWMPIIVFLVIGSPNSLYCLSLQIAIFSDELD 431
DW + ++LVI + L L+L IA+F+ L+
Sbjct: 416 DWRKVKIYLVIANFAMLAALALTIALFASNLN 447
>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 836
Score = 27.9 bits (59), Expect = 10.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = -3
Query: 330 ITLHLKIASSPSSVSGWISYETPYLYFAFSST---IILFTAPLL*ST 199
I + ++ SSPS+ S + + PY Y + +T IIL TAP ST
Sbjct: 698 IIILIRAPSSPSTSSSQLHHHHPYHYHSAITTIHIIILITAPSSPST 744
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,793,746
Number of Sequences: 59808
Number of extensions: 499799
Number of successful extensions: 1311
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1304
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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