Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M03
         (365 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X01802-1|CAA25933.1|   96|Drosophila melanogaster protein ( Dros...    28   4.3  
L08852-1|AAC37200.1|  119|Drosophila melanogaster vitelline memb...    28   4.3  
BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p pro...    27   5.7  
AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p pro...    27   5.7  
AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA...    27   5.7  

>X01802-1|CAA25933.1|   96|Drosophila melanogaster protein (
           Drosophila melanogastermRNA fragment for vitelline. ).
          Length = 96

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 8   PTXSQPTASQPTVLAPAAPTISAGDI 85
           P+ S P A+ P + APAAP+ +A  +
Sbjct: 43  PSYSAPAAASPGLRAPAAPSYAAAPV 68


>L08852-1|AAC37200.1|  119|Drosophila melanogaster vitelline
           membrane protein protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 8   PTXSQPTASQPTVLAPAAPTISAGDI 85
           P+ S P A+ P + APAAP+ +A  +
Sbjct: 43  PSYSAPAAASPGLRAPAAPSYAAAPV 68


>BT016018-1|AAV36903.1|  463|Drosophila melanogaster RE19971p
           protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  AGDIHGAA-IDAHVEASDHVRAXADAXREQHDQAAEIHGXAVNAAVDHSWQAVXAVKTVE 250
           A  + GAA   AH  A       +DA    HD A ++ G   NAA + +  A  A   V 
Sbjct: 187 ASSVAGAAGTIAHDAAGAASSVASDAGHIFHD-AGKVGGDIGNAAGNVAGSAANAAGNVA 245

Query: 251 AKLDGAAG 274
           + + GAAG
Sbjct: 246 SSVAGAAG 253



 Score = 26.6 bits (56), Expect = 10.0
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 71  SAGDI-HGAAIDAHVEASDHVRAXADAXREQHD---QAAEIHGXAVNAAVDHSWQAVXAV 238
           +AG I H AA  A   ASD      DA +   D    A  + G A NAA D +  A  A 
Sbjct: 251 AAGTIAHDAAGAASSVASDAGHIFHDAGKVGGDIGSAAGNVAGDASNAAGDVAHDAANAA 310

Query: 239 KTVEAKLDGAAG 274
            +V      AAG
Sbjct: 311 GSVAGSAANAAG 322


>AY061535-1|AAL29083.1|  388|Drosophila melanogaster LP01629p
           protein.
          Length = 388

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  AGDIHGAA-IDAHVEASDHVRAXADAXREQHDQAAEIHGXAVNAAVDHSWQAVXAVKTVE 250
           A  + GAA   AH  A       +DA    HD A ++ G   NAA + +  A  A   V 
Sbjct: 112 ASSVAGAAGTIAHDAAGAASSVASDAGHIFHD-AGKVGGDIGNAAGNVAGSAANAAGNVA 170

Query: 251 AKLDGAAG 274
           + + GAAG
Sbjct: 171 SSVAGAAG 178



 Score = 26.6 bits (56), Expect = 10.0
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 71  SAGDI-HGAAIDAHVEASDHVRAXADAXREQHD---QAAEIHGXAVNAAVDHSWQAVXAV 238
           +AG I H AA  A   ASD      DA +   D    A  + G A NAA D +  A  A 
Sbjct: 176 AAGTIAHDAAGAASSVASDAGHIFHDAGKVGGDIGSAAGNVAGDASNAAGDVAHDAANAA 235

Query: 239 KTVEAKLDGAAG 274
            +V      AAG
Sbjct: 236 GSVAGSAANAAG 247


>AE014297-4573|AAF57031.3|  476|Drosophila melanogaster CG9682-PA
           protein.
          Length = 476

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  AGDIHGAA-IDAHVEASDHVRAXADAXREQHDQAAEIHGXAVNAAVDHSWQAVXAVKTVE 250
           A  + GAA   AH  A       +DA    HD A ++ G   NAA + +  A  A   V 
Sbjct: 200 ASSVAGAAGTIAHDAAGAASSVASDAGHIFHD-AGKVGGDIGNAAGNVAGSAANAAGNVA 258

Query: 251 AKLDGAAG 274
           + + GAAG
Sbjct: 259 SSVAGAAG 266



 Score = 26.6 bits (56), Expect = 10.0
 Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
 Frame = +2

Query: 71  SAGDI-HGAAIDAHVEASDHVRAXADAXREQHD---QAAEIHGXAVNAAVDHSWQAVXAV 238
           +AG I H AA  A   ASD      DA +   D    A  + G A NAA D +  A  A 
Sbjct: 264 AAGTIAHDAAGAASSVASDAGHIFHDAGKVGGDIGSAAGNVAGDASNAAGDVAHDAANAA 323

Query: 239 KTVEAKLDGAAG 274
            +V      AAG
Sbjct: 324 GSVAGSAANAAG 335


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,020,301
Number of Sequences: 53049
Number of extensions: 156021
Number of successful extensions: 1261
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)