Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M01
         (341 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   0.78 
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    25   0.78 
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   1.8  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    22   7.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    22   7.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   7.2  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            21   9.6  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 226 HPDAVPKISCLVAEVLPISAM 164
           HP  VPK  C   +++PIS +
Sbjct: 393 HPTKVPKPCCAPTKLIPISVL 413


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 260 SSSCWTWRW 286
           S SCW WRW
Sbjct: 4   SRSCWWWRW 12


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 232 VIHPDAVPKISCLVAEVLPISAM 164
           ++HP  VPK  C   ++ PIS +
Sbjct: 395 LMHPTRVPKPCCAPTKLNPISVL 417


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 229 IHPDAVPKISCLVAEVLPISA 167
           +HPD  P +  + AEV+ ++A
Sbjct: 153 LHPDVFPGVCKMEAEVVRMTA 173


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +3

Query: 78   LVMAKPKNEDASE--EAKKIVDDAKNFIERAIADIGKTSATK 197
            +V+ + + E   E    KK+V+D K  I+  I D+ +    K
Sbjct: 986  MVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDLDEEKKKK 1027


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -1

Query: 338 PININVAFVACNV*KXDSTSKSNSCYFSNLHRYKTS 231
           P  I+VAF + ++ + D  + S +C+   L RY  S
Sbjct: 169 PSRIDVAFASPSICRPDLAANSATCW-RILSRYSYS 203


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 96  KNEDASEEAKKIVDDAKNFIERAIADIGKTSA 191
           K    + ++ ++   A NF ERA++ IG   A
Sbjct: 309 KTTQFNRQSFRVALRANNFQERAVSHIGMIEA 340


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 233  WFYIYEDWKSSSCW 274
            W  +  DW+SSS W
Sbjct: 2761 WNPLKWDWRSSSTW 2774


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,202
Number of Sequences: 2352
Number of extensions: 3920
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)