Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_M01
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.33 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   3.1  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   7.2  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    20   9.5  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.5  

>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 0.33
 Identities = 6/26 (23%), Positives = 14/26 (53%)
 Frame = +2

Query: 215 CIRMDNWFYIYEDWKSSSCWTWRWSH 292
           C + + + Y+Y+++    C   +W H
Sbjct: 560 CDQCEEYEYVYDEYTCMDCGPGKWPH 585


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 5/26 (19%), Positives = 14/26 (53%)
 Frame = +2

Query: 215 CIRMDNWFYIYEDWKSSSCWTWRWSH 292
           C + + + Y+++++    C   +W H
Sbjct: 470 CDQCEEYEYVHDEYTCMDCGPGKWPH 495


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 179 TNICNGSFDKVFSVVYNFF 123
           T++C+ S  ++F  + NFF
Sbjct: 27  TDVCSASNGELFLALLNFF 45



 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/14 (35%), Positives = 6/14 (42%)
 Frame = +2

Query: 245 YEDWKSSSCWTWRW 286
           YE W     + W W
Sbjct: 169 YERWVQQGAFGWSW 182


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 284 TSKSNSCYFSNLHRYKTSY 228
           +S SNSC +SN +    +Y
Sbjct: 305 SSLSNSCNYSNNYYNNNNY 323


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 144 KNFIERAIADIGKTSATKQLILGTAS 221
           +N ++        T  TK++  GTAS
Sbjct: 197 ENLVQACFQQAQTTYVTKEVATGTAS 222


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 99  NEDASEEAKKIVDDAKNFIERAIADI 176
           N D   + K I D   +FIE  I  I
Sbjct: 42  NSDGIGDLKGIKDKLSHFIESGITAI 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,289
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)