Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L23
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein... 75 4e-14
U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical pr... 32 0.41
U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 6.8
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 6.8
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 6.8
U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylser... 27 8.9
U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylser... 27 8.9
>Z81033-2|CAB02725.1| 263|Caenorhabditis elegans Hypothetical
protein C03C11.2 protein.
Length = 263
Score = 74.9 bits (176), Expect = 4e-14
Identities = 41/107 (38%), Positives = 55/107 (51%)
Frame = +1
Query: 313 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 492
M+ EV+ +NFV YL+ +PRR V IFG EL L F W P G R + T
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60
Query: 493 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKG 633
L +A E+GVP DVL LP ++ ++ +PG V R+ E G
Sbjct: 61 TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENG 105
>AJ011777-1|CAA09770.1| 263|Caenorhabditis elegans FOG-3 protein
protein.
Length = 263
Score = 74.9 bits (176), Expect = 4e-14
Identities = 41/107 (38%), Positives = 55/107 (51%)
Frame = +1
Query: 313 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 492
M+ EV+ +NFV YL+ +PRR V IFG EL L F W P G R + T
Sbjct: 1 MYTEVRELVNFVCRYLFGHIPRRPVGIFGAELGNYLVSHFSSTWDVHHPKNGEMKRMINT 60
Query: 493 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEVSYRIGEKG 633
L +A E+GVP DVL LP ++ ++ +PG V R+ E G
Sbjct: 61 TTSL--CFASSAEEAGVPPSDVLRLLPTNMIIFANPGHVFVRLSENG 105
>U97405-3|AAB53008.1| 192|Caenorhabditis elegans Hypothetical
protein T09B4.6 protein.
Length = 192
Score = 31.9 bits (69), Expect = 0.41
Identities = 24/99 (24%), Positives = 45/99 (45%)
Frame = +1
Query: 313 MHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDRPCRGSAFRCLKT 492
M +EVQ A+ F+ ++++ ++PR RV F L L + + C +
Sbjct: 1 MILEVQEAVQFLSTFMFGRIPRSRVKSFCGHLSSLLSEAIDA-----KRCVDRYDLIVFA 55
Query: 493 GGPLDPVLERAARESGVPVRDVLEHLPRDLAVWVDPGEV 609
G D + +AAR + V + ++ E + L + + G V
Sbjct: 56 DGRSDDTIVQAARRAYVHLGELQECMNNGLIMEIMNGRV 94
>U40798-2|AAQ01525.2| 389|Caenorhabditis elegans Hypothetical
protein R13A1.9 protein.
Length = 389
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 292 CSLVLPKMHIEVQVALNFVISYLYNKLPRRRVNIFGEELEKALKDKFRGHWYPDR 456
C+ ++ +MHI + A +F + + K+ +N FGE+ D F G+W D+
Sbjct: 188 CNSIVWRMHIPLIPATSFFLYLGWMKVAEALLNPFGED-----DDDFEGNWVIDK 237
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 376 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 412
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 145 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 181
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 143 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 179
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 238 LVNRRSPSGKHHRFSPYDCSLVLPKMHIEVQVALNFV 348
L N SP+G +FSP D S+ P H+ +V ++ V
Sbjct: 201 LNNGGSPNGVRSQFSPSDLSIHTPVHHVGSRVRVSSV 237
>U70849-6|ABD63227.1| 284|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform b protein.
Length = 284
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 284 GENRWCL--PLGDRRLTKPLCQQNAPHPN 204
G RW L P+ R L KP+ + HP+
Sbjct: 91 GHKRWVLIPPIAPRDLVKPMAHEKGKHPD 119
>U70849-5|AAF99922.2| 400|Caenorhabditis elegans Phosphatidylserine
receptor familyprotein 1, isoform a protein.
Length = 400
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 284 GENRWCL--PLGDRRLTKPLCQQNAPHPN 204
G RW L P+ R L KP+ + HP+
Sbjct: 207 GHKRWVLIPPIAPRDLVKPMAHEKGKHPD 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,769,572
Number of Sequences: 27780
Number of extensions: 355781
Number of successful extensions: 870
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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