Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L22
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...   120   6e-29
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.18 
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    27   0.94 
AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A prot...    27   0.94 
AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A prot...    27   0.94 
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    27   0.94 
AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A prot...    27   0.94 
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    27   0.94 
AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1 prot...    27   0.94 
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.2  
AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A prot...    26   1.2  
AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450 CY...    25   3.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.8  

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score =  120 bits (289), Expect = 6e-29
 Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 12/191 (6%)
 Frame = +1

Query: 259 ELGDSEKFFIQYNNVPTGIKFVGDLLFLTVPRRRFGIPSTLNYIDRRHS-KKLDPLLKPY 435
           E+   E  +I   N+P G     + +F+ V RRR+GIPSTLN +D        + +LKPY
Sbjct: 39  EVLQRENGYIPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNVVDLSPPFPNTNVILKPY 98

Query: 436 PN-----------PEAVSSLTSVYRTAIDSCARLWMVDTGLLEVPGARRQVKPPAILAYN 582
           PN           P+A + + +VYR  +D C RLW VDTG++E+PG    V+ P++ + +
Sbjct: 99  PNFALNELRADLQPDA-NRIVTVYRPRVDRCDRLWFVDTGMMEIPGNFTVVQRPSVWSID 157

Query: 583 WLTHKLDFRYELDPKVLVNERTPGGLTSLTIDVEPTACGEAHAYITDLATNGLIVFSLGA 762
             T++   R+E+ PK  V   T  GLTS+T+DV+P+ C +   YI+DL T  ++V+    
Sbjct: 158 LNTNEPIHRFEI-PKEAV--ETGYGLTSITLDVDPSDCEKVFVYISDLQTYRMVVYDYAN 214

Query: 763 RAFWRIDHPSF 795
           R  WR  H  F
Sbjct: 215 RRAWRFLHNYF 225


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 453 DRLWIWIRLQKWIQFFTVSP 394
           D  W+W++ Q+W+ F    P
Sbjct: 789 DCCWVWLKFQEWVAFIVFDP 808


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AY344827-1|AAR02438.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AY344826-1|AAR02437.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AY344824-1|AAR02435.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>AF030431-1|AAC39127.1|  153|Anopheles gambiae peritrophin 1
           protein.
          Length = 153

 Score = 26.6 bits (56), Expect = 0.94
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSKCPPGLLWNDSQKQCDYP 72


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 393 VYVV*RRWN---PKSPPWDRQ-K*QISDKLDSCRHIIVLYKEFLAVS*LLDE 250
           +Y+  R+ N   P +PPW    +    D LD C  I+ LYK     + LL+E
Sbjct: 245 IYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYKRGKPNAELLEE 296


>AY344828-1|AAR02439.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -3

Query: 553 LVFSHREPLAVRYPPSTVWHTSRSQSGIP 467
           L+ +H  P+  + PP  +W+ S+ Q   P
Sbjct: 44  LICNHGTPVVSQCPPGLLWNDSQKQCDYP 72


>AY193728-1|AAO62001.1|  519|Anopheles gambiae cytochrome P450
           CYPm3r5 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 271 SEKFFIQYNNVPTGIKFVGDLLFL 342
           S++F+ QY  VP    FVG  +FL
Sbjct: 63  SQRFYEQYKAVPGSPGFVGLYIFL 86


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 717 YVGVRLATSSRLHVDRKRRQTTRSS 643
           +VGV +  SSR H  R+R +  ++S
Sbjct: 37  FVGVHIPGSSRRHSQRRRHKHHQAS 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 936,944
Number of Sequences: 2352
Number of extensions: 20303
Number of successful extensions: 73
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)