Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L17
         (442 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1ZSC6 Cluster: Serine/threonine protein kinases, putat...    35   0.67 
UniRef50_A5B4B9 Cluster: Putative uncharacterized protein; n=2; ...    34   1.2  
UniRef50_Q8NBS0 Cluster: CDNA FLJ90830 fis, clone Y79AA1001793, ...    34   1.2  
UniRef50_Q8N4M3 Cluster: GSG1 protein; n=13; Euteleostomi|Rep: G...    33   2.7  
UniRef50_Q2KHT4 Cluster: GSG1 protein; n=5; Catarrhini|Rep: GSG1...    33   2.7  
UniRef50_Q8IIR3 Cluster: Putative uncharacterized protein; n=4; ...    32   4.7  
UniRef50_A5JSV2 Cluster: Moricin-like D; n=1; Galleria mellonell...    32   4.7  
UniRef50_A0DJW1 Cluster: Chromosome undetermined scaffold_53, wh...    32   6.3  
UniRef50_Q5E5E4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  
UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:...    31   8.3  

>UniRef50_A1ZSC6 Cluster: Serine/threonine protein kinases,
           putative; n=1; Microscilla marina ATCC 23134|Rep:
           Serine/threonine protein kinases, putative - Microscilla
           marina ATCC 23134
          Length = 970

 Score = 35.1 bits (77), Expect = 0.67
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 182 NFPTLLQTFDRNFRISLPTANHQ*QGYQYNN 90
           N+PT L+ F R+ RISL T N +     YNN
Sbjct: 208 NYPTALEFFQRSLRISLQTENQRIMALNYNN 238


>UniRef50_A5B4B9 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1127

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -1

Query: 193 PLAIIFPP--FFRLLTGIFGSACPLQIINDRATSTTMKYLRKYIVDFILNNSKMF 35
           P +I+FP    F +   IFGS C ++ +    T    K L+K I DF+L ++ M+
Sbjct: 570 PYSILFPKKSLFPVEPRIFGSTCYVRDVRPSVTKLDPKALKKVIDDFLLISTSMW 624


>UniRef50_Q8NBS0 Cluster: CDNA FLJ90830 fis, clone Y79AA1001793,
           moderately similar to Mus musculus GSG1; n=4;
           Homo/Pan/Gorilla group|Rep: CDNA FLJ90830 fis, clone
           Y79AA1001793, moderately similar to Mus musculus GSG1 -
           Homo sapiens (Human)
          Length = 275

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -3

Query: 293 CCF*GSS*LTLISTVTHVAIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLPTANHQ 114
           CC   +S +T  +T T V ++F  C    ++FK   N  P   Q F R    + PT    
Sbjct: 170 CCM--ASAVTTFNTYTRVVLEFK-CKH-SKSFKENPNCLPHHHQCFPRRLSSAAPTVGPL 225

Query: 113 *QGYQYNNEILKEVHSG--FYFE 51
              +QY+N+ +  V  G  FY E
Sbjct: 226 TSYHQYHNQPIHSVSEGVDFYSE 248


>UniRef50_Q8N4M3 Cluster: GSG1 protein; n=13; Euteleostomi|Rep: GSG1
           protein - Homo sapiens (Human)
          Length = 323

 Score = 33.1 bits (72), Expect = 2.7
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -3

Query: 293 CCF*GSS*LTLISTVTHVAIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLPTANHQ 114
           CC   +S +T  +T T + ++F  C    ++FK   N  P   Q F R    + PT    
Sbjct: 218 CCM--ASAVTTFNTYTRMVLEFK-CKH-SKSFKENPNCLPHHHQCFPRRLSSAAPTVGPL 273

Query: 113 *QGYQYNNEILKEVHSG--FYFE 51
              +QY+N+ +  V  G  FY E
Sbjct: 274 TSYHQYHNQPIHSVSEGVDFYSE 296


>UniRef50_Q2KHT4 Cluster: GSG1 protein; n=5; Catarrhini|Rep: GSG1
           protein - Homo sapiens (Human)
          Length = 298

 Score = 33.1 bits (72), Expect = 2.7
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -3

Query: 293 CCF*GSS*LTLISTVTHVAIDFMGCSRCGENFKAFGNNFPTLLQTFDRNFRISLPTANHQ 114
           CC   +S +T  +T T + ++F  C    ++FK   N  P   Q F R    + PT    
Sbjct: 193 CCM--ASAVTTFNTYTRMVLEFK-CKH-SKSFKENPNCLPHHHQCFPRRLSSAAPTVGPL 248

Query: 113 *QGYQYNNEILKEVHSG--FYFE 51
              +QY+N+ +  V  G  FY E
Sbjct: 249 TSYHQYHNQPIHSVSEGVDFYSE 271


>UniRef50_Q8IIR3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1830

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 257 KSRLITNYLRNNINLQINNVFLFLNKYYKGI 349
           K  +  NYL+ N  + INN +LFLN Y + +
Sbjct: 674 KKHININYLKTNSYIYINNCYLFLNTYNENL 704


>UniRef50_A5JSV2 Cluster: Moricin-like D; n=1; Galleria
           mellonella|Rep: Moricin-like D - Galleria mellonella
           (Wax moth)
          Length = 63

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 69  MYFLKYFIVVLVALSLMICSGQADPKIPVXXXXXXXXXXXXXXXVLTAAGTAHEVYSHVR 248
           M F    ++V   ++LM+    A+PK                   L A GT  +VY HV+
Sbjct: 1   MKFFNLVLMVFAVVALMLNGTNAEPKGIGSALKKGGKIIKGGLGALGAIGTGQQVYEHVQ 60

Query: 249 NR 254
           NR
Sbjct: 61  NR 62


>UniRef50_A0DJW1 Cluster: Chromosome undetermined scaffold_53, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_53,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 505

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -3

Query: 191 FGNNFPTLLQTFDRNFRISLPTANHQ*QGYQYNN 90
           F NNFP L Q  + N R    T+  Q Q  QYNN
Sbjct: 363 FPNNFPNLQQNQNTNPRFQSVTSGQQYQQQQYNN 396


>UniRef50_Q5E5E4 Cluster: Putative uncharacterized protein; n=1;
           Vibrio fischeri ES114|Rep: Putative uncharacterized
           protein - Vibrio fischeri (strain ATCC 700601 / ES114)
          Length = 664

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +3

Query: 18  FNAGTPNILLLFKIKSTMYFLKYFIVVLVALSLMICSGQA 137
           F+  T +I +L KI+  +Y +K+ +  L+ALSL  C G +
Sbjct: 7   FDYKTAHIFILIKIE--LYIMKHILTALLALSLFGCGGDS 44


>UniRef50_Q09F08 Cluster: Ymf77; n=1; Tetrahymena pigmentosa|Rep:
           Ymf77 - Tetrahymena pigmentosa
          Length = 1260

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 11/19 (57%), Positives = 17/19 (89%)
 Frame = +2

Query: 269 ITNYLRNNINLQINNVFLF 325
           +TN++ N+IN+ INN+FLF
Sbjct: 144 LTNFIYNSINININNLFLF 162


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,041,653
Number of Sequences: 1657284
Number of extensions: 6268933
Number of successful extensions: 15901
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15900
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)