Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L10
(793 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 30 1.9
SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 29 3.3
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 29 4.3
SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3) 29 4.3
SB_14707| Best HMM Match : A_deamin (HMM E-Value=0) 29 5.7
SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16) 28 7.5
SB_56406| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044) 28 7.5
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_53243| Best HMM Match : Sec34 (HMM E-Value=9.9e-05) 28 10.0
SB_49209| Best HMM Match : Vicilin_N (HMM E-Value=0.23) 28 10.0
SB_30671| Best HMM Match : rve (HMM E-Value=6.2e-32) 28 10.0
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 626 KFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDI 784
+F+T +KEL S + +E++ + +DD R ++++ +K + D+
Sbjct: 53 EFETTMKELEQSYLREKEEIIKRLGSELDDNVQEKERMIEELEAKLQEKELDV 105
>SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 627 SSTLKLRSLQVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQKAH 773
++T + + Q Q + Q H+ Q QHQQ+ Q+ H Q H
Sbjct: 267 NNTTAITTTQQQQQQQQQQQQHQLHQQHQLHQHQQQHQYQQQHQHQHQH 315
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/72 (19%), Positives = 36/72 (50%)
Frame = +2
Query: 506 QEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDEL 685
Q A++ + G+P+ ++D++ + ++ ++ I FDT ++ + S++ S
Sbjct: 513 QSALLLLHGIPVVYNLDDIIEDNEKKRKETEKKKLKESIESFDTSVESIGSNSTGSPGRD 572
Query: 686 LSQTKKSIDDIT 721
S ++ I I+
Sbjct: 573 KSDKQRKITQIS 584
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 602 QAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDD 781
+A+E + GK E+ +L + DE++ + +K D+ R++ +K + LD+
Sbjct: 182 KAVESLTGKHHEELDQLMKAHRVRYDEVVKEKQKVEKDLNEKLARALAQAEAKTDNALDE 241
>SB_50648| Best HMM Match : Atrophin-1 (HMM E-Value=1.3)
Length = 1281
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 668 KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDD 781
+++D+L K++ DD++ +R+ DD+S K DD
Sbjct: 610 RASDDLSLPNKRASDDLSLPNKRASDDLSLPNKRASDD 647
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 668 KSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDI 784
K++D+ K++ DD++ +R+ DD+S K DD+
Sbjct: 599 KASDDPSLPNKRASDDLSLPNKRASDDLSLPNKRASDDL 637
>SB_14707| Best HMM Match : A_deamin (HMM E-Value=0)
Length = 1243
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 654 QVQPVKVQMNYYHKQRSQLMTSQHQQEDQWMISHLKQ 764
Q Q ++ Q +HKQ Q Q QQ Q I H KQ
Sbjct: 263 QRQQLQQQQIQHHKQHLQQQRQQRQQLQQQQIQHHKQ 299
>SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16)
Length = 425
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -2
Query: 777 SSVLFALDEISSIDLLADVVMSSIDFFVCDNNSSVLLQAELASSLISVSN 628
+S L LDE+ +D+ + ++F DNN + + ELA L+ +S+
Sbjct: 94 NSFLKDLDELLPLDVRVGYLPVLVEFLSTDNNRNWRFRQELAEQLMYLSD 143
>SB_56406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 578 SLNAGKGRQAIEWVIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISS 757
S N GKGR+ I V + DTE E S DE +++ K I +++ M D+
Sbjct: 244 SRNKGKGRRQIRQVERESDTESSETES------DEDINRILKHHSTILDESKQ-MKDLDK 296
Query: 758 KAKSTLD 778
+ K+T++
Sbjct: 297 RVKTTVE 303
>SB_12148| Best HMM Match : DUF827 (HMM E-Value=0.044)
Length = 933
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/47 (23%), Positives = 27/47 (57%)
Frame = +2
Query: 638 EIKELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLD 778
E+K+ + S LS +K++D++ + + + D+S++ +T+D
Sbjct: 328 EVKKQTDDSQNSHASQLSALEKTVDEMKKALNQQLKDVSNRPAATVD 374
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +2
Query: 647 ELASSACKSTDELLSQTKKSIDDITTSARRSMDDISSKAKSTLDDIXK 790
E S ++ DE+ +++D+I + R++D+I LD+I +
Sbjct: 1514 EADRSQSRALDEIDRNQSRALDEIDRNQSRALDEIDRNQSRALDEIDR 1561
>SB_53243| Best HMM Match : Sec34 (HMM E-Value=9.9e-05)
Length = 530
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 660 QPVKVQMNYYHKQRSQLMTSQHQQEDQWMI 749
+PVK ++ Y+KQ ++L+ + +ED +I
Sbjct: 486 KPVKTKVQEYYKQMNELIAETYTEEDSHII 515
>SB_49209| Best HMM Match : Vicilin_N (HMM E-Value=0.23)
Length = 197
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 152 MSKSSCFFLISNANCSIEIRISKTKNY 72
M+KSS F I+ +NC +E+R+ K +
Sbjct: 1 MAKSSRTFTIAISNCYVEVRLRKLNGF 27
>SB_30671| Best HMM Match : rve (HMM E-Value=6.2e-32)
Length = 965
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 272 GVLHTHRLVSSKWFFPRWAQALIGTAKICYASEIS 376
G+ T L+ K++FPR + + IC++ ++S
Sbjct: 605 GITKTKELLRRKYWFPRMNKRIEDIVSICFSCQVS 639
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.9 bits (59), Expect = 10.0
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 617 VIGKFDTEIKELASSACKSTDELLSQTKKSIDDITTSARRSMD--DISSKAKSTL 775
V+GK E+KE A+ A ++ E ++ K +DI + ++ + D++++ +TL
Sbjct: 1672 VMGKTADELKEKATKAAQNATESKTKALKLEEDIRNALNKTREIVDMAARVANTL 1726
>SB_49189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1373
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 657 VQPVKVQMNYYHKQRSQLMTSQHQQEDQW 743
+QPV ++ YY+ R ++ QQ ++W
Sbjct: 585 LQPVTAKLPYYNDMREEVHDKYSQQREEW 613
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,529,014
Number of Sequences: 59808
Number of extensions: 519495
Number of successful extensions: 1460
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2179815638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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