Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L10
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 162 2e-40
Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical pr... 50 3e-06
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 29 3.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 28 6.7
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 6.7
AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical ... 28 8.8
AF039037-2|AAO21432.1| 324|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z81063-4|CAB02955.1| 209|Caenorhabditis elegans Hypothetical
protein F15D3.6 protein.
Length = 209
Score = 162 bits (394), Expect = 2e-40
Identities = 74/198 (37%), Positives = 118/198 (59%)
Frame = +2
Query: 137 MKIWTSEHTFNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWFF 316
M+IW+SEH F+H WETVAQAA+RKYPNP+N ++ G DVV++ + G + T R++ S +
Sbjct: 1 MRIWSSEHIFDHEWETVAQAAFRKYPNPLNRSITGIDVVKQTLEAGKILTERIIQSHFSI 60
Query: 317 PRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRYTPHPSDSSKT 496
P WA L G + Y+ E + ++P +++ +L T NL ++ VDE + YTP D +KT
Sbjct: 61 PSWATKLTGFSGTQYSHEYTVIDPTRKEFSLTTRNLNGSSFLRVDEKLTYTPAHEDPNKT 120
Query: 497 LLKQEAVVTVQGVPLSSYMEDLLTNKISLNAGKGRQAIEWVIGKFDTEIKELASSACKST 676
+LKQ+ +VT+ + Y E + S NA KGRQ +EWVI E + +++
Sbjct: 121 ILKQDVIVTITLPAFADYCEKTFLSIYSQNANKGRQGVEWVIDHLKKEYEAISTKVSSEV 180
Query: 677 DELLSQTKKSIDDITTSA 730
E+ + +S ++S+
Sbjct: 181 HEMSEKVLRSFGTTSSSS 198
>Z66519-4|CAA91373.1| 210|Caenorhabditis elegans Hypothetical
protein B0334.4 protein.
Length = 210
Score = 49.6 bits (113), Expect = 3e-06
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +2
Query: 137 MKIWTSEHT-FNHPWETVAQAAWRKYPNPMNPAVIGTDVVERKVVDGVLHTHRLVSSKWF 313
MK+W S +T F + ++ VA A W +YPN +I DV+ER++ D + T +L+ +
Sbjct: 1 MKLWDSPNTSFPYSFDEVASAFWDRYPNSHAKHIISEDVLERQITDNTIVTKKLIVKQGS 60
Query: 314 -----FPRWAQALIGTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVRY 466
PRW + ++ E S + + +++ T N++ + E Y
Sbjct: 61 SILKRVPRWISRMT-DIQVVPVIEESVYDKVSKKLVTYTRNVSHISLFQLHERCIY 115
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 341 GTAKICYASEISEVNPIQRQMTLKTTNLTFCHYIAVDETVR 463
GT K +E+ E+NP + + T +NLTF + +V +R
Sbjct: 66 GTPKKLTRAEVQEINPAKFEKTEDMSNLTFLNEASVLHNLR 106
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 684 YYHKQRSQLMTSQHQQEDQ 740
YYH Q+ QL HQQ+ Q
Sbjct: 177 YYHNQQKQLQQQHHQQQQQ 195
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 668 KSTDELLSQTKKSIDDITTSARRSMDDISSK 760
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 28.3 bits (60), Expect = 6.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +1
Query: 547 LHGRPFNQQNFSKCWQRKASYRMGY 621
++G+PF+ + F +CW + Y Y
Sbjct: 465 INGKPFDIEEFGRCWTHQTGYPTVY 489
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 668 KSTDELLSQTKKSIDDITTSARRSMDDISSK 760
K TD+ LS TKK + D+ S R++ + S+
Sbjct: 954 KKTDQELSDTKKHVQDLELSLRKAEQEKQSR 984
>AL110487-2|CAB54425.1| 445|Caenorhabditis elegans Hypothetical
protein Y39E4B.2 protein.
Length = 445
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 208 FSPCCLSNCFPWMVECVF*CP 146
F+ C L +C P+M ECV CP
Sbjct: 63 FNECLLVHCLPYMEECV--CP 81
>AF039037-2|AAO21432.1| 324|Caenorhabditis elegans Hypothetical
protein R02C2.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 155 LMSKSSCFFLISNANCSIEIRISKTK--NYIYLSHY*HYTENHTLSLT 18
++ K CF CSI+ R+SK++ N I+L EN+ L L+
Sbjct: 52 IVGKDECFMESIKRECSIQKRLSKSRHLNMIHLFEIRTNPENYQLILS 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,360,708
Number of Sequences: 27780
Number of extensions: 399326
Number of successful extensions: 1142
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1138
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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