Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L09
(666 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 233 9e-62
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 225 2e-59
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 225 2e-59
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 219 2e-57
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 113 2e-25
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 71 6e-13
09_06_0176 + 21351884-21352693,21352821-21352976,21353425-213536... 29 2.5
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 28 5.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 5.8
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 5.8
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 28 5.8
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 233 bits (570), Expect = 9e-62
Identities = 107/201 (53%), Positives = 146/201 (72%), Gaps = 2/201 (0%)
Frame = +2
Query: 68 VVVSLLALSSINCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDK 241
+ ++L +++++ +VFF+EKF +D WES WV SE E G++ T+GK+ DPED K
Sbjct: 17 LALALASVAAVAGEVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-K 74
Query: 242 GLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHG 421
G++TSED RFYA+S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G
Sbjct: 75 GIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGG 134
Query: 422 ETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV 601
+TPY IMFGPDICG TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +
Sbjct: 135 DTPYSIMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTI 194
Query: 602 LIDNEKVESGDLXADWDFLPP 664
LIDN + +SG + WD LPP
Sbjct: 195 LIDNVEKQSGSIYEHWDILPP 215
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 225 bits (551), Expect = 2e-59
Identities = 99/188 (52%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
Frame = +2
Query: 107 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 280
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 281 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 460
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 461 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLX 640
G TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L+DN + ESG +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMY 205
Query: 641 ADWDFLPP 664
DWD LPP
Sbjct: 206 TDWDILPP 213
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 225 bits (550), Expect = 2e-59
Identities = 105/210 (50%), Positives = 144/210 (68%), Gaps = 12/210 (5%)
Frame = +2
Query: 71 VVSLLALSSINCDVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD-- 238
VV+L +++++ +VFF+EKF DD WE WV SE G++ T+GK++ D +D
Sbjct: 14 VVALASVAAVAGEVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGM 72
Query: 239 --------KGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDC 394
G++TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+
Sbjct: 73 CEVTLLLCAGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGG 132
Query: 395 KLEQKDMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLI 574
++QK GETPY IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+YTLI
Sbjct: 133 DVDQKKFGGETPYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLI 192
Query: 575 VKPDNTYEVLIDNEKVESGDLXADWDFLPP 664
++PD Y +LIDN + ++G + DW+ +PP
Sbjct: 193 IRPDAKYSILIDNTEKQTGSIYDDWNIIPP 222
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 219 bits (534), Expect = 2e-57
Identities = 101/205 (49%), Positives = 139/205 (67%), Gaps = 2/205 (0%)
Frame = +2
Query: 56 LLYWVVVSLLALSSINCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDP 229
LL VV L ++ +V FEE+F DD W S WV S+ E G FK TAG + DP
Sbjct: 11 LLRGAVVLASLLLVVSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP 69
Query: 230 EDDKGLKTSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQK 409
DD+G++T+ DA+ +A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK
Sbjct: 70 -DDRGIQTTSDAKHFAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQK 128
Query: 410 DMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDN 589
G+TPY MFGPDICG TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD
Sbjct: 129 KFGGDTPYSFMFGPDICGDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDA 188
Query: 590 TYEVLIDNEKVESGDLXADWDFLPP 664
+Y +L+DN + E G + DWD LPP
Sbjct: 189 SYSLLVDNREREFGSMYTDWDILPP 213
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 113 bits (271), Expect = 2e-25
Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 10/212 (4%)
Frame = +2
Query: 56 LLYWVVVSLLALSSINCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPED 235
LL +++S L + D F E F D+S+E WV S GK+ K K SD +
Sbjct: 7 LLPLLLLSALLVQIRASDPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHE 60
Query: 236 DKGLKTSEDARFYALSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLE 403
D GL SE A+ YA+ ++ +P + + +V+QF V+ + ++CGG YLK D +
Sbjct: 61 DYGLLVSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWD 120
Query: 404 QKDMHGETPYEIMFGPDICGPGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLY 565
K+ ETPY IMFGPD CG T KVH I +K GK H +K D +H+Y
Sbjct: 121 AKEFDNETPYTIMFGPDKCG-STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVY 179
Query: 566 TLIVKPDNTYEVLIDNEKVESGDLXADWDFLP 661
T I+KPDN +L+D E+ + + + DF P
Sbjct: 180 TAILKPDNEVRILVDGEEKKKANFLSADDFEP 211
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +2
Query: 503 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLXADWDFLPP 664
G NHLIKKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D LPP
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPP 568
>09_06_0176 + 21351884-21352693,21352821-21352976,21353425-21353613,
21354741-21356354,21356446-21356553,21356649-21357509,
21357586-21357632,21358591-21358697,21359512-21359630,
21359706-21359915,21360412-21360693,21360820-21360952,
21361256-21361413,21362564-21362647,21362949-21363035
Length = 1654
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -1
Query: 243 PLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNAS--KLTT 70
P + N A+ + N P S++ +LLS S + D+ + K +
Sbjct: 810 PYCVGKKIPNTDALLQHMRNKHPEGSVWPKLLSVLDPNLISDTSRGDHFSDDMTVYKDSE 869
Query: 69 TQYNSFHFRFTVPPSSTKDRP 7
QY FHF+ +PP+ T RP
Sbjct: 870 EQY-VFHFKRILPPAVTDQRP 889
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 613 IVNEDFIGVVRFHNQSVQMCVDI 545
+V EDF+ + F +Q+V +C+D+
Sbjct: 353 LVEEDFVQIAEFLHQAVTICLDV 375
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -1
Query: 456 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 313
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 363 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 184
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 183 SFPGCSL 163
G L
Sbjct: 797 GLCGIPL 803
>01_04_0010 -
15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -3
Query: 427 GLSVHVLLLQFAVKDLKVSASTVNVLFMFDSELDDQGFTLITERFELTGESIEPRIFR 254
G V LL L ++ +T +V+ ++DS+ + Q +R G+ E ++FR
Sbjct: 598 GSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,596,447
Number of Sequences: 37544
Number of extensions: 449568
Number of successful extensions: 1187
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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