Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L08
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398...    31   0.86 
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026     30   2.0  
12_01_0445 - 3513733-3513819,3514392-3514613,3514730-3514999,351...    30   2.6  
01_07_0224 - 42121011-42122486                                         29   4.6  
03_05_0840 + 28101420-28101779,28101878-28101991,28102131-281022...    29   6.1  

>12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,
            3983250-3983301,3983497-3983654,3983756-3985617,
            3986029-3986093,3986176-3986340,3986836-3986893,
            3987479-3987590,3987661-3987712,3988080-3988140,
            3988220-3988377,3988705-3988787,3988897-3988945,
            3989122-3989185,3990225-3990317,3990410-3990543,
            3991364-3991585,3991815-3991937,3992103-3992267,
            3993064-3993450
          Length = 1479

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -3

Query: 330  SSASQACFSEELLFVHHRGSSCHHLTTLHPC 238
            SS+S +  S E L VH  G SC  LT L+ C
Sbjct: 1095 SSSSSSASSTERLKVHQSGKSCKELTGLYMC 1125


>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
          Length = 961

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -3

Query: 330 SSASQACFSEELLFVHHRGSSCHHLTTLHPC 238
           SS+S +  S E L  H  G SC  LT L+ C
Sbjct: 135 SSSSSSASSSERLKAHQSGKSCKELTGLYMC 165


>12_01_0445 -
           3513733-3513819,3514392-3514613,3514730-3514999,
           3515033-3517110,3517649-3517976,3519136-3519255,
           3519299-3519352,3520115-3520154,3520344-3520411
          Length = 1088

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
 Frame = +3

Query: 636 DKDLRESLKITLDHKSEIFQNLNGALSDVQLRANTTEE----WPYIENVVTKLRPLI--- 794
           D+D++E+LK   D  +  F  +N     V+  A  TEE    W   E+ V  L+ L+   
Sbjct: 163 DEDVKENLKSLNDKLAAAFLTINAKEELVRQHAKVTEEAVLGWEQAESEVAALKKLLEAS 222

Query: 795 VHGNGPXKNTLNHM 836
              NG  +  ++H+
Sbjct: 223 AQKNGSLEVQVSHL 236


>01_07_0224 - 42121011-42122486
          Length = 491

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/60 (23%), Positives = 27/60 (45%)
 Frame = +3

Query: 342 KEKIILFTDSYDVMFLGNLDEIVKKFKSFPDTRVLFSAEQFCWPDAKLATQYPNIEVVSP 521
           + +++L   SY+  + G   EI+     +    +L      C+P A + T++  I  V P
Sbjct: 215 RRRVVLGVLSYNPWWAGTYGEIISGLSDYHVVDLLHDKRTHCFPGAIVGTRFHGILSVDP 274


>03_05_0840 +
           28101420-28101779,28101878-28101991,28102131-28102229,
           28102800-28102874,28103311-28103378,28104015-28104087
          Length = 262

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 690 FQNLNGALSDVQLRANTTEEWPYIENVVTKLRPL 791
           F  +  A++   LRA   E WPY   V   L PL
Sbjct: 166 FGTIYQAINTDTLRAQNMETWPYFNQVTANLVPL 199


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,388,137
Number of Sequences: 37544
Number of extensions: 469301
Number of successful extensions: 1298
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)