Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L07
         (410 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    31   0.43 
AF040652-6|AAY55875.1|  149|Caenorhabditis elegans Hypothetical ...    29   0.99 
Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical pr...    28   2.3  
U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical pr...    27   5.3  
U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like pr...    26   9.2  
AL034488-6|CAA22450.2|  467|Caenorhabditis elegans Hypothetical ...    26   9.2  
AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical ...    26   9.2  

>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 30.7 bits (66), Expect = 0.43
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 84  WPLQALRQPQKPAPQLLPYTGLDYVYTPGLVPPVISPYASPA-AVPITYSALPS 242
           +P Q   +P +  PQL  + G  YVY P    P +S Y SP+ A P      P+
Sbjct: 243 YPAQQEIKPSQTVPQLSAHHG--YVYGPQQAMPQLSQYPSPSTAAPAPVPEQPT 294


>AF040652-6|AAY55875.1|  149|Caenorhabditis elegans Hypothetical
           protein T05A8.8 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 0.99
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 63  SLCWPCLWPLQALRQPQKPAPQLLPYTGLDYV 158
           S CW  + P  AL  PQ P PQ+     +DYV
Sbjct: 42  SSCWLVV-PSSALIHPQVPVPQIQVMNSMDYV 72


>Z81143-1|CAB03513.1|  381|Caenorhabditis elegans Hypothetical
           protein ZK265.2 protein.
          Length = 381

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 171 LVPPVISPYASPAAVPITYSALPSATYYVR*NKIISRHL 287
           + PP +  Y SPA V   + A P+A  Y R  K+   H+
Sbjct: 343 VAPPKLHDYESPAPVADAHDAAPAAQPYKR-RKVARAHM 380


>U58748-9|AAB52969.3|  542|Caenorhabditis elegans Hypothetical
           protein ZK180.5a protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 117 PAPQLLPYTGLDYVYTPGLVPPVISPYASPAA 212
           P PQ++P     +V T   V P ++ Y  PAA
Sbjct: 401 PQPQVIPQAPETFVETSAPVAPQVTEYPIPAA 432


>U58748-8|AAM97986.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK180.5b protein.
          Length = 497

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 117 PAPQLLPYTGLDYVYTPGLVPPVISPYASPAA 212
           P PQ++P     +V T   V P ++ Y  PAA
Sbjct: 401 PQPQVIPQAPETFVETSAPVAPQVTEYPIPAA 432


>U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like
           protein family protein11 protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +3

Query: 108 PQKPAPQLLPYTGLDYVYTPGLVPPVISPYASPAAVPIT 224
           P    P ++P T    + TP ++P ++     P  +P+T
Sbjct: 161 PTVKIPNIIP-TNFPTIETPDIIPKILPTIKIPEIIPLT 198


>AL034488-6|CAA22450.2|  467|Caenorhabditis elegans Hypothetical
           protein Y54G11A.7 protein.
          Length = 467

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -3

Query: 84  RDTANRAKKTKNLLDMLFVSS 22
           R+ ANR  KT +LLDM+  SS
Sbjct: 277 REIANRFNKTNSLLDMVDASS 297


>AC006610-3|AAK85449.1|  264|Caenorhabditis elegans Hypothetical
           protein C30F12.3 protein.
          Length = 264

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 103 LRAWSGQRHGQQSEENE 53
           +R WSG RH +QS ++E
Sbjct: 4   IRKWSGSRHNRQSLQSE 20


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,670,444
Number of Sequences: 27780
Number of extensions: 142394
Number of successful extensions: 487
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)