Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L05
(865 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53272| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_12335| Best HMM Match : Pou (HMM E-Value=0) 73 2e-13
SB_28281| Best HMM Match : Pou (HMM E-Value=0) 50 3e-06
SB_31379| Best HMM Match : Pou (HMM E-Value=0) 48 1e-05
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 34 0.17
SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22) 33 0.30
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 33 0.40
SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 31 0.92
SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.1
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 4.9
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 29 4.9
SB_9982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 28 8.5
SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_51828| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_24975| Best HMM Match : ET (HMM E-Value=1) 28 8.5
>SB_53272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 93.5 bits (222), Expect = 2e-19
Identities = 63/138 (45%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Frame = +1
Query: 448 PPPAPH-DHRHLQ-HAAXGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHP 621
PP A DH + +AA +PV + +TL + P +Q +R+ P
Sbjct: 129 PPNAGSPDHTRIHLNAALQPGSPVSVAYQNVNGSMTLPASFA-PNNQ--TIRENPGVQDP 185
Query: 622 -LHHHAMERDQPEEDTPTSDDLEAFAKQFKQRRIKLGFTXADVGLALGTLYGNVFXTXXX 798
L H ++ D +DTPTSDDLE FAKQFKQRRIKLGFT ADVGLALGTLYGNVF +
Sbjct: 186 QLQHDILDAD---DDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVF-SQTT 241
Query: 799 XXXXXXXXXXLKNMCKFK 852
KNMCK K
Sbjct: 242 ICRFEALQLSFKNMCKLK 259
>SB_12335| Best HMM Match : Pou (HMM E-Value=0)
Length = 401
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/69 (52%), Positives = 43/69 (62%)
Frame = +1
Query: 646 DQPEEDTPTSDDLEAFAKQFKQRRIKLGFTXADVGLALGTLYGNVFXTXXXXXXXXXXXX 825
++ D T D+L FAKQF+QRR+ LGFT ADVG+ALGTLYGNV +
Sbjct: 213 EEAATDPTTPDELSTFAKQFRQRRVALGFTQADVGVALGTLYGNVL-SQTTICRFEALQL 271
Query: 826 XLKNMCKFK 852
LKNMCK K
Sbjct: 272 SLKNMCKLK 280
>SB_28281| Best HMM Match : Pou (HMM E-Value=0)
Length = 250
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +1
Query: 679 DLEAFAKQFKQRRIKLGFTXADVGLALGTLYGNVFXTXXXXXXXXXXXXXLKNMCKFKXP 858
+LE FA QFK RRIKLGFT +VG AL ++G F + KN CK K
Sbjct: 95 ELEEFATQFKLRRIKLGFTQTNVGAALAAVHGTDF-SQTTICRFENLQLSFKNACKLKPI 153
Query: 859 LA 864
LA
Sbjct: 154 LA 155
>SB_31379| Best HMM Match : Pou (HMM E-Value=0)
Length = 310
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +1
Query: 610 SPHPLHHHAMERDQPEEDTPTSDDLEAFAKQFKQRRIKLGFTXADVGLALGTL 768
S H LH QP +D +LE FA++FKQRRIKLG T ADVG AL L
Sbjct: 137 SGHSLHALHSAIGQPADDM-NPRELEWFAERFKQRRIKLGVTQADVGSALAHL 188
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 33.9 bits (74), Expect = 0.17
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Frame = +1
Query: 337 SPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHD-HRHLQHAAXGWHAPV 513
+P P P TS+PP P PP PH ++H ++ + P
Sbjct: 258 TPHTSIPPTPTPHTSIPPTP--TPHTSIPPTPTPHTSIPPTPHPTYKHPSYSYPTYKHPS 315
Query: 514 VS-PHYGAGSPVTLH-GGYPMPVHQHHMLRDIQPSPHPLHHHAMERDQPEEDTPTSDDLE 687
S P Y S + H +P+ H I P+PHP + H+ P+S ++
Sbjct: 316 YSYPSYKHPSYPSSHIQASLLPLIPH---TSIPPTPHPTYKHSSYPSYKHPSYPSS-HIQ 371
Query: 688 AF 693
AF
Sbjct: 372 AF 373
Score = 28.7 bits (61), Expect = 6.5
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Frame = +1
Query: 268 HAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVK 447
H + P + P Y+HP +S P+ P P + P+ P + P
Sbjct: 290 HTSIPPTPHPT---YKHPSYS--YPTYKHPSYSYP-SYKHPSYPSSHIQASLLPLIPHTS 343
Query: 448 PPPAPHD-HRHLQHAAXGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPL 624
PP PH ++H + + H S H A + +P+ H I P+PHP
Sbjct: 344 IPPTPHPTYKHSSYPSYK-HPSYPSSHIQAFILPLIQASL-LPLVPH---TSIPPTPHPT 398
Query: 625 HHH 633
+ H
Sbjct: 399 YKH 401
>SB_28690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2179
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/76 (28%), Positives = 30/76 (39%)
Frame = +1
Query: 457 APHDHRHLQHAAXGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHPLHHHA 636
+PH +H H A SP + SP G P+ + ML+ P P P HHH
Sbjct: 749 SPHPSQHHHHLHALVAASSSSPSSSSSSPPCFSRGIPLLIIITSMLKSRHPPP-PHHHHH 807
Query: 637 MERDQPEEDTPTSDDL 684
+P+S L
Sbjct: 808 HHLHALVAASPSSSSL 823
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 33.5 bits (73), Expect = 0.23
Identities = 26/84 (30%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Frame = +1
Query: 223 TYMPAEMELGNIGGYHAASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPW----TSLPP 390
TY+P GGY A +P +P HP SGG P P P G+P T P
Sbjct: 568 TYVPDHR---TTGGYPAPTPSYPQPGTYPPPHP--SGGYPQPSPPHGGHPHHPPPTGYPG 622
Query: 391 ADPWAMXXXXXXXXXPDVKPPPAP 462
P PPP P
Sbjct: 623 GYPGTHTAPPAGGYPTGQHPPPPP 646
>SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22)
Length = 441
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 661 DTPTSDDLEAFAKQFKQRRIKLGFTXADVGLALGTLYG 774
D + ++++F + F+ RRI LG+T DVG L G
Sbjct: 149 DQVLNQEMKSFIESFRTRRIALGYTQEDVGFELSRTNG 186
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/96 (28%), Positives = 32/96 (33%)
Frame = +1
Query: 334 GSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHDHRHLQHAAXGWHAPV 513
G+P P P G P +PP P V PP APH A P
Sbjct: 445 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGAPHQRVPPP 504
Query: 514 VSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSPHP 621
+PH P H P P H + +PHP
Sbjct: 505 GAPHPRVPPPGAPHPRVPPPGAPHPRVPP-PGAPHP 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/80 (28%), Positives = 26/80 (32%)
Frame = +1
Query: 334 GSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAPHDHRHLQHAAXGWHAPV 513
G+P P P G P +PP P V PP APH A P
Sbjct: 525 GAPHPRVPPPGAPHPRVPPPGAPHPRVPPPGASHPRVPPPGAPHPRVPPPGAPHPRVPPP 584
Query: 514 VSPHYGAGSPVTLHGGYPMP 573
+PH P H P P
Sbjct: 585 GTPHPRVPPPGAPHPKVPPP 604
Score = 30.7 bits (66), Expect = 1.6
Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 10/124 (8%)
Frame = +1
Query: 280 PRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWT-SLPPADPWAM---------XXXXXXX 429
PR+ + A +P GS P P+T +LPP +P+A
Sbjct: 341 PRAPQGASQTPPYP----GSHYSRVPPPDGPYTRALPPGEPYARMPPPGATHPRVPSPGA 396
Query: 430 XXPDVKPPPAPHDHRHLQHAAXGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQP 609
P V PP APH A+ P +PH P H +P P H +
Sbjct: 397 SHPRVPPPGAPHPRVPPPGASHQRVRPPGAPHPRVPPPGAPHPRFPPPGAPHPRVPP-PG 455
Query: 610 SPHP 621
+PHP
Sbjct: 456 APHP 459
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 32.7 bits (71), Expect = 0.40
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +1
Query: 304 MKYQHPLHSGGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPP--APHDHRH 477
++YQ + S G+ P P G+P++S+ A P + P PPP AP
Sbjct: 558 LRYQM-VPSYGAQYPAPPPDGSPYSSMVYAPPAGVQPPQSGSGAPPAMPPPVGAPGGQPS 616
Query: 478 LQHAAXGWHAPV-VSPHYGAGS 540
H +AP P YG S
Sbjct: 617 YSHPMPQGYAPQGYQPEYGGQS 638
>SB_32583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 526
Score = 32.3 bits (70), Expect = 0.52
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 9/70 (12%)
Frame = +1
Query: 451 PPAPHDHRHLQHAAXGWHAPVVSPHYGAGSPVTLHGGYPMPVHQHHMLRDIQPSP----- 615
PP PH L+H H P P + SP +G P P+H+HH+ SP
Sbjct: 2 PPVPHPL--LRH-----HPP---PPASSSSPTPCYGITPHPLHRHHLPPPATASPPTPCI 51
Query: 616 ----HPLHHH 633
HPLH H
Sbjct: 52 VIISHPLHRH 61
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 31.5 bits (68), Expect = 0.92
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 343 SPGAPVIGNPWTSLPPADP 399
SPG+P PWTS+PP P
Sbjct: 181 SPGSPTEDTPWTSVPPPPP 199
>SB_15409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 31.5 bits (68), Expect = 0.92
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = -3
Query: 626 CSGCGEGWMSLSIWCWCTGIGYPPCSVTGEPAP*CGLTTGACQPXAACC 480
C CG+GW + C +G G C G+ CG G C C
Sbjct: 247 CGTCGKGWGTCGKGCRTSGKG---CGTCGKGCGTCGKGCGTCGKGCGTC 292
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 13/96 (13%)
Frame = +2
Query: 383 CHPPTPGRCTSITHTHINQT*SLPRLLTTTATC--SMRPXAGTR--PSSAR---ITVRAR 541
C P P +C S ++ R L + C S P R P+S R I V +
Sbjct: 2078 CEPDCPVKCCSALAKQVSILVHNSRKLICPSHCEKSCEPDCPIRCCPNSPRHVSIIVNSE 2137
Query: 542 P------SHCMEDTQCPCTNTICSETSSPRRIRCII 631
P S+C +D + PC C E +P+ + +I
Sbjct: 2138 PKPESCPSYCSKDCRPPCPLKCCEEPGAPKPVTILI 2173
>SB_21461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 271 AASPRSAEPADMKYQHPLHSGGSPSPGAPVIGNPWTSLP-PADP 399
A P +A P D P+ G P P P+ GNP + P P DP
Sbjct: 32 APPPNTAIPGDRPPNTPIP--GDPPPNIPIPGNPPPNTPIPGDP 73
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 337 SPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAP 462
+PS G P P T PPA P ++ P PPPAP
Sbjct: 525 APSSGVPT---PVTEPPPAPPPSVFAPSSGVPTPVTAPPPAP 563
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 368 FPITGAPGDGDPPECNG 318
FP TG+PG PP+ NG
Sbjct: 82 FPATGSPGSASPPKTNG 98
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 313 QHPLHS-GGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPDVKPPPAP 462
QH HS G P P P++ +P PP P P +PP P
Sbjct: 714 QHDKHSCGPHPVPPTPLVQHPEPEAPPQLPPPPPFIVDDTESPQEQPPTTP 764
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 421 RDAGASPRGRRVAVTSKGSLSRAPPGTATRPSATDAGTSCRQAQHYAAT 275
RD + P G T G R GTA S + G SC + +++T
Sbjct: 2622 RDGKSIPSGLLWRSTDAGQYYRVNSGTAVHHSVSSNGCSCNRTSSHSST 2670
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +3
Query: 171 RQDAVHRGSEIRRHGGDHVHARRDGARQHRR 263
RQDA HR + H D VH R+D A HR+
Sbjct: 666 RQDADHRRQDADHHRQDVVHPRQD-ADHHRQ 695
>SB_9982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 565 PMPVHQHHMLR-DIQPSPHPLH-HHAMERDQPEEDTPTSDDLE 687
P P+ HH++R P P+ HH + +D PE T D++
Sbjct: 180 PDPIVIHHLIRYSFLSPPDPIVIHHLISKDTPENKRVTCYDID 222
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +1
Query: 265 YHAASPRSAEPADMKYQHPLHS-GGSPSPGAPVIGNPWTSLPPADPWAMXXXXXXXXXPD 441
+H +P +P + P HS G P P P++ +P PP P P
Sbjct: 40 HHHDTPHYHQPPPPPTR-PSHSCGPHPVPPTPLVQHPEPEAPPQLPPPPPFIVDDTESPQ 98
Query: 442 VKPPPAP 462
+PP P
Sbjct: 99 EQPPTTP 105
>SB_6452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 514 VSPHYGAGSPVTLHGGYPMP-VHQHHMLRDI---QPSPH 618
V PH G G+PV G+P+P V +H + I +P PH
Sbjct: 252 VEPHPGCGTPVV---GFPVPDVPEHRLSPPIVVSEPDPH 287
>SB_51828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 547 TLHGGYPMPVHQHHMLRDIQPSPHPLHHHA 636
+ HG P+PV L + Q PH H HA
Sbjct: 89 SFHGNLPLPVLAPRELTNPQSKPHAPHMHA 118
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 28.3 bits (60), Expect = 8.5
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 389 PPTPGRCTSITHTHINQT*SLPRLLTT--TATCSMRPXAGTRPS-SARITVRARPSHCME 559
P TP ++ ++ T + P L+ TA+ S+ P PS S +V P+
Sbjct: 107 PNTPLSPSASVTASVSVTPNTPLSLSASVTASVSVTPNTPQSPSASVTASVSVTPNIHTP 166
Query: 560 DTQCPCTNTICSETSSPRRIRCI 628
TQC C + S+T +CI
Sbjct: 167 VTQCICDSQCISDTQHTPVTQCI 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,086,983
Number of Sequences: 59808
Number of extensions: 574280
Number of successful extensions: 2389
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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