Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L03
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     24   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.5  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = +1

Query: 148 HPQLLSHRKIKKAKKCHPDKLLTSNQQAMLPSIGPPPPVQHSSLI 282
           +  ++ H +  + ++C PD+ L  +Q+A   S     P  HS ++
Sbjct: 170 YEDIVKHLERLREERCDPDRPLPLDQKARDLSPRNGSPTDHSPVL 214


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 427 LFSTFCVV*FSTVIIYIIVKLYMLLCV 507
           LF   C+  F    I   V L  LLC+
Sbjct: 140 LFFLLCIYYFYCAFIIFTVHLLFLLCI 166


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +1

Query: 382 YNNNDKEILIHNVDILFSTFCVV*FSTVIIYIIVKLYM 495
           Y      I+ HN+ ++  + CV+ ++  I  ++ + Y+
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYL 199


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/38 (21%), Positives = 20/38 (52%)
 Frame = +1

Query: 382 YNNNDKEILIHNVDILFSTFCVV*FSTVIIYIIVKLYM 495
           Y      I+ HN+ ++  + CV+ ++  I  ++ + Y+
Sbjct: 162 YQVTGTPIIFHNLTLITYSLCVISWAVGIGIMLAQYYL 199


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 204  QTTDVKPTSNVAVNRSTTT 260
            +TT  +PT+     R TTT
Sbjct: 1059 RTTTTRPTTTSTTTRPTTT 1077


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,288
Number of Sequences: 336
Number of extensions: 2961
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)