Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_L03
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens ...    31   4.1  
BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706...    30   5.4  
BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706...    30   5.4  
AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.             30   5.4  
AB067507-1|BAB67813.1|  445|Homo sapiens KIAA1920 protein protein.     29   9.5  

>AK027100-1|BAB15657.1|  363|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23447 fis, clone HSI03346. ).
          Length = 363

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +3

Query: 105 FHCARELLPVVRMTSPAITKSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDP 284
           F C+R   P    TSP  T SS N     MS   +   +P+++   +     C T+ S P
Sbjct: 5   FECSRTTSPEPLSTSPCRTTSSRN--SPTMSCPASVACEPSTSTTTSSPPKACLTRPSSP 62


>BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 162 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 308
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 162 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 308
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.
          Length = 76

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = +3

Query: 162 KSSENQKGEKMSPGQTTDVKPTSNVAVNRSTTTCTTQQSDPITWIRIFK 308
           K+++ Q G+K   G   D K  +  A+  + T C TQ  DP T+ + F+
Sbjct: 13  KNAKKQAGQKKKQGH--DQKAAAKAALIYTCTVCRTQMPDPKTFKQHFE 59


>AB067507-1|BAB67813.1|  445|Homo sapiens KIAA1920 protein protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 202 DKLLTSNQQAMLPSIGPPPPVQHSSLIQSP 291
           + L T++ +A L   GP PP  H  ++Q+P
Sbjct: 309 EALTTAHLEATLEEAGPSPPTFHCEVVQAP 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,404,250
Number of Sequences: 237096
Number of extensions: 1685443
Number of successful extensions: 4591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4578
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)