Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_L02
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 31 1.4
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 31 1.4
Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical pr... 30 1.9
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 30 1.9
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 28 7.7
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 7.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.7
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 7.7
AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical ... 28 7.7
AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical ... 28 7.7
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 170 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 349
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 350 QPASTQKPRSNSIS 391
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 170 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 349
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 350 QPASTQKPRSNSIS 391
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +2
Query: 170 PDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNA 349
P+ + PG T GT V ++ M QS S PP+ + + P+ VP
Sbjct: 361 PETRGAEPGCTAGEWL-NGTNAVPQKVSMAP-SQSSSSPPPPEPVPTPKVAQTPAPVPVP 418
Query: 350 QPASTQKPRSNSIS 391
PA+ +P SN+ S
Sbjct: 419 TPAAAPRPMSNNNS 432
>Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical
protein F53B2.4 protein.
Length = 325
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +1
Query: 493 SLRMFRLLCLLDVCGLFVKLARAKHNKKTCLTGHHFLFRSLVAL*K----LNSLTVILLL 660
+L ++ LLC++ L +KL + K+N+K+ + L SL L L +L L+
Sbjct: 210 NLAIWLLLCIISNLTLLIKLKKLKNNRKSAILQRAELSLSLTTLSMLLSFLTNLACALIF 269
Query: 661 FLWIIIECFIVCVSKYG 711
++ + + + + +G
Sbjct: 270 LIFPSLTAYFIALRPFG 286
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Frame = +3
Query: 39 CVEFCKINTTKVFNNSQRHLSRGRPPTAN------RFLQGGS*SRIPLKCLMSIPAHRAE 200
CVE C +V + +S G+P AN F Q G+ P + E
Sbjct: 283 CVEGCPSGIVEVAGRCVKQVSIGQPCVANAQCNFGSFCQSGTCQCPPGFYVQDEQCQAIE 342
Query: 201 PSTPPLLEVQE*CTKGRSCYPFGNLRFPKRHRNVH 305
+ E CTKG CY G P+ H ++
Sbjct: 343 SEPNESCQNNEKCTKGSVCYN-GKCSCPRNHELIN 376
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 6/95 (6%)
Frame = +3
Query: 39 CVEFCKINTTKVFNNSQRHLSRGRPPTAN------RFLQGGS*SRIPLKCLMSIPAHRAE 200
CVE C +V + +S G+P AN F Q G+ P + E
Sbjct: 283 CVEGCPSGIVEVAGRCVKQVSIGQPCVANAQCNFGSFCQSGTCQCPPGFYVQDEQCQAIE 342
Query: 201 PSTPPLLEVQE*CTKGRSCYPFGNLRFPKRHRNVH 305
+ E CTKG CY G P+ H ++
Sbjct: 343 SEPNESCQNNEKCTKGSVCYN-GKCSCPRNHELIN 376
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +2
Query: 158 PAQMPDVYSSTPGGTIYSTTPGGTRI-VYERSFMLSLRQSPISQTPPQCALPAALLKN-- 328
P+Q P P T + P +I V ++ S + SP Q PQ + P A
Sbjct: 197 PSQSPQGSPQLPTQTTTTNAPIKIKIQVQQQQPQQSPQNSPQQQAQPQASQPIAQTTQTI 256
Query: 329 PSSVPNAQP 355
P+S+P A P
Sbjct: 257 PASIPQAAP 265
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 260 SLRQSPISQTPPQCALPAALLK---NPSSVPNAQPASTQKPRSNSISFDESQETFSMD 424
SL S TP Q + L+ +PS +P+ PA KPR + +S S F D
Sbjct: 255 SLASSDAPATPDQNKSDNSSLRQTPSPSVLPSPVPAPMAKPRESVVSMANSTNPFDDD 312
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 283
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 657 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 712
Query: 284 QTPPQCALPAALLKNPSSVPNAQPAST 364
TP + P+S P QPA+T
Sbjct: 713 TTPSTITPTTRPVTQPASQPATQPATT 739
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 283
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 713 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 768
Query: 284 QTPPQCALPAALLKNPSSVPNAQPAST 364
TP + P+S P QPA+T
Sbjct: 769 TTPSTITPTTRPVTQPASQPATQPATT 795
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 THSQSIPSRRVLITDPAQ---MPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPIS 283
T S + P+ V T P +P V ++TP T +TT T ++ +P+
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTTTTTQT----TPTTPVV 591
Query: 284 QTPPQCALPAALLKNPSSVPNAQPAST 364
TP + P+S P QPA+T
Sbjct: 592 TTPSTITPTTRPVTQPASQPATQPATT 618
>AC006696-2|ABQ13058.1| 129|Caenorhabditis elegans Hypothetical
protein W08E12.8b protein.
Length = 129
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 137 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 316
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 11 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 66
Query: 317 LLKNP 331
L NP
Sbjct: 67 LAFNP 71
>AC006696-1|AAF39991.1| 151|Caenorhabditis elegans Hypothetical
protein W08E12.8a protein.
Length = 151
Score = 28.3 bits (60), Expect = 7.7
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +2
Query: 137 RRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAA 316
RRVL + + P + S + +STTP + + +LS S SQ PP LP
Sbjct: 33 RRVLDEEENECPPIESRGSSTSSFSTTPSSSASPLSINQLLS---SSFSQ-PPAPQLPVP 88
Query: 317 LLKNP 331
L NP
Sbjct: 89 LAFNP 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,675,944
Number of Sequences: 27780
Number of extensions: 421655
Number of successful extensions: 1185
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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