Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K21
         (536 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0342 - 42860548-42862343,42863345-42863396,42863666-428638...    29   1.8  
02_05_0225 + 26951993-26952165,26953169-26953567,26953644-269537...    28   5.4  

>01_07_0342 -
           42860548-42862343,42863345-42863396,42863666-42863848,
           42864288-42864461,42864528-42864962
          Length = 879

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = -3

Query: 147 NDERALASCKTSFRKCSIWQFHICVXCSLKCGSGI-FSWDTVHMSCAGGG 1
           +D   L++  T + KC IW+  + V  S+ C   + F+     +SC G G
Sbjct: 560 HDPFVLSALVTMYSKCGIWEDFVKVQMSVSCQDQVSFNSVISGLSCLGRG 609


>02_05_0225 + 26951993-26952165,26953169-26953567,26953644-26953797,
            26954069-26954240,26954494-26954567,26954667-26954763,
            26954888-26955000,26955168-26955283,26955960-26956017,
            26956512-26956664,26957377-26957460,26957579-26957734,
            26958401-26958469,26959212-26959300,26959398-26959560,
            26959740-26959874,26959950-26960055,26960143-26960237,
            26960508-26960753,26961567-26961635,26961772-26961837,
            26961838-26961983,26962348-26962449,26962752-26962899,
            26964183-26964239,26964315-26964445,26964535-26964623,
            26964694-26965007,26965084-26965176,26966504-26966578,
            26966834-26966895,26967254-26967356,26967518-26967676,
            26967790-26967930,26967981-26968084,26968146-26968260,
            26969017-26969169,26969256-26969417
          Length = 1646

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +3

Query: 156  KISLIYYEDVYLYFSFSFCTSLYCCIVI 239
            KISLI  ED  +  +F +C +L  C+++
Sbjct: 1287 KISLIEIEDEMVSLNFEYCINLNACLMM 1314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,529,192
Number of Sequences: 37544
Number of extensions: 172347
Number of successful extensions: 240
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)