Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K21
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    31   0.69 
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    31   0.69 
Z81575-2|CAB04639.1|  339|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 102  CSIWQFHICVXCSLKCGSGI 43
            C+ WQF +   CS KCG G+
Sbjct: 1129 CTWWQFGVWSDCSAKCGDGV 1148


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 30.7 bits (66), Expect = 0.69
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 102  CSIWQFHICVXCSLKCGSGI 43
            C+ WQF +   CS KCG G+
Sbjct: 1129 CTWWQFGVWSDCSAKCGDGV 1148


>Z81575-2|CAB04639.1|  339|Caenorhabditis elegans Hypothetical
           protein R08H2.2 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +1

Query: 100 AFTKRSFARRKRPLVISFKKYH*YITKMFTFIFLFPFVPRYIVVL 234
           +FT    A       ISF  YH Y+++    IFL  F   Y  ++
Sbjct: 61  SFTSGMMAHSTETSCISFNLYHGYVSRDLAPIFLVDFCGIYFTLI 105


>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
           protein T20G5.5 protein.
          Length = 1234

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
 Frame = +1

Query: 109 KRSFARRKRPLVISFKKYH*YITKMFTFIFLFPFVPRYIVVL*-----L*RGVIHSHEAE 273
           K S  RR R + I  ++       MF  +FLF   P +   L      + R +    E E
Sbjct: 108 KASRRRRSRRVCIEVEEDRVVYVFMFRSLFLFLLHPSHQKWLLAKDEDIERKMERERERE 167

Query: 274 -SEHLLDYLYRVSSDLFILNNIVIGSATFCENYLYYIIIIR 393
            S  L+ +L+R++S+LF+   I+ GS   C + L   I+ R
Sbjct: 168 LSRSLIHFLFRITSNLFVF--ILFGS---CSSLLMERIVSR 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,257,871
Number of Sequences: 27780
Number of extensions: 161097
Number of successful extensions: 304
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)