Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K20
(821 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical ... 54 2e-07
AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical ... 52 7e-07
AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical ... 44 1e-04
U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z68008-1|CAA92002.1| 154|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 9.3
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 9.3
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 9.3
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 9.3
>U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical
protein F22A3.6a protein.
Length = 139
Score = 58.4 bits (135), Expect = 6e-09
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Frame = +1
Query: 166 LGLRISNLNSSCIRCLC-HVTGCDL--SHKCTDGY-CGPFYISRVYWVDAGKPTLPDDDP 333
L + I+ +++ C+ C+C +GC H CG + I Y+ D G+PT +
Sbjct: 9 LSVAIAYVSADCLHCICMRESGCKPIGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGET 68
Query: 334 NRKEAFEDCARDYNCSIRIVESYMAKFGKDCNGNGVTNCFDYMMINFHGG-RAC 492
+ A++ CA D NC+ VE+Y ++ CNG G+ C M N +GG R C
Sbjct: 69 T-EAAWKRCADDLNCATTCVENYYNRYKSQCNGLGMGAC-QIMSRNHNGGPRGC 120
>AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.3 protein.
Length = 139
Score = 53.6 bits (123), Expect = 2e-07
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +1
Query: 166 LGLRISNLNSSCIRCLC-HVTGCD-LSHKCTDGY--CGPFYISRVYWVDAGKPTLPDDDP 333
L + ++ ++ C+ C+C +GC + G CG + I Y+ D G+PT +
Sbjct: 9 LTIAVAYASADCLHCICMRESGCKPIGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGET 68
Query: 334 NRKEAFEDCARDYNCSIRIVESYMAKFGKDCNGNGVTNCFDYMMINFHGG 483
+ A++ CA D +C+ VE+Y ++ C G G C + M N +GG
Sbjct: 69 T-EAAWKRCANDLSCATTCVENYYNRYKSQCAGTGQGAC-EVMARNHNGG 116
>AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.2 protein.
Length = 139
Score = 51.6 bits (118), Expect = 7e-07
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Frame = +1
Query: 166 LGLRISNLNSSCIRCLC-HVTGCDL--SHKCTDGY-CGPFYISRVYWVDAGKPTLPDDDP 333
L + ++ ++ C+ C+C +GC H CG + I Y+ D G+P +
Sbjct: 9 LSIAVAYASADCLHCICMRESGCKPIGCHMDVGSLSCGYYQIKIPYYEDCGQPGKKHGE- 67
Query: 334 NRKEAFEDCARDYNCSIRIVESYMAKFGKDCNGNGVTNCFDYMMINFHGG-RAC 492
+ + A++ CA D C+ VE+Y ++ +C G G C + M N +GG R C
Sbjct: 68 STEVAWKRCADDLKCATNCVENYYNRYKHECAGTGQGAC-EVMARNHNGGPRGC 120
>AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical
protein C45G7.1 protein.
Length = 145
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 235 LSHKCTDGYC-GPFYISRVYWVDAGKPTLPDDDPNRKEAFEDCARDYNCSIRIVESYMAK 411
+S +C C G F I Y++D G+P + + + A++ CA D +C+ + +Y +
Sbjct: 17 ISDQCMHCMCLGNFVIKLPYYIDCGEPGKQRGE-STESAWKRCADDLDCAETCMMNYYHR 75
Query: 412 FGKDCNGNGVTNC 450
+ CNG G++ C
Sbjct: 76 YKSQCNGLGMSEC 88
>U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical
protein C55F2.2 protein.
Length = 159
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = +1
Query: 214 CHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPNRKEAFEDCARDYNCSIRIV 393
C GC + G CG F ++ + +P D+D EA+ +CA+DY CS +
Sbjct: 42 CVPLGCSVDQFDRIG-CGYFRLNIYQFQQCYQPGKKDED-TENEAWMNCAQDYQCSASCI 99
Query: 394 ESYMAKFGKDCNGNGVTNCFDYMMINFHGGRACSE 498
+ KF C G + C I+ G C +
Sbjct: 100 RTLATKFRVKCYGK--SECETIARIHDGGANGCRD 132
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 99 WFVVFRNVSVLFVWYYVSTLFRFGITYFKPKQLLYPMLVSRYRLRSVSQMHGRLLR 266
W++ V++ + Y+ +++F F P + Y + V R RLR + +M R R
Sbjct: 267 WYMPIFKVNIGYWTYWFASIFISFFPVFDPLAMFYFLPVFRVRLRQILRMKERPAR 322
>Z68008-1|CAA92002.1| 154|Caenorhabditis elegans Hypothetical
protein R08B4.3 protein.
Length = 154
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 179 IRNPKAEQSRHIIPNK*NGHISKNNKPKGHVTFIDIFKWTILNC 48
+ NP+ Q H+ K H+ + P+ H T+ +KWTI C
Sbjct: 65 LTNPE-NQKFHVFGAK-TAHLHFHGTPQSHATWYPGYKWTICLC 106
>Z70203-1|CAA94104.1| 456|Caenorhabditis elegans Hypothetical
protein C05G5.1 protein.
Length = 456
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 598 CIDLY*TRMWVVVKIDIVGSARAILDPVGLGIGARS 491
CI+ + WV++ I I G+A + P+GL +G +
Sbjct: 321 CINYEGVQWWVILSIFIFGAAGFSIYPIGLEMGVEA 356
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 366 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKCTIIDHNEN 409
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 366 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKCTIIDHNEN 409
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 437 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKCTIIDHNEN 480
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 366 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKCTIIDHNEN 409
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 366 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKCTIIDHNEN 409
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 199 CIRCLCHVTGCDLSHKCTDGYCGPFYISRVYWVDAGKPTLPDDDPN 336
C+ +C + C L+ +C P I R Y++ K T+ D + N
Sbjct: 437 CLNTICSILNCTLTIECEPAEDRPLGIGRAYFM--AKYTIIDHNEN 480
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,450,112
Number of Sequences: 27780
Number of extensions: 379281
Number of successful extensions: 1134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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