Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K19
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.3  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   7.3  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 120 LVNVLKAYCRNHRVLF*NHLS 182
           L  + +AYCR +   + NHLS
Sbjct: 304 LGRIFRAYCRENHASWVNHLS 324


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 15/58 (25%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +1

Query: 304 Y*IYIFSESVY*WMLVDFLD*LYLRFETIR*YN--IVVDIDLSQRYTVGFLISIYMIL 471
           Y I+IF  +V+ W+++   +  + R   ++     +++DI++  ++  GF+  IY+IL
Sbjct: 96  YLIFIFV-NVFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFM--IYLIL 150


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
 Frame = +3

Query: 36  FQCCFXX*ICSFIIFIV-----LCRFH-YCKFL 116
           F  C     C+FIIF V     LC +H +C F+
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFI 174



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 33  LFQCCFXX*ICSFIIFIVLCRFHYCKFLHL-VNVLKAYCRNHRVLF*NHLSC 185
           LF  C     C+FIIF +   F  C F+   +++L   C ++  L    L C
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLF-CCAFIFFNMHLLFLLCLDYFTLHLLFLPC 211


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/35 (22%), Positives = 22/35 (62%)
 Frame = +2

Query: 215 SELVTFLLGVGNIGFAAYRIVSIYRGSISDIESIY 319
           S+++ ++  + ++G A +R+ +      +D+E+IY
Sbjct: 183 SKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIY 217


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/35 (22%), Positives = 22/35 (62%)
 Frame = +2

Query: 215 SELVTFLLGVGNIGFAAYRIVSIYRGSISDIESIY 319
           S+++ ++  + ++G A +R+ +      +D+E+IY
Sbjct: 184 SKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIY 218


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/35 (22%), Positives = 22/35 (62%)
 Frame = +2

Query: 215 SELVTFLLGVGNIGFAAYRIVSIYRGSISDIESIY 319
           S+++ ++  + ++G A +R+ +      +D+E+IY
Sbjct: 184 SKIIEYMNHLVDLGVAGFRVDAAKHMWPADLEAIY 218


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +3

Query: 90  CRFHYCKFLHLVNV 131
           C   YC+  H+VN+
Sbjct: 498 CENEYCECTHVVNI 511


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 256 FCRVSNRIYISRINIGY 306
           FC + +++Y  R ++GY
Sbjct: 625 FCGIKDKLYPDRRSMGY 641


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 355 NLLASINIQIQKIYRFNIRY 296
           +LL S ++ ++  YR  IRY
Sbjct: 31  HLLGSSSLPLRSFYRSRIRY 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,802
Number of Sequences: 336
Number of extensions: 2155
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)