Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K18
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.6  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   6.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.3  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        22   8.3  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 19/87 (21%), Positives = 33/87 (37%)
 Frame = +1

Query: 577 RKTPSEKSDERSSPLQMSPTPAKSNADAIITSSASKLSYTPTSLSSHTETKETSSFKPSI 756
           R+TP    +    P  +SP    ++A     S   K ++  + +  +   +E S  + +I
Sbjct: 181 RRTPDPHDETAKKPRVLSPPLNNNDATPTDFSMGVKNNHVSSKVEGNGVHEENSPLEDNI 240

Query: 757 PVTSSAFLGGLPHSGFPFTNGFDDKQS 837
                   GG  +SG    N  D   S
Sbjct: 241 KCEPLELTGG--NSGNAAGNNEDSSDS 265


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 316 KLISAAEKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTP 441
           KL+   E+ ++      + ++N P F  Y + LT     R P
Sbjct: 238 KLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNP 279


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +1

Query: 316 KLISAAEKASKKYDDKPIHTDNKPSFKPYESCLTSREKTRTP 441
           KL+   E+ ++      + ++N P F  Y + LT     R P
Sbjct: 328 KLVEGLEEEAEGAITVELQSENIPGFDDYMASLTPDTNRRNP 369


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 782 PRKADDVTGMLGLKLEVSLVSVWDDKEVGVYDNL 681
           PR+    T   G+  +  L+SVW D +  VY  L
Sbjct: 49  PREPAQTTSKAGIHRKKVLLSVWWDYKGIVYFEL 82


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 782 PRKADDVTGMLGLKLEVSLVSVWDDKEVGVYDNL 681
           PR+    T   G+  +  L+SVW D +  VY  L
Sbjct: 171 PREPAQTTSKAGIHRKKVLLSVWWDYKGIVYFEL 204


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 187 TSSNQYLRPDYLSP 228
           TSS   +RPDYL P
Sbjct: 33  TSSFHEMRPDYLLP 46


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,194
Number of Sequences: 438
Number of extensions: 5890
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)