Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K16
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   6.7  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   6.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
 Frame = -2

Query: 557 IIIF*GTQFFSIKIVNVY---FVILLRYIE 477
           I++  G  F +I+ V++    FVIL RYIE
Sbjct: 168 IVVKSGVAFQTIEFVSIIRNRFVILNRYIE 197


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 661 HNNSQPAS*PASRQGLSHGNSMNFRHITSPSFTDASSYSKEPSFS 527
           H++S  ++ PA+R       + +     + +F  A+S S  PSFS
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFS 91


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -3

Query: 661 HNNSQPAS*PASRQGLSHGNSMNFRHITSPSFTDASSYSKEPSFS 527
           H++S  ++ PA+R       + +     + +F  A+S S  PSFS
Sbjct: 47  HSSSSASTSPAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFS 91


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 798 FCLN*IFVSHLKHCL*FLF 742
           FC   IF  HL  C  F+F
Sbjct: 170 FCAFIIFTMHLLFCCAFIF 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,925
Number of Sequences: 336
Number of extensions: 3956
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)