Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K13
         (818 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.17 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.92 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.92 
AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione tranfe...    26   1.2  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    25   2.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   3.7  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   4.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 61  IKTDFLNKILLIKMFAPNSRHLFLSAQLRRLQSTLGARRAQQ*GTISSNP 210
           + +DF    L I M  P++R L  +  L ++Q TLG +  +   TI  NP
Sbjct: 548 VASDFFKDALKINMENPDTRSLLGNLHLAKMQWTLGQKNFE---TILKNP 594


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.92
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +1

Query: 367 NPDSSDFGYTKTVQIHSYLSTSNCF---RKDGAA---TSCGQA*CVTNN*YHWY 510
           +PD +D  +    Q+H  +S  N F   R+ G A    SCG+   VTN  +H++
Sbjct: 493 SPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKE--VTNRWHHFH 544


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.92
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +1

Query: 367 NPDSSDFGYTKTVQIHSYLSTSNCF---RKDGAA---TSCGQA*CVTNN*YHWY 510
           +PD +D  +    Q+H  +S  N F   R+ G A    SCG+   VTN  +H++
Sbjct: 469 SPDGTDLPHHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKE--VTNRWHHFH 520


>AY255857-1|AAP13483.1|  216|Anopheles gambiae glutathione
           tranferase d9 protein.
          Length = 216

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 757 YNILSXSEXWSVRFGQFLL*KFNQISLIVALRCFIN 650
           YNILS      +  G+ L  KFN ISL V  + ++N
Sbjct: 5   YNILSPPSRAILLLGEALQLKFNLISLDVHRKDYVN 40


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 185 NEVLSPATQNTLNAAKKIG 241
           ++++SP+ QN L  AKK+G
Sbjct: 5   SDIVSPSCQNVLLVAKKLG 23


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +2

Query: 485  SPITDIIGIKDANTFVRTIYAGNAILTLEAK--DPIKVI-TVRGTA 613
            +PI D +G+K +      IY   +I+   AK  DP+ ++ TV+  A
Sbjct: 940  NPILDTLGVKISEPETCEIYTKRSIIRTIAKIYDPLGIVDTVKAKA 985


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 591 SSLFVVQHSLQSRWREGLQQLIKHL 665
           ++ F+ +  L   W EGLQ  +K+L
Sbjct: 381 TATFLTRGGLWLSWEEGLQHFLKYL 405


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,344
Number of Sequences: 2352
Number of extensions: 17263
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)