Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K13
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160913-1|AAD46853.2|  340|Drosophila melanogaster LD07532p pro...   329   3e-90
AF132155-1|AAD34743.1|  330|Drosophila melanogaster unknown prot...   329   3e-90
AE013599-1338|AAM68717.1|  330|Drosophila melanogaster CG8996-PB...   329   3e-90
AE013599-1337|AAF58627.1|  330|Drosophila melanogaster CG8996-PA...   329   3e-90
DQ177377-1|ABA60838.1|  528|Drosophila melanogaster Iris protein.      29   7.6  
DQ177376-1|ABA60837.1|  528|Drosophila melanogaster Iris protein.      29   7.6  
DQ177372-1|ABA60833.1|  528|Drosophila melanogaster Iris protein.      29   7.6  
DQ177369-1|ABA60830.1|  528|Drosophila melanogaster Iris protein.      29   7.6  

>AF160913-1|AAD46853.2|  340|Drosophila melanogaster LD07532p
           protein.
          Length = 340

 Score =  329 bits (808), Expect = 3e-90
 Identities = 158/222 (71%), Positives = 187/222 (84%)
 Frame = +2

Query: 152 CKVL*VLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANGISKVLV 331
           CK   V+AEHNNEVL+P T NT++AAKKIGGDV+VLVAGTKCGPA+E+++K +G++KVLV
Sbjct: 28  CKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCGPASEALSKVDGVTKVLV 87

Query: 332 AESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGI 511
           AE+  F GFTAE+LTPL+LA Q QFKFTHILA A+AFGK VLPRVAAKLDVSPI++II +
Sbjct: 88  AENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDV 147

Query: 512 KDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLV 691
           K  +TFVRTIYAGNAILTL++KD +KVITVR T FP     GGS A+++AP GD+ + L 
Sbjct: 148 KSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLS 207

Query: 692 EFLKQELTKSDRPXLTXAKNIVSGGRGLKSGDNFKLLYDLXD 817
           EF+ QELTKSDRP L  AK IVSGGRGLKSGDNFKLLYDL D
Sbjct: 208 EFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFKLLYDLAD 249


>AF132155-1|AAD34743.1|  330|Drosophila melanogaster unknown
           protein.
          Length = 330

 Score =  329 bits (808), Expect = 3e-90
 Identities = 158/222 (71%), Positives = 187/222 (84%)
 Frame = +2

Query: 152 CKVL*VLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANGISKVLV 331
           CK   V+AEHNNEVL+P T NT++AAKKIGGDV+VLVAGTKCGPA+E+++K +G++KVLV
Sbjct: 18  CKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCGPASEALSKVDGVTKVLV 77

Query: 332 AESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGI 511
           AE+  F GFTAE+LTPL+LA Q QFKFTHILA A+AFGK VLPRVAAKLDVSPI++II +
Sbjct: 78  AENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDV 137

Query: 512 KDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLV 691
           K  +TFVRTIYAGNAILTL++KD +KVITVR T FP     GGS A+++AP GD+ + L 
Sbjct: 138 KSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLS 197

Query: 692 EFLKQELTKSDRPXLTXAKNIVSGGRGLKSGDNFKLLYDLXD 817
           EF+ QELTKSDRP L  AK IVSGGRGLKSGDNFKLLYDL D
Sbjct: 198 EFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFKLLYDLAD 239


>AE013599-1338|AAM68717.1|  330|Drosophila melanogaster CG8996-PB,
           isoform B protein.
          Length = 330

 Score =  329 bits (808), Expect = 3e-90
 Identities = 158/222 (71%), Positives = 187/222 (84%)
 Frame = +2

Query: 152 CKVL*VLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANGISKVLV 331
           CK   V+AEHNNEVL+P T NT++AAKKIGGDV+VLVAGTKCGPA+E+++K +G++KVLV
Sbjct: 18  CKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCGPASEALSKVDGVTKVLV 77

Query: 332 AESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGI 511
           AE+  F GFTAE+LTPL+LA Q QFKFTHILA A+AFGK VLPRVAAKLDVSPI++II +
Sbjct: 78  AENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDV 137

Query: 512 KDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLV 691
           K  +TFVRTIYAGNAILTL++KD +KVITVR T FP     GGS A+++AP GD+ + L 
Sbjct: 138 KSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLS 197

Query: 692 EFLKQELTKSDRPXLTXAKNIVSGGRGLKSGDNFKLLYDLXD 817
           EF+ QELTKSDRP L  AK IVSGGRGLKSGDNFKLLYDL D
Sbjct: 198 EFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFKLLYDLAD 239


>AE013599-1337|AAF58627.1|  330|Drosophila melanogaster CG8996-PA,
           isoform A protein.
          Length = 330

 Score =  329 bits (808), Expect = 3e-90
 Identities = 158/222 (71%), Positives = 187/222 (84%)
 Frame = +2

Query: 152 CKVL*VLAEHNNEVLSPATQNTLNAAKKIGGDVSVLVAGTKCGPAAESIAKANGISKVLV 331
           CK   V+AEHNNEVL+P T NT++AAKKIGGDV+VLVAGTKCGPA+E+++K +G++KVLV
Sbjct: 18  CKSTLVVAEHNNEVLNPITLNTISAAKKIGGDVTVLVAGTKCGPASEALSKVDGVTKVLV 77

Query: 332 AESDVFKGFTAETLTPLILATQKQFKFTHILAPATAFGKTVLPRVAAKLDVSPITDIIGI 511
           AE+  F GFTAE+LTPL+LA Q QFKFTHILA A+AFGK VLPRVAAKLDVSPI++II +
Sbjct: 78  AENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAKLDVSPISEIIDV 137

Query: 512 KDANTFVRTIYAGNAILTLEAKDPIKVITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLV 691
           K  +TFVRTIYAGNAILTL++KD +KVITVR T FP     GGS A+++AP GD+ + L 
Sbjct: 138 KSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSLS 197

Query: 692 EFLKQELTKSDRPXLTXAKNIVSGGRGLKSGDNFKLLYDLXD 817
           EF+ QELTKSDRP L  AK IVSGGRGLKSGDNFKLLYDL D
Sbjct: 198 EFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFKLLYDLAD 239


>DQ177377-1|ABA60838.1|  528|Drosophila melanogaster Iris protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 548 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQEL 712
           G+ IL++++   ++   +T+RG      P +GG A + K P+   ++  +E   Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLL 444


>DQ177376-1|ABA60837.1|  528|Drosophila melanogaster Iris protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 548 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQEL 712
           G+ IL++++   ++   +T+RG      P +GG A + K P+   ++  +E   Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLL 444


>DQ177372-1|ABA60833.1|  528|Drosophila melanogaster Iris protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 548 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQEL 712
           G+ IL++++   ++   +T+RG      P +GG A + K P+   ++  +E   Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLL 444


>DQ177369-1|ABA60830.1|  528|Drosophila melanogaster Iris protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 548 GNAILTLEAKDPIK--VITVRGTAFPAEPLEGGSAAIDKAPEGDYKTDLVEFLKQEL 712
           G+ IL++++   ++   +T+RG      P +GG A + K P+   ++  +E   Q L
Sbjct: 388 GSGILSIQSDCAVRSPAVTIRGEVREGVPSKGGYATLQKDPKSSRESVTLESFNQLL 444


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,426,719
Number of Sequences: 53049
Number of extensions: 717725
Number of successful extensions: 2289
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)