Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K12
         (812 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.54 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   3.8  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.8  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -3

Query: 579 CI*IYYTRNSFQNHWHHGYMNVNFVNQ--SFLKSFFRTSTDLMHILR 445
           C  +YY R  +++ WH     ++F+     FL + F ++  LM + R
Sbjct: 116 CYAVYYWRQQYEDFWHR--YTLSFIENYCQFLYNCFHSTLLLMILSR 160


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 79  ILGQYFSIISFL*SESAVLLVI 14
           +LG YF+ I F+ + S VL V+
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVV 294


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 79  ILGQYFSIISFL*SESAVLLVI 14
           +LG YF+ I F+ + S VL V+
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVV 294


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 79  ILGQYFSIISFL*SESAVLLVI 14
           +LG YF+ I F+ + S VL V+
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVV 294


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 141 TKGKYYLLVITYICTTNC*CYNISKL*FSEKDVIEKV 251
           T   + ++ +   C  NC  Y I    F + DV+ KV
Sbjct: 206 TMAHFKIIQVVPYCYINCLIYLIGGFWFMQCDVVGKV 242


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 281 LSSSSFIVFKYFFNYIFFTK 222
           L S++ +V   FF+ ++FTK
Sbjct: 5   LGSTTMMVLNLFFSQMYFTK 24


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 729 LFENCKGELNIKIRLMQIMIL 667
           LFEN K + NIK+ + ++ I+
Sbjct: 340 LFENKKRKNNIKLYVRRVFIM 360


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 109 YSNIHS*INKILGQYFSI 56
           + +IH+ IN  LGQ F++
Sbjct: 243 FPSIHNSINPFLGQGFAV 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,375
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)