Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K12
(812 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 24 1.5
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 24 1.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 24 1.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 24 1.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 24 1.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 24 1.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 24 1.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 24 1.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 24 1.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.9
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.9
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.9
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 79 ILGQYFSIISFL*SESAVLLVI 14
+LG YF+ I F+ + S VL V+
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVL 277
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 79 ILGQYFSIISFL*SESAVLLVI 14
+LG YF+ I F+ + S VL V+
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVL 277
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 79 ILGQYFSIISFL*SESAVLLVI 14
+LG YF+ I F+ + S VL V+
Sbjct: 256 LLGSYFNCIMFMVASSVVLTVL 277
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 79 ILGQYFSIISFL*SESAVLLVI 14
+LG YF+ I F+ + S VL V+
Sbjct: 324 LLGSYFNCIMFMVASSVVLTVL 345
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQ 110
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQ 110
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQ 110
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 89 YNYNNYNNNYKPLYYNINYIEQ 110
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQ 343
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQ 343
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 322 YNYNNYNNNYKPLYYNINYIEQ 343
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.8 bits (49), Expect = 1.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N++ Y N+N++ Q
Sbjct: 311 YNYNNYNNNYKPLYYNINYIEQ 332
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N+ Y N+N++ Q
Sbjct: 100 YNNNNYNNNCKKLYYNINYIEQ 121
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N+ Y N+N++ Q
Sbjct: 100 YNNNNYNNNCKKLYYNINYIEQ 121
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N+ Y N+N++ Q
Sbjct: 100 YNNNNYNNNCKKLYYNINYIEQ 121
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N++ N+ Y N+N++ Q
Sbjct: 100 YNNNNYNNNCKKLYYNINYIEQ 121
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -3
Query: 564 YTRNSFQNHWHHGYMNVNFVNQ 499
Y N+ N++ Y N+N++ Q
Sbjct: 97 YNNNNNYNNYKKLYYNINYIEQ 118
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.9
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -3
Query: 555 NSFQNHWHHGYMNVNFVNQ 499
N++ N++ Y N+N++ Q
Sbjct: 342 NNYNNNYKKLYYNINYIEQ 360
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 394 AAVTKCNKDYSKFAENQSQ 450
A+VT NK+Y+KF + +
Sbjct: 441 ASVTPYNKNYTKFCSTEKR 459
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,923
Number of Sequences: 438
Number of extensions: 3983
Number of successful extensions: 29
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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