Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K09
(870 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 128 1e-30
SPBC36.06c |spo9||farnesyl pyrophosphate synthetase|Schizosaccha... 79 6e-16
SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase Mag1|Schizo... 32 0.092
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 30 0.49
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 30 0.49
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 29 0.86
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 29 1.1
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 28 2.0
SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces ... 27 3.5
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 27 3.5
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 27 4.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 8.0
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 128 bits (308), Expect = 1e-30
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 1/176 (0%)
Frame = +1
Query: 346 ERETFQDAWKGIIDNLTTNKKFTQLPE-LGSWVKKVLEYNVKGGKKIRGITTVLAYELFE 522
+R F+ A +D + K +P+ + W K L +N GGK RG++ + +YE+
Sbjct: 6 KRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL- 64
Query: 523 KPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDA 702
+ E A V GW E+LQ++ ++ DDIMD S TRRG PCWY MP VG AINDA
Sbjct: 65 LGHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAINDA 124
Query: 703 ILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
+V +IY +LK +F + Y D++++F++ T +GQ LD A + D F
Sbjct: 125 FMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKF 180
>SPBC36.06c |spo9||farnesyl pyrophosphate
synthetase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 351
Score = 79.4 bits (187), Expect = 6e-16
Identities = 46/126 (36%), Positives = 65/126 (51%)
Frame = +1
Query: 451 LEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDG 630
++ N GGK RG+ + + E + E R A + GW E+LQ +M DDIMD
Sbjct: 47 IKRNTLGGKNNRGLAVLQSLTSLINRE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQ 105
Query: 631 SSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTS 810
S RRG+ CWY + V AIN++ L+ I +++ YF Y D+LD F E T
Sbjct: 106 SIKRRGLDCWYLVVGV-RRAINESQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTE 164
Query: 811 MGQHLD 828
+GQ D
Sbjct: 165 LGQQED 170
>SPAPB24D3.04c |mag1||DNA-3-methyladenine glycosylase
Mag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 228
Score = 32.3 bits (70), Expect = 0.092
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 529 ENVTEEMVRLARVAGWCTEMLQAYLIMNDDIM--DGSSTRRGVPCWYRMPDV 678
E + E + ++ + W EML + + DD+M D S R G +R+P +
Sbjct: 135 EELIERLTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKI 186
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 519 RETGKRYRRDGEVSTCRRLVYGNAAGVLDNE 611
+E GKR+ + TC RL Y A GV++ +
Sbjct: 545 KEIGKRWFGKTVIKTCARLAYSEAQGVIEGK 575
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 29.9 bits (64), Expect = 0.49
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 661 TSTGPRAGSTTRPLYRRSLS-STPAAFPYTNRRHVLTSPS 545
+S PR G + P+ RS + FPY N+R+ +T+PS
Sbjct: 450 SSEMPRTGMSALPMRPRSQNVDKHRKFPYYNKRNAVTTPS 489
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 29.1 bits (62), Expect = 0.86
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 535 VTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVP 654
+ +RLA++ TEM+ +++DD++D ++ RRG P
Sbjct: 115 ILPSQLRLAQI----TEMIHIASLLHDDVIDHANVRRGSP 150
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 301 RCSSAYAASVSQIAKERETFQDAWKGIIDNLTTNKKF 411
R S ++ ++A E+E +DA K + + TNKK+
Sbjct: 16 RFPSKHSEIEDEVANEKEELKDATKSALGEVKTNKKY 52
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 469 GGKKIRGITTV-LAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRR 645
G + GI T+ LA K NV + ++ + +I ++++MD + ++
Sbjct: 181 GANSMVGIATIQLAKHFGYKSINVVRNRPDIEKLKEQLKSLGATIVITDEELMDRKTMKQ 240
Query: 646 GVPCWYRMPDVGLG 687
VP W + +V LG
Sbjct: 241 KVPEWIQGGEVKLG 254
>SPAC17A5.11 |rec12|spo11|endonuclease Rec12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 454 EYNVKGGKK-IRGITTVLAYELFEKPENVTEEMVRL 558
E+++K K+ I+ ITT+L +E F+K V E++ R+
Sbjct: 275 EFSLKLNKRDIKMITTLLQFEGFQKEPVVREQLQRM 310
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 27.1 bits (57), Expect = 3.5
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2
Query: 410 NFLFVVRLSIIPFQASWNVSLSF 342
N+LF V LS P QASWN+ SF
Sbjct: 342 NYLFSVVLS--PHQASWNIYNSF 362
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 716 VLYTKYSRYISGKLKNTQTSWTFSTRLF-SIRAWDNI*ITPWRTATNKTTV 865
V +T+++ +SG + + + FS+ L S+RAWD I +RT T + V
Sbjct: 375 VTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRV 425
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.8 bits (54), Expect = 8.0
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = -2
Query: 629 PSIISSFIIKYACSISVHQPATRANLTISSVTFSGFSNNS*ASTVVMPLIFLPPLTLYSK 450
PS ISS I + +S P+T + + SS SG S+ +S +P+ L+ YS
Sbjct: 611 PSSISSSISSSSTILSSPTPSTSSLMISSSSIISGSSSILSSSISTIPI--SSSLSTYSS 668
Query: 449 TFLTQLPSSGSCVNFLFVVRLSIIPFQAS 363
+ +PSS + V+ + +S P +S
Sbjct: 669 SV---IPSSSTLVSSSSSLIVSSSPVASS 694
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,307,104
Number of Sequences: 5004
Number of extensions: 67571
Number of successful extensions: 181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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