Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K09
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   6.9  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.2  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = +3

Query: 516  IRETGKRYRRDGEVSTCRRLVYGNAAGVLDNERRYNGRVVDPAR 647
            +R  G+RYRR   V   RR + G++ G + ++   +G +V+ +R
Sbjct: 1141 VRSLGERYRRQLLVVEERRQISGHSVGGVTSQE--DGTLVEASR 1182


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +3

Query: 540 RRDGEVSTCRRLVYGNAAGVLDNERRYNGRVVDPARGPVLVP 665
           RR  E  +  RL  G+   +L + RR+ G  V+ +   VL+P
Sbjct: 145 RRINEYQSDGRLAEGSRQMLLRHMRRFEGYPVNISLSSVLLP 186


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 661 TSTGPRAGSTTRPLYRRSLSSTPAAFPY 578
           T T    GS T PLY+    + P +F +
Sbjct: 312 TPTSSGIGSRTHPLYQPDHRAEPTSFDF 339


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,465
Number of Sequences: 2352
Number of extensions: 16639
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)