Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K09
(870 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 133 7e-31
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 132 1e-30
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 132 1e-30
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 132 1e-30
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 132 1e-30
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 121 4e-27
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 105 2e-22
BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein. 35 0.44
BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosph... 35 0.44
AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosph... 35 0.44
AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl pyropho... 35 0.44
AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl pyrophos... 35 0.44
AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl pyrophos... 35 0.44
AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosph... 35 0.44
AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein. 35 0.44
BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein. 34 0.77
BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein. 34 0.77
AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase... 34 0.77
AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase... 34 0.77
AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl... 34 0.77
AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase... 34 0.77
AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase... 33 1.8
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 133 bits (322), Expect = 7e-31
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ LT ++ PE+G + K+VLEYN GGK RG+T V+A+
Sbjct: 11 AQEKQDFVQHFSQIVRVLTEDEMGH--PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 68
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
+P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 69 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLDA 128
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
INDA L+ IY +LK+Y + Y +++++F ++ T +GQ LD A + D F
Sbjct: 129 INDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRF 188
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 132 bits (320), Expect = 1e-30
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ LT ++ PE+G + K+VLEYN GGK RG+T V+A+
Sbjct: 4 AQEKQDFVQHFSQIVRVLTEDEMGH--PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 61
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
+P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 62 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 121
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
INDA L+ IY +LK+Y + Y +++++F ++ T +GQ LD A + D F
Sbjct: 122 INDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRF 181
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 132 bits (320), Expect = 1e-30
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ LT ++ PE+G + K+VLEYN GGK RG+T V+A+
Sbjct: 78 AQEKQDFVQHFSQIVRVLTEDEMGH--PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 135
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
+P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 136 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 195
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
INDA L+ IY +LK+Y + Y +++++F ++ T +GQ LD A + D F
Sbjct: 196 INDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRF 255
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 132 bits (320), Expect = 1e-30
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ LT ++ PE+G + K+VLEYN GGK RG+T V+A+
Sbjct: 77 AQEKQDFVQHFSQIVRVLTEDEMGH--PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
+P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 194
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
INDA L+ IY +LK+Y + Y +++++F ++ T +GQ LD A + D F
Sbjct: 195 INDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRF 254
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 132 bits (320), Expect = 1e-30
Identities = 70/180 (38%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ LT ++ PE+G + K+VLEYN GGK RG+T V+A+
Sbjct: 77 AQEKQDFVQHFSQIVRVLTEDEMGH--PEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
+P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 194
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
INDA L+ IY +LK+Y + Y +++++F ++ T +GQ LD A + D F
Sbjct: 195 INDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQGNVDLVRF 254
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 121 bits (291), Expect = 4e-27
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Frame = +1
Query: 340 AKERETFQDAWKGIIDNLTTNKKFTQLPELGSWV---KKVLEYNVKGGKKIRGITTVLAY 510
A+E++ F + I+ + T + PE+G + K+VLEYN GGK R +T +A+
Sbjct: 6 AQEKQDFVQHFSQIV-RVPTEDEMGH-PEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAF 63
Query: 511 ELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGA 690
P + ++ A GWC E+LQA+ ++ DDIMD S TRRG CWY+ P VGL A
Sbjct: 64 RELVDPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 123
Query: 691 INDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYXLF 870
I+DA L+ IY +LK+Y + Y +++++F ++ T +GQ LD + D F
Sbjct: 124 IDDANLLEACIYPLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTXPQGNVDLVRF 183
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 105 bits (252), Expect = 2e-22
Identities = 50/130 (38%), Positives = 80/130 (61%)
Frame = +1
Query: 439 VKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDD 618
+K+VLEYN GGK RG+ ++A+ +P + + ++ A GW ++LQA+ ++ DD
Sbjct: 13 LKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQLLQAFFLVADD 72
Query: 619 IMDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEAL 798
IMD S T +G WY+ +GL AINDAIL+ IY +LK+Y + Y +++++F +
Sbjct: 73 IMDSSLTCQGQISWYQKLGMGLDAINDAILLEACIYCLLKLYCREQPYYLNLMELFQQNS 132
Query: 799 LYTSMGQHLD 828
T +GQ LD
Sbjct: 133 YQTEIGQTLD 142
>BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHQDAVKLFTRQLLELHQGQGLD 129
>BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthetase protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein.
Length = 300
Score = 34.7 bits (76), Expect = 0.44
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = +1
Query: 580 TEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAILVYG-SIYEILKIYFGKA 756
TEML ++ DDI D S RRG P + + + IN A VY + ++L +
Sbjct: 53 TEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIP-SVINSANYVYFLGLEKVLTL----- 106
Query: 757 KEYADILDIFNEALLYTSMGQHLD 828
++ D + +F LL GQ LD
Sbjct: 107 -DHPDAVKLFTRQLLELHQGQGLD 129
>BC063635-1|AAH63635.1| 306|Homo sapiens PDSS1 protein protein.
Length = 306
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 610 NDDIMDGSSTRRG 648
+DD++D +S+RRG
Sbjct: 179 HDDVIDDASSRRG 191
>BC049211-1|AAH49211.1| 414|Homo sapiens PDSS1 protein protein.
Length = 414
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 118 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 177
Query: 610 NDDIMDGSSTRRG 648
+DD++D +S+RRG
Sbjct: 178 HDDVIDDASSRRG 190
>AL390961-9|CAI17280.1| 415|Homo sapiens trans-prenyltransferase
(TPT) protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 610 NDDIMDGSSTRRG 648
+DD++D +S+RRG
Sbjct: 179 HDDVIDDASSRRG 191
>AF118395-1|AAD28559.1| 376|Homo sapiens trans-prenyltransferase
protein.
Length = 376
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +1
Query: 439 VKKVLEY--NVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMN 612
+K++ EY +VKG K R I VL N + + R EM+ +++
Sbjct: 82 LKEISEYYFDVKG-KAFRPIIVVLMARACNIHHNNSRHVQASQRAIALIAEMIHTASLVH 140
Query: 613 DDIMDGSSTRRG 648
DD++D +S+RRG
Sbjct: 141 DDVIDDASSRRG 152
>AB210838-1|BAE48216.1| 415|Homo sapiens subunit 1 of decaprenyl
diphosphate synthase protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 610 NDDIMDGSSTRRG 648
+DD++D +S+RRG
Sbjct: 179 HDDVIDDASSRRG 191
>AB209763-1|BAD93000.1| 297|Homo sapiens trans-prenyltransferase
variant protein.
Length = 297
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 126 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 185
Query: 610 NDDIMDGSSTRRG 648
+DD++D +S+RRG
Sbjct: 186 HDDVIDDASSRRG 198
>AK223414-1|BAD97134.1| 415|Homo sapiens trans-prenyltransferase
variant protein.
Length = 415
Score = 32.7 bits (71), Expect = 1.8
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +1
Query: 433 SWVKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIM 609
S +K++ EY G GK R I L N + + R EM+ ++
Sbjct: 119 SELKEMSEYYFDGKGKAFRPIIVALMARACNIHHNNSRHVQASQRAIALIAEMIHTASLV 178
Query: 610 NDDIMDGSSTRRG 648
+DD++D S+RRG
Sbjct: 179 HDDVIDDVSSRRG 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,996,064
Number of Sequences: 237096
Number of extensions: 2337752
Number of successful extensions: 7948
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7948
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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