Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K08
         (638 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q92BG4 Cluster: ComC protein; n=11; Listeria|Rep: ComC ...    36   0.82 
UniRef50_A6FJW6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.4  
UniRef50_Q8EWR7 Cluster: Putative uncharacterized protein MYPE13...    33   5.8  
UniRef50_Q08M23 Cluster: Cytochrome P450; n=3; Pezizomycotina|Re...    33   5.8  

>UniRef50_Q92BG4 Cluster: ComC protein; n=11; Listeria|Rep: ComC
           protein - Listeria innocua
          Length = 236

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 21/62 (33%), Positives = 32/62 (51%)
 Frame = -2

Query: 511 YPFGFGFRILNGILIT*SVKRWRYYVITFFNTNDIVHLHC*LNSILHLFLNTLIYTFIQY 332
           Y F F +R + G +I        YY + FF   DI++LH   NS++ LF   L+  +I +
Sbjct: 89  YQFSFSYRFVIGCII--------YYFLAFFFVTDILYLHV-PNSVMILFFLVLLTCYISF 139

Query: 331 LQ 326
            Q
Sbjct: 140 QQ 141


>UniRef50_A6FJW6 Cluster: Putative uncharacterized protein; n=1;
           Roseobacter sp. AzwK-3b|Rep: Putative uncharacterized
           protein - Roseobacter sp. AzwK-3b
          Length = 632

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 404 HNVICIKKSDYIVTPSLDTSSNQNAIQNPETKPEWVHKLIRDGDLLH 544
           H ++CI++ D  +  + D  SN N +    T+  W +K +RD +  H
Sbjct: 376 HALVCIRRDDARLVVTFDNLSNVNDLSF--TREPWAYKFVRDNNCSH 420


>UniRef50_Q8EWR7 Cluster: Putative uncharacterized protein MYPE1350;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE1350 - Mycoplasma penetrans
          Length = 351

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 19/51 (37%), Positives = 28/51 (54%)
 Frame = +2

Query: 137 CWISRSYRNWRLFGQLLMETKNHPREIRNVFWLFWFHLPWNSEVQTNVPIS 289
           C+      NWR + +LL+ TK +P+EI N F +F F L   + V +   IS
Sbjct: 198 CFSYPLLNNWRKYKKLLLITKENPKEISN-FSIFVFDLLKQASVVSRAFIS 247


>UniRef50_Q08M23 Cluster: Cytochrome P450; n=3; Pezizomycotina|Rep:
           Cytochrome P450 - Phaeosphaeria sp. (strain L487)
          Length = 528

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = +2

Query: 131 QNCWISRSYRNWRLFGQLLMETKNHPREIRN 223
           Q C+ +R +R W  +G++LM T ++  EIRN
Sbjct: 83  QKCYSNRPFRIWTDWGEVLMLTPDYAHEIRN 113


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,253,478
Number of Sequences: 1657284
Number of extensions: 11916165
Number of successful extensions: 25289
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25283
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)