Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_K04
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.094
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.094
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.094
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.094
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.88 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   1.5  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.7  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 345 VPDLLHVIPVGDDTVLD 295
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 345 VPDLLHVIPVGDDTVLD 295
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 345 VPDLLHVIPVGDDTVLD 295
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.094
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 345 VPDLLHVIPVGDDTVLD 295
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 307 IITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 402
           ++T+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 103 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRXVMVGM 225
           R+  T+ P   RP+ PAT    P      +A   R +M G+
Sbjct: 28  RVLPTVEPGYLRPLIPATAPQKPDKWEDVMADIERVIMPGV 68


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 762 LLLEXEGDIAELLLDVTNDFP 700
           L+ + E +  ++LLDV N FP
Sbjct: 465 LVYQNEAEEVKILLDVINHFP 485


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 93  DVAALVVDNGSGMCKAGFAGDDAPRAV-FPSIVGRPRHQGRDGRYGPERL 239
           D+   VVD G  M K          AV FP ++ + +   R G YGP+ +
Sbjct: 233 DLIRKVVD-GMAMAKLNVLHLHLTDAVSFPIVLPKVQELARFGAYGPDMI 281


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,707
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)