Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K04
(766 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 384 e-107
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 384 e-107
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 383 e-107
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 380 e-106
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 281 6e-76
SB_54| Best HMM Match : Actin (HMM E-Value=0) 219 2e-57
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 218 3e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 218 5e-57
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 203 1e-52
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 4e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 79 5e-15
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 66 2e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 54 2e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 46 3e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.44
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.3
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.8
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 3.1
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 4.1
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 5.4
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 5.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 7.2
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 28 9.5
SB_44729| Best HMM Match : SET (HMM E-Value=0) 28 9.5
SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 9.5
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 9.5
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 9.5
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 9.5
SB_10531| Best HMM Match : SET (HMM E-Value=0) 28 9.5
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 384 bits (945), Expect = e-107
Identities = 180/185 (97%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 222
Query: 751 FEQEM 765
FEQEM
Sbjct: 223 FEQEM 227
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +3
Query: 87 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 384 bits (945), Expect = e-107
Identities = 180/185 (97%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 380 bits (936), Expect = e-106
Identities = 179/185 (96%), Positives = 182/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALD 222
Query: 751 FEQEM 765
FEQEM
Sbjct: 223 FEQEM 227
Score = 90.2 bits (214), Expect = 2e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 87 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 281 bits (688), Expect = 6e-76
Identities = 145/185 (78%), Positives = 149/185 (80%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------- 156
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
G + H + I ERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 157 -----GDGVSHTV---------------PIYEERGYSFTTTAEREIVRDIKEKLCYVALD 196
Query: 751 FEQEM 765
FEQEM
Sbjct: 197 FEQEM 201
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 219 bits (535), Expect = 2e-57
Identities = 97/144 (67%), Positives = 122/144 (84%)
Frame = +1
Query: 334 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 513
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 514 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 693
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 694 AEREIVRDIKEKLCYVALXFEQEM 765
AE++I+RD+KE LCY A+ +E+E+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYEREL 2272
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 206
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 218 bits (533), Expect = 3e-57
Identities = 98/178 (55%), Positives = 130/178 (73%), Gaps = 1/178 (0%)
Frame = +1
Query: 232 KDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 408
KD VGDEA R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 409 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 588
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 589 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXFEQE 762
+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV EQE
Sbjct: 173 FALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQE 230
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 99 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 197
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 218 bits (532), Expect = 5e-57
Identities = 104/113 (92%), Positives = 109/113 (96%)
Frame = +1
Query: 427 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 606
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 607 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXFEQEM 765
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL FEQEM
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 190
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTF 354
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 91.5 bits (217), Expect = 7e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +3
Query: 87 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 203 bits (496), Expect = 1e-52
Identities = 96/106 (90%), Positives = 101/106 (95%)
Frame = +1
Query: 448 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 627
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 628 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXFEQEM 765
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVAL F QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 4e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +1
Query: 382 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 561
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 562 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 729
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 3e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +1
Query: 292 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 471
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 472 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 651
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 652 MKILTE 669
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 78.6 bits (185), Expect = 5e-15
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +1
Query: 493 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 669
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 670 RGYSFTTTAEREIVRDIKEKLCYVA 744
RG++FT+++ +IV DIKEK+CY++
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLS 851
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 75 FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 200
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Frame = +1
Query: 487 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 642
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 643 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXFEQE 762
++ ++L ER E + IKE+ Y+ +E
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKE 139
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 206
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/60 (40%), Positives = 33/60 (55%)
Frame = +1
Query: 220 GMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 399
G+ D ++GDEA T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 529 TGIVLDSGDGVSHTVPI 579
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 203 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 87
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Frame = +1
Query: 127 ACARPVSPATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSXRGILTLKY--PIE 300
AC++ + A+ + AP S P+ + A ++ ++GD+ + + L Y P +
Sbjct: 242 ACSQKIGFASNQ-APRSIPNAIFKAKSE------RRKLFIGDQIEECKDYSALFYVLPFQ 294
Query: 301 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 480
G + NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 295 KGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKAL 334
Query: 481 YVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 615
A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 335 SRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 96 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 212
+A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 337 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 516
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 517 SGRTTGIV 540
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 705 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 538
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 537 DTGGTTGGVQ 508
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 76 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 180
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 244 VGDEAQSXRGIL-TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPL 414
VG++ S I L+ P + ++T+++ E++ H F + P HPV++TE
Sbjct: 117 VGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVC 176
Query: 415 NPKANRE 435
NP R+
Sbjct: 177 NPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 424 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 540
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 669 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 526
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 76 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 180
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 629 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 450
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 449 IWVIFSLLALGLR 411
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 67 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 180
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 4.1
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 569 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 417
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 416 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 252
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 612 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 514
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 427 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 576
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 1 RPADDSQSRCRRVNTSRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSS 177
RPA RR S P T S C +L+R T+ APA P SPAT P
Sbjct: 391 RPAQRPLPADRR---SEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPI 447
Query: 178 R 180
R
Sbjct: 448 R 448
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 253 RHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 119
RH R LS Y P W + G T R PAKP+L++P P
Sbjct: 520 RHYNR-LSNQY----PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 412 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 540
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 61 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 186
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 76 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 180
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -1
Query: 265 CSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPAL 134
C+ P S GP R S P RG PT +RG +P K A+
Sbjct: 1301 CTTPHRSSASF-GPNRVSTPK-RGSPTSRNTPSRGLRTPVKTAM 1342
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 444 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSX 265
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D S
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 264 AL 259
++
Sbjct: 214 SV 215
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 10 DDSQSRCRRVNTSRPQHKHTQSSRCATTMLLRL*STMAPAC 132
D ++ +R PQ+KH ++++C T + L + P C
Sbjct: 715 DKAEQDLQRFCKKPPQYKHIKTNKCTTAQRIILDPSEMPVC 755
>SB_30644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1887
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Frame = +1
Query: 22 SRCRRVNTSRPQHKHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS---WV 192
S C+ V S T+SS C ++RL + ARP P+ P+ W
Sbjct: 941 SECKSVTQSSECKGVTKSSECKIVAVIRLVEENVLSSARPGVPSIVLIVSFGSPTSTEWS 1000
Query: 193 ALATRXVMVGMGQKDSYVG 249
L +R + MG VG
Sbjct: 1001 LLISRRGLRSMGAHVFVVG 1019
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 76 SRCATTMLLR-L*STMAPACARPVSPAT 156
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 578 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 402
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 401 VSSTGCSSGATRSSL*KVW 345
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 76 SRCATTMLLR-L*STMAPACARPVSPAT 156
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 76 SRCATTMLLR-L*STMAPACARPVSPAT 156
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_10531| Best HMM Match : SET (HMM E-Value=0)
Length = 287
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 10 DDSQSRCRRVNTSRPQHKHTQSSRCATTMLLRL*STMAPAC 132
D ++ +R PQ+KH ++++C T + L + P C
Sbjct: 82 DKAEQDLQRFCKKPPQYKHIKTNKCTTAQRIILDPSEMPVC 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,196,614
Number of Sequences: 59808
Number of extensions: 505872
Number of successful extensions: 1799
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1794
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2072022557
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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