Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_K04
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 384 e-107
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 384 e-107
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 383 e-107
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 383 e-107
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 383 e-107
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 383 e-107
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 383 e-107
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 383 e-107
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 383 e-107
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 382 e-106
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 368 e-102
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 239 2e-63
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 219 1e-57
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 169 2e-42
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 6e-27
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 9e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 97 9e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 96 3e-20
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 69 5e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 69 5e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.68
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.90
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 0.90
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.90
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 0.90
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 0.90
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 30 2.1
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 6.3
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 28 6.3
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 8.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.4
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 8.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 384 bits (944), Expect = e-107
Identities = 180/185 (97%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 384 bits (944), Expect = e-107
Identities = 180/185 (97%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 30 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 89
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 90 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 149
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 150 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 209
Query: 751 FEQEM 765
FEQEM
Sbjct: 210 FEQEM 214
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +3
Query: 135 KAGFAGDDAPRAVFPSIVGRPRHQG 209
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 179/185 (96%), Positives = 183/185 (98%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHT 163
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
Query: 751 FEQEM 765
FEQEM
Sbjct: 224 FEQEM 228
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 382 bits (939), Expect = e-106
Identities = 178/184 (96%), Positives = 182/184 (98%)
Frame = +1
Query: 214 MVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 393
MVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 394 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTV 573
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 574 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALXF 753
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL F
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 180
Query: 754 EQEM 765
EQEM
Sbjct: 181 EQEM 184
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 368 bits (905), Expect = e-102
Identities = 170/185 (91%), Positives = 179/185 (96%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 390
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHP 102
Query: 391 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 570
VLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HT
Sbjct: 103 VLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHT 162
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
VPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA
Sbjct: 163 VPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHD 222
Query: 751 FEQEM 765
FE E+
Sbjct: 223 FESEL 227
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/41 (90%), Positives = 41/41 (100%)
Frame = +3
Query: 87 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 239 bits (585), Expect = 2e-63
Identities = 106/180 (58%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEH 387
VM G D ++G +A+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 388 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSH 567
PVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTH 165
Query: 568 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVAL 747
VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++KE CY+AL
Sbjct: 166 AVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLAL 225
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Frame = +3
Query: 87 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 203
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 219 bits (536), Expect = 1e-57
Identities = 106/206 (51%), Positives = 144/206 (69%), Gaps = 1/206 (0%)
Frame = +1
Query: 148 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDD 327
PA P+ RP + +T+ V + KD VG+E R +L + YP+++GI+ NWDD
Sbjct: 28 PAHIFPSMVGRP--IVRSTQRVG-NIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDD 84
Query: 328 MEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVL 504
M +W HTF E L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL
Sbjct: 85 MAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVL 144
Query: 505 SLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 684
+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F
Sbjct: 145 TLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNF 204
Query: 685 TTTAEREIVRDIKEKLCYVALXFEQE 762
+A+ E VR +KEKLCY+A EQE
Sbjct: 205 NHSADFETVRQMKEKLCYIAYDVEQE 230
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 105 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 197
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 169 bits (411), Expect = 2e-42
Identities = 81/186 (43%), Positives = 115/186 (61%), Gaps = 9/186 (4%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEH 387
V G+ D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 388 PVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVL 543
LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVI 175
Query: 544 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 723
DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IK
Sbjct: 176 DSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIK 235
Query: 724 EKLCYV 741
EK CYV
Sbjct: 236 EKFCYV 241
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 188
M + A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 6e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +1
Query: 295 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 474
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 475 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 654
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 655 KILTER 672
++L ++
Sbjct: 214 QMLDQQ 219
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 90 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 188
D+V+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKI 339
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 97.5 bits (232), Expect = 9e-21
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDM 330
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDM
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKI 339
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +3
Query: 81 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 209
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +1
Query: 211 VMVGMGQKDSYVGDEAQSXRGILTLKYPIEHGIITNWDDMEKI 339
VMVGMGQKDSYVGDEAQS RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 68.5 bits (160), Expect = 5e-12
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
Frame = +1
Query: 229 QKDSYVGDEAQSXRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 402
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 403 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 570
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 751 FEQEM 765
F++ M
Sbjct: 216 FDESM 220
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 68.5 bits (160), Expect = 5e-12
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 6/185 (3%)
Frame = +1
Query: 229 QKDSYVGDEAQSXRGILTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 402
+K +V E + +L Y PIE G + NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 403 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHT 570
+ A + ++I+F+ F ++ + L S + +V+DSG +
Sbjct: 98 DNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTV 157
Query: 571 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALX 750
G + +++R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+
Sbjct: 158 ASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQN 215
Query: 751 FEQEM 765
F++ M
Sbjct: 216 FDESM 220
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 59.3 bits (137), Expect = 3e-09
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +1
Query: 361 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 540
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 541 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 711
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 712 RDIKEKLCYVALXFEQE 762
R E+ YV +++E
Sbjct: 385 RFALEQTTYVPEDYQKE 401
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 560 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 465
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 112 STMAPACARPVSPATTRPAPSSRP 183
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 705 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 571
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 259 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 125
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 259 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 125
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.90
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 310 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNSPAMYV 486
+ + D + K W T + L + + + PL+ K+ K T I + ET + +
Sbjct: 203 LNHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVET 261
Query: 487 AIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 579
AI A L LY+ G+ +D GD + VPI
Sbjct: 262 AIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 259 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 125
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -1
Query: 259 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 125
GP P S P +P +P G P G +GAS+P +P P
Sbjct: 105 GPPGPGGSPGKPGKPGKP---GAPGAPGNPGKGASAPCEPVTQPP 146
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -1
Query: 259 GPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 146
GPR P P +P P G P G+ +RG P+
Sbjct: 170 GPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPS 207
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 567 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 746
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 747 RXRAG 761
+ AG
Sbjct: 130 QTDAG 134
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -1
Query: 277 GYLXCSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMP 125
G C P P P +P P G P G + +GA++P +P+ P
Sbjct: 112 GCTGCCNPGPPGPG-GRPGKPGTPGKPGAPGNPGASGKGAAAPCEPSTPPP 161
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 7 ADDSQSRCRRVNTSRPQHKHTQSSRCATT-MLLRL*STMAPACARPVS 147
AD RC+ SR H S ATT L ST+AP C VS
Sbjct: 2444 ADSYDLRCQYPIGSRAVESHVNVSELATTSTLTEKNSTLAPICRLSVS 2491
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 103 RL*STMAPACARPVSPATTRPAPSSRPSWVALATR 207
RL S +AP A P S A TR APS + VA R
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRR 265
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +3
Query: 195 PRHQGRDGRYGPERL--LRG*RGPEQXRYPHSEVPHRARYHH 314
PR G GR+GP G GP + P R +HH
Sbjct: 376 PRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 135 KAGFAGDDAPRAVFPSIVGRPRHQG 209
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 262 SGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPA 146
+GP P P +P P G P G+ +RG P+
Sbjct: 176 AGPTGPTGDAGAPGQPGHPGSPGNPGRGGQRSRGLPGPS 214
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,280,721
Number of Sequences: 27780
Number of extensions: 348118
Number of successful extensions: 1511
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1495
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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