Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J20
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58286-2|CAB58350.1|   39|Drosophila melanogaster gdl-ORF39 prot...    30   3.5  
AE014296-2513|AAO41249.1|   39|Drosophila melanogaster CG33755-P...    30   3.5  
X83111-1|CAA58175.1|  859|Drosophila melanogaster Inscuteable pr...    30   4.6  
U73489-1|AAB18232.1|  767|Drosophila melanogaster Nem protein.         30   4.6  
AE013599-3072|AAF46626.1|  859|Drosophila melanogaster CG11312-P...    30   4.6  

>X58286-2|CAB58350.1|   39|Drosophila melanogaster gdl-ORF39
           protein.
          Length = 39

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 735 LIFISLLALDXGXLSRACSCGPETSTKC 818
           LI ++LL L    L+ +CSCG E   +C
Sbjct: 6   LIVVTLLLLQFAALALSCSCGEEAKLEC 33


>AE014296-2513|AAO41249.1|   39|Drosophila melanogaster CG33755-PA,
           isoform A protein.
          Length = 39

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 735 LIFISLLALDXGXLSRACSCGPETSTKC 818
           LI ++LL L    L+ +CSCG E   +C
Sbjct: 6   LIVVTLLLLQFAALALSCSCGEEAKLEC 33


>X83111-1|CAA58175.1|  859|Drosophila melanogaster Inscuteable
           protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 333 VCANSSHRQNKM--ASSYFFKLKHLVLRLIRTLAHKTCIYLIFIY 461
           +CA + +  ++M   S Y       + RLI TL H+TC   +F+Y
Sbjct: 631 LCAAALNNLSRMEATSHYSIMSNEAIFRLIDTLEHQTCGTSVFLY 675


>U73489-1|AAB18232.1|  767|Drosophila melanogaster Nem protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 333 VCANSSHRQNKM--ASSYFFKLKHLVLRLIRTLAHKTCIYLIFIY 461
           +CA + +  ++M   S Y       + RLI TL H+TC   +F+Y
Sbjct: 632 LCAAALNNLSRMEATSHYSIMSNEAIFRLIDTLEHQTCGTSVFLY 676


>AE013599-3072|AAF46626.1|  859|Drosophila melanogaster CG11312-PA
           protein.
          Length = 859

 Score = 29.9 bits (64), Expect = 4.6
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +3

Query: 333 VCANSSHRQNKM--ASSYFFKLKHLVLRLIRTLAHKTCIYLIFIY 461
           +CA + +  ++M   S Y       + RLI TL H+TC   +F+Y
Sbjct: 631 LCAAALNNLSRMEATSHYSIMSNEAIFRLIDTLEHQTCGTSVFLY 675


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,016,402
Number of Sequences: 53049
Number of extensions: 586581
Number of successful extensions: 878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)