Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J19
(872 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 292 7e-78
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 213 5e-54
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 210 5e-53
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 205 1e-51
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 202 1e-50
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 198 1e-49
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 187 3e-46
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 186 5e-46
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 185 1e-45
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 184 3e-45
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 183 6e-45
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 181 2e-44
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 177 4e-43
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 172 1e-41
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 169 6e-41
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 168 2e-40
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 165 1e-39
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 165 1e-39
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 165 1e-39
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 159 9e-38
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 152 1e-35
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 149 9e-35
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 146 5e-34
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 144 3e-33
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 141 2e-32
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 138 2e-31
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 138 2e-31
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 132 1e-29
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 131 3e-29
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 128 1e-28
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 123 7e-27
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 120 4e-26
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 116 1e-24
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 113 4e-24
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 113 7e-24
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 112 1e-23
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 109 7e-23
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 108 2e-22
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 107 5e-22
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 107 5e-22
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 107 5e-22
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 105 1e-21
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 105 1e-21
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 105 1e-21
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 105 2e-21
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 102 1e-20
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 102 1e-20
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 101 2e-20
UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 101 3e-20
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 101 3e-20
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 100 4e-20
UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;... 99 7e-20
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 100 1e-19
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 99 1e-19
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 99 2e-19
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 98 2e-19
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 98 3e-19
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 98 3e-19
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 98 3e-19
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 97 4e-19
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 97 5e-19
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 97 7e-19
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 96 9e-19
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 96 9e-19
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 96 1e-18
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 94 4e-18
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 93 6e-18
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 93 6e-18
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 93 8e-18
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 93 1e-17
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 93 1e-17
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 91 3e-17
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 91 3e-17
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 91 4e-17
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 91 4e-17
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 90 6e-17
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 90 6e-17
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 89 1e-16
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 89 1e-16
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 89 2e-16
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 89 2e-16
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 88 2e-16
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 87 4e-16
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 87 7e-16
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 87 7e-16
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 86 1e-15
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 86 1e-15
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 86 1e-15
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 86 1e-15
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 86 1e-15
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 85 2e-15
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 2e-15
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 85 2e-15
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 83 7e-15
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 83 7e-15
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 83 1e-14
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 82 2e-14
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 82 2e-14
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 81 3e-14
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 3e-14
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 4e-14
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 6e-14
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 80 8e-14
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 1e-13
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 1e-13
UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 79 2e-13
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 78 3e-13
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 78 3e-13
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 78 3e-13
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 6e-13
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 6e-13
UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4... 77 8e-13
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 8e-13
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 76 1e-12
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 75 2e-12
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 75 3e-12
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 75 3e-12
UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n... 74 4e-12
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 74 4e-12
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 73 7e-12
UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 72 2e-11
UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 72 2e-11
UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma j... 71 3e-11
UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 70 7e-11
UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 70 7e-11
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 69 2e-10
UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobact... 69 2e-10
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 69 2e-10
UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 68 4e-10
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 68 4e-10
UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n... 67 6e-10
UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n... 67 6e-10
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 66 8e-10
UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1; Met... 66 1e-09
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 65 3e-09
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 64 3e-09
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 64 4e-09
UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 61 4e-08
UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gam... 60 5e-08
UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 58 2e-07
UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 58 3e-07
UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 54 5e-06
UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 54 5e-06
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 54 6e-06
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 53 1e-05
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 53 1e-05
UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2; Actinomycetale... 52 2e-05
UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=... 45 0.002
UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F; ... 43 0.009
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 43 0.009
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 42 0.020
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 41 0.036
UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4; Leptos... 41 0.047
UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1; Halo... 40 0.11
UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep: Hydro... 40 0.11
UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6; Halob... 40 0.11
UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n... 37 0.58
UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=... 36 1.3
UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole geno... 36 1.8
UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone morph... 34 4.1
UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase act... 34 4.1
UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella ve... 34 4.1
UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
UniRef50_A2DWG3 Cluster: Legume-like lectin family protein; n=2;... 33 9.5
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 292 bits (717), Expect = 7e-78
Identities = 138/244 (56%), Positives = 175/244 (71%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ T + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 213 bits (520), Expect = 5e-54
Identities = 102/199 (51%), Positives = 141/199 (70%)
Frame = +3
Query: 114 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALL 293
ML +R + L R ++R+ Q +R H + VHR+T +NPSIPFEFS N KR E ++
Sbjct: 1 MLRLIRPRLAALARPTTRAPQALNARTH-IVSVHRNTENNNPSIPFEFSPENMKRAEEVI 59
Query: 294 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 473
A YP +K+ A++PLLD+ QRQ G + IS M+ VA++L +P MRVYEVATFYTM+ R P
Sbjct: 60 AKYPPQYKKAAVMPLLDIGQRQLG-YTSISVMNYVAKLLEMPPMRVYEVATFYTMYNRTP 118
Query: 474 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 653
+G+YH+Q+CTTTPC L GSD I+ A++ N + G + F++SEVECLGACVNAPM+
Sbjct: 119 MGRYHLQICTTTPCQLCGSDGIMEAVQNTLNIKPGETTKDNLFTLSEVECLGACVNAPMM 178
Query: 654 QVNDDYYEDLSVXDTKEII 710
+NDDYYEDL+ T +++
Sbjct: 179 AINDDYYEDLTPEGTVKLL 197
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 210 bits (512), Expect = 5e-53
Identities = 100/179 (55%), Positives = 133/179 (74%), Gaps = 1/179 (0%)
Frame = +3
Query: 177 TTASRQHDSLF-VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 353
+T S+++ S+ VHRDT EDNP+I FEF+ N+KR E ++A YP +K+GA +PLLDL Q
Sbjct: 19 STVSKRYSSIISVHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQ 78
Query: 354 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 533
RQ G + IS M+ VA++L++P MRVYEVATFYTM+ R P+GKY++QVCTTTPC L GSD
Sbjct: 79 RQLG-FTSISVMNYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTPCQLCGSD 137
Query: 534 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
+I+ AI + G +P F++ EVECLGACVNAPMI +NDDY+EDLS T ++
Sbjct: 138 SIMKAITDYLKIKPGQTTPDKLFTLQEVECLGACVNAPMIAINDDYHEDLSPEATINLL 196
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 205 bits (501), Expect = 1e-51
Identities = 102/215 (47%), Positives = 137/215 (63%)
Frame = +3
Query: 174 QTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQ 353
Q+T +R D+L H +T ++N PF+F+Q N +VE +LA YP+ +++ A+IPLLDLAQ
Sbjct: 28 QSTLTRS-DALSRHVETEDNNEHTPFDFTQENLVKVEKILAKYPKQYRQSALIPLLDLAQ 86
Query: 354 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 533
RQ+GGW+ + AM KVA I + M YEVA+FYTMF R IG+ VQVCTTTPC LRGS
Sbjct: 87 RQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFVQVCTTTPCMLRGSG 146
Query: 534 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
I+ K +VG +P KF++ EVECLGACVNAPM+ +NDD+YEDL+ T ++
Sbjct: 147 EIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCINDDFYEDLTSASTINLLD 206
Query: 714 XXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGP 818
+ R A+ G T+L E P GP
Sbjct: 207 QIKNNKPTKIGPQTHRKAAEGPQGKTTLLEPPVGP 241
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 202 bits (492), Expect = 1e-50
Identities = 97/185 (52%), Positives = 128/185 (69%), Gaps = 2/185 (1%)
Frame = +3
Query: 165 RSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLD 344
R R DSL VHR+ P +NPSIPF F++ NQ+ ++ +L YP +K+ A++PLLD
Sbjct: 26 RPFSAGPQRCSDSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLD 85
Query: 345 LAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLR 524
L QRQ G + IS M++VA +L +P MRVYEVATFYTM+ R P+GKY VQ+CTTTPC L
Sbjct: 86 LGQRQHG-FTSISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPCQLG 144
Query: 525 --GSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDT 698
GS IL AI++ G + G F++ EVECLGACVNAPM+Q+NDDYYEDL+
Sbjct: 145 GCGSTKILEAIQEHLGITPGHTTEDGLFTLLEVECLGACVNAPMVQINDDYYEDLTPESM 204
Query: 699 KEIIS 713
K +++
Sbjct: 205 KTLLT 209
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 198 bits (484), Expect = 1e-49
Identities = 99/202 (49%), Positives = 128/202 (63%)
Frame = +3
Query: 228 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 407
E ++ FEFS+ NQ+RV+ALLA YP+ +GA++PLLD+AQRQ G WL ISA+ VAE
Sbjct: 27 EIRKALKFEFSKDNQRRVKALLAWYPQAEWKGALLPLLDIAQRQQG-WLSISAVQAVAET 85
Query: 408 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 587
+ + M +E A FYTMF +P GKY V VCT+TPC LRG D I A K+ N E G +
Sbjct: 86 IKIDPMEAFEAAQFYTMFFMKPRGKYVVSVCTSTPCKLRGGDEIFEACKKTLNLEHGQTT 145
Query: 588 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFA 767
P +F++ E C+GACVNAP++ VNDD YEDL I++ +GRFA
Sbjct: 146 PDMQFTLKEDYCMGACVNAPVLAVNDDMYEDLDEKSLANILADLRNDKLPPAGPRNGRFA 205
Query: 768 SXPLGGLTSLTEXPTGPGFGVQ 833
S P GGLT+L P PGF +Q
Sbjct: 206 SEPKGGLTTLKIQPPPPGFMMQ 227
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 187 bits (456), Expect = 3e-46
Identities = 82/157 (52%), Positives = 113/157 (71%)
Frame = +3
Query: 240 SIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLP 419
S F F + N E ++ YP KR A++PLLDLAQRQ+GGWLP+ A+ VA +L +P
Sbjct: 2 STNFTFDKKNLNLAEDIIKKYPPHGKRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMP 61
Query: 420 KMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK 599
MR YEVATFY+MF + +GKYH+QVCTTTPCWL GSD I+ +++ ++ + K
Sbjct: 62 YMRAYEVATFYSMFNLKRVGKYHIQVCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQK 121
Query: 600 FSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
F++SE+ECLGACVNAP++Q+NDDYYEDL+ +++I
Sbjct: 122 FTLSEIECLGACVNAPVVQINDDYYEDLTEEKMEKLI 158
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 186 bits (454), Expect = 5e-46
Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 11/219 (5%)
Frame = +3
Query: 201 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPI 380
+L H D+P++ P +P+EFS+ANQ +V+ +L+ YP +K+ A+IPLLDLAQ+Q+GGWLP+
Sbjct: 31 ALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLPV 90
Query: 381 SAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 560
SAM+ VA+++ + +RVYEVATFY+MF R +GKYH+ VC TTPC +RGS I +A+
Sbjct: 91 SAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLDH 150
Query: 561 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVXDTKEII 710
+ G + G FSV E+EC+G CVNAPMI V D +Y+ED++ EI+
Sbjct: 151 LGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEIV 210
Query: 711 SXXXXXXXXXXXXXS-GRFASXPLGGLTSLTEXPTGPGF 824
+ R P GG +L P P F
Sbjct: 211 EKLRKGEKPPHGTQNPKRIKCGPEGGNKTLLGEPKPPQF 249
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 185 bits (450), Expect = 1e-45
Identities = 81/155 (52%), Positives = 112/155 (72%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F FS+ N + V +LA YP KR A++PLL L QRQ W+PI+AM VA++L LP ++
Sbjct: 24 FCFSEENSREVARILAKYPASRKRSAVLPLLHLVQRQHENWIPIAAMDHVAQLLGLPVIK 83
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
VYEVA+FY+MF P+GK+ ++VC TTPCWLRGSD ++ A K+E +VG + KFS+
Sbjct: 84 VYEVASFYSMFNTAPVGKHTIRVCRTTPCWLRGSDCLIEAAKRELGIKVGHKTEDNKFSL 143
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
EVECLGACV+AP++Q+NDDY+E+L E++S
Sbjct: 144 DEVECLGACVSAPVVQINDDYFENLDERSFLELLS 178
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 184 bits (448), Expect = 3e-45
Identities = 89/194 (45%), Positives = 125/194 (64%), Gaps = 6/194 (3%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG-----GWLPISAMHKVAEILN 413
F F +++R+E +LA YP + A++PLLDLAQRQ G W+P +AM ++A L
Sbjct: 20 FSFDVQSEQRIEIILAKYPPARRASAVMPLLDLAQRQMGRETGSAWIPRAAMDEIARRLG 79
Query: 414 LPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCE-VGGNSP 590
+ +RVYEVATFY M+ RP+G++H+Q+CTTTPCWLRGSD ++ A + T + G S
Sbjct: 80 MAPIRVYEVATFYFMYNTRPVGRHHLQLCTTTPCWLRGSDEVVAACRSATGIQGWGETSE 139
Query: 591 CGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFAS 770
G F+++EVECLGACVNAP++QV+DDYYED+ T ++ SGR S
Sbjct: 140 DGMFTMTEVECLGACVNAPILQVDDDYYEDMDGPRTLVLLEALRRGERPTPGSMSGRQNS 199
Query: 771 XPLGGLTSLTEXPT 812
P GG T+L + P+
Sbjct: 200 APEGGPTTLRDVPS 213
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 183 bits (445), Expect = 6e-45
Identities = 87/186 (46%), Positives = 125/186 (67%), Gaps = 10/186 (5%)
Frame = +3
Query: 183 ASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQS 362
A+ D +H+DTPE+N + FEFS+A K V ++A YP +K+ A+IP+LD+ Q+++
Sbjct: 41 ATNSTDIFNIHKDTPENNAATSFEFSEATLKVVNDIIARYPPNYKQSAIIPVLDVTQQEN 100
Query: 363 GGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAIL 542
GGWL ++AM++VA++L++ +RVYEVATFYTMF R IGKYHVQ+C TTPC L+GS I
Sbjct: 101 GGWLSLAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHVQICGTTPCRLQGSQKIE 160
Query: 543 NAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVX 692
AI + +G + G F++ E+EC+GACVNAPM+ + D YYEDL+
Sbjct: 161 EAITKHLGIGIGQTTQDGLFTLGEMECMGACVNAPMVAIADYTKGVSGFEYIYYEDLTPK 220
Query: 693 DTKEII 710
D I+
Sbjct: 221 DIVNIL 226
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 181 bits (440), Expect = 2e-44
Identities = 83/181 (45%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
Frame = +3
Query: 174 QTTASRQHDSLFV-HRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLA 350
Q + ++ ++FV HR+ +++ S+PF+F+ N K++EA+LA +P K+ IPLL LA
Sbjct: 10 QRKSIQRFSNIFVAHRNRDDNSDSVPFDFTDENYKKIEAILAKFPSNEKKSGTIPLLMLA 69
Query: 351 QRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGS 530
Q+Q+ +L +SAM K+A+IL +P+M VYE A+FY+MF R +GK+H+QVC TTPC L GS
Sbjct: 70 QKQNNNFLSLSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQVCGTTPCQLCGS 129
Query: 531 DAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY-YEDLSVXDTKEI 707
I+ I+Q+ N + G + G +++ EVECLGAC NAPM+QVN+++ YEDL+ +T ++
Sbjct: 130 KDIIKTIEQKLNIKNGETTADGLYTLQEVECLGACANAPMMQVNNEWVYEDLTPENTLKL 189
Query: 708 I 710
+
Sbjct: 190 L 190
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 177 bits (430), Expect = 4e-43
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 10/213 (4%)
Frame = +3
Query: 210 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 389
VHRD PEDN ++ + F + + +V+A+L YP +KR AMIPLLDLAQ+Q+ G L ++ M
Sbjct: 26 VHRDVPEDNSTMTWTFEASVRPKVDAILRRYPSNYKRSAMIPLLDLAQQQNKGHLTLAMM 85
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ +A++L + +RVYEVATFY+MF R+ +GK HV VC TTPC LRGS I A+++
Sbjct: 86 NHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHVMVCGTTPCMLRGSREIEKALEEWMGV 145
Query: 570 EVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVXDTKEIISXX 719
+ + CG F++ E+EC+G CVNAPMI V D +YYEDL+ T +
Sbjct: 146 KKFETTACGTFTLGEMECMGCCVNAPMIAVADYRNGVEGYSYNYYEDLT-PQTAVKVCEA 204
Query: 720 XXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGP 818
R + P+ GLT+LT P+GP
Sbjct: 205 LKAGKSPRVGSQIRDKAEPIKGLTTLTGDPSGP 237
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 172 bits (418), Expect = 1e-41
Identities = 88/192 (45%), Positives = 117/192 (60%), Gaps = 7/192 (3%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG------GWLPISAMHKVAEIL 410
F ++ N ++ +A++A YP G +R A++PLLDLAQRQ G GWLP+ + VA L
Sbjct: 20 FAWTAENAEKAKAVIARYPAGRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQL 79
Query: 411 NLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSP 590
++P +R YEVATFYTM+ P+G+YHVQVC TTPC LRGSD + A K + G +P
Sbjct: 80 DMPFIRAYEVATFYTMYNLAPVGRYHVQVCGTTPCLLRGSDDVTAACKNRGMVK-GKTTP 138
Query: 591 CGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXS-GRFA 767
G F++SEVEC+G C NAPM+Q+NDD YEDL I+ + R
Sbjct: 139 DGLFTLSEVECMGTCANAPMVQINDDNYEDLDYDSMTRILDELAAGKQPKTGTQNPRRHT 198
Query: 768 SXPLGGLTSLTE 803
S P GG T+L E
Sbjct: 199 SEPEGGPTTLKE 210
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 169 bits (412), Expect = 6e-41
Identities = 80/156 (51%), Positives = 107/156 (68%), Gaps = 2/156 (1%)
Frame = +3
Query: 252 EFSQANQKRVEALLAI--YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKM 425
EFS +N+ V A I YP G + A++ +LDLAQ Q+ WL S + VA +L +P +
Sbjct: 8 EFSFSNETLVIAKKIINNYPAGKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYI 67
Query: 426 RVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 605
+VYE+A+FYTMF +P+GKYH+Q+C TTPCWLRGSD I+N K+ E G S F+
Sbjct: 68 KVYEIASFYTMFNLQPVGKYHIQICGTTPCWLRGSDDIMNFCKKLLKIETGKTSQDKLFT 127
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
VSE ECLGAC NAP++Q+N DYYE+L+ KEII+
Sbjct: 128 VSETECLGACRNAPVVQINHDYYENLTNDKIKEIIN 163
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 168 bits (408), Expect = 2e-40
Identities = 85/196 (43%), Positives = 113/196 (57%)
Frame = +3
Query: 216 RDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHK 395
R P + F F+ N + EA +A YPEG + A+IPLL AQ Q+GGWLP A+
Sbjct: 5 RLAPAEQQPAAFAFTPENARWAEAQIAKYPEGRQASAVIPLLWRAQEQNGGWLPQKAIEA 64
Query: 396 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 575
VA+ L +P +RV EVATFYTMF P+G+Y +QVC T PC + G+ + + +
Sbjct: 65 VADELGMPHIRVLEVATFYTMFALEPVGRYWIQVCGTVPCDVCGAKELKHYLHDRLG-PA 123
Query: 576 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXS 755
G SP G FS EVECLGAC NAPM+Q+N DYYEDL+ ++ +
Sbjct: 124 GHVSPDGNFSWLEVECLGACCNAPMVQINQDYYEDLTPEILGRLMDDLAAGRPVKAGSQA 183
Query: 756 GRFASXPLGGLTSLTE 803
GR +S P G T+LT+
Sbjct: 184 GRTSSEPKGAATTLTD 199
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 165 bits (401), Expect = 1e-39
Identities = 75/154 (48%), Positives = 105/154 (68%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F+F++ + K+ L YP K A++PLL +AQ+Q GG +PI+AM+ +A+ L++ +
Sbjct: 18 FKFNKESLKQANDALNRYPSDRKSSAVMPLLHIAQKQCGGLIPIAAMNYIADFLDMKPIH 77
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
VYEVA FY+M+ GKY VQVC TTPCWL GSD +L A K+ N +VG + F++
Sbjct: 78 VYEVAKFYSMYNLSVTGKYLVQVCRTTPCWLCGSDNVLKACKEFLNIDVGNTTDDNLFTL 137
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
EVECLGACVNAP++Q+NDDYYE L+ K I+
Sbjct: 138 KEVECLGACVNAPVVQINDDYYEKLNADKIKNIL 171
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 165 bits (401), Expect = 1e-39
Identities = 76/162 (46%), Positives = 111/162 (68%), Gaps = 1/162 (0%)
Frame = +3
Query: 204 LFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 383
L H +TPE+N FEF+ N K + +LL YP+ +K+ A++ LL LAQ+Q+G +L ++
Sbjct: 26 LVTHHETPENNDDTYFEFTPENYKIINSLLKRYPDNYKKSAVLYLLHLAQKQNGNFLTLA 85
Query: 384 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 563
AM+KVA+IL + + VYEVA FY+MF R +GK +Q+C TTPC L G+ I+ A +
Sbjct: 86 AMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRLQICGTTPCLLCGARDIMKACEDHL 145
Query: 564 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD-YYEDLS 686
++GG + G F++ EVECLG C NAPM+QVN++ YEDL+
Sbjct: 146 GIKMGGTTKDGMFTLEEVECLGVCANAPMMQVNNEKVYEDLT 187
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 165 bits (401), Expect = 1e-39
Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVE-ALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 389
H++T DN IP++F+ ++ +++ +L +P G + A IPLL LAQ+Q GG++P++AM
Sbjct: 40 HQNTDYDNTRIPWDFTTSSYEKIHNEILPKFPRGRRISATIPLLHLAQQQQGGYIPVTAM 99
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+K+A+I +P M V+E TFY+MF R P+GKYH+Q C TTPC L G+D ++ N
Sbjct: 100 YKIAKICEVPPMHVFETVTFYSMFNRHPVGKYHIQFCRTTPCMLCGADELMERTMHYLNV 159
Query: 570 EVGGNSPCGKFSVSEVECLGACVNAPMIQVND---------DYYEDLSVXDTKEII-SXX 719
+ G + G ++ E+ECLGACVNAPM+ V+D DY EDL+ K ++ +
Sbjct: 160 RMHGTTSDGLITIGEMECLGACVNAPMLVVSDYSNPPNFSYDYMEDLTWESIKTLVENLR 219
Query: 720 XXXXXXXXXXXSGRFASXPLGGLTSLT-EXPTGP 818
R + P GG TSL + P GP
Sbjct: 220 GGKPFKIGSQRLDRRYAEPAGGRTSLLFKEPPGP 253
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 159 bits (386), Expect = 9e-38
Identities = 87/203 (42%), Positives = 117/203 (57%), Gaps = 1/203 (0%)
Frame = +3
Query: 210 VHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAM 389
+H+D PE F F+ NQK EA + YPEG + A+IPLL AQ Q G WL A+
Sbjct: 5 LHKDQPES-----FAFTPENQKWAEAQMTKYPEGRQASAIIPLLWRAQEQEG-WLTRPAI 58
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAILNAIKQETN 566
+A +L++ +R EVATFY MF P+G HVQ+C TT C + G++ ++ ++
Sbjct: 59 EHIAAMLDMAYIRALEVATFYFMFQLAPVGSVAHVQICGTTSCMICGAEDLIAVCQEMIA 118
Query: 567 CEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXX 746
+ S GKFS EVECLGAC NAPM Q+ DYYEDL+ +EI+
Sbjct: 119 PKAHEVSADGKFSWEEVECLGACANAPMAQIGKDYYEDLTAERLREILGELAEGKVPVPG 178
Query: 747 XXSGRFASXPLGGLTSLTEXPTG 815
+GR+A+ PL GLTSLTE +G
Sbjct: 179 PQNGRYAAEPLKGLTSLTEYDSG 201
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 152 bits (368), Expect = 1e-35
Identities = 79/185 (42%), Positives = 104/185 (56%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F F+ N +A YPEG + A+IPLL AQ Q+GGWLP A+ VA+ L +P +R
Sbjct: 16 FAFTPENADWARGQIAKYPEGRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIR 75
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
V EVATFYTMF P+G++ +QVC T PC G+ L A E G + G FS
Sbjct: 76 VLEVATFYTMFALEPVGRFWIQVCGTVPCDCCGAKE-LKASLHERLGPSGKVTADGNFSW 134
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGL 788
EVECLGAC NAPM+Q+N DYYEDL+ +++ GR +S P +
Sbjct: 135 LEVECLGACCNAPMVQINQDYYEDLTPESLNKLMDDLAAGRPVKVGSQIGRVSSEPKDAV 194
Query: 789 TSLTE 803
+LT+
Sbjct: 195 NTLTD 199
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 149 bits (361), Expect = 9e-35
Identities = 78/198 (39%), Positives = 111/198 (56%), Gaps = 1/198 (0%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
FEF+ AN + A + YPEG ++ A+IP+L AQ Q G WL A+ A++L +P +R
Sbjct: 13 FEFTPANLEWARAQMTKYPEGRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIR 71
Query: 429 VYEVATFYTMFIRRPIGKY-HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 605
EVATFY MF +P+G H+Q+C TT C + G++ ++ K++ E S G+FS
Sbjct: 72 ALEVATFYFMFQLQPVGSVAHIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFS 131
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGG 785
EVECLGAC NAPM Q+ D+YEDL+V +I +GRF++ LGG
Sbjct: 132 WEEVECLGACTNAPMAQIGKDFYEDLTVEKLAALIDRFAAGEVPVPGPQNGRFSAEALGG 191
Query: 786 LTSLTEXPTGPGFGVQXA 839
T+L + G A
Sbjct: 192 PTALADLKGGEAHNASVA 209
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 146 bits (355), Expect = 5e-34
Identities = 79/188 (42%), Positives = 109/188 (57%), Gaps = 3/188 (1%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F F+ N+ +A YPEG ++ A+IPLL AQ Q G W+ +++ VA +LN+P +R
Sbjct: 16 FAFNAENEAWAHKTIAKYPEGRQQSAVIPLLMRAQEQEG-WVTKASIEYVAAMLNMPLIR 74
Query: 429 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 605
V EVATFYT F +P+G + H+QVC TTPC LRGS+A+++ + + + + + G S
Sbjct: 75 VLEVATFYTQFQLKPVGSRAHIQVCGTTPCMLRGSEALMDVCRHKIHHDPFELNADGTLS 134
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXX--XXXSGRFASXPL 779
EVEC GAC NAPM+ + D YEDL+ EII GR S P
Sbjct: 135 WEEVECQGACANAPMVMIFKDAYEDLTPERLAEIIDAFEAGKGDTIKPGPQDGRVTSEPA 194
Query: 780 GGLTSLTE 803
GLT+LTE
Sbjct: 195 SGLTALTE 202
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 144 bits (349), Expect = 3e-33
Identities = 74/188 (39%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Frame = +3
Query: 243 IPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 422
+ F F++AN + + YP+G ++ A+IPLL LAQ Q G W+ +A+ ++++L +P+
Sbjct: 14 VSFAFNRANAAAAKQWIKKYPKGREQSAIIPLLMLAQEQEG-WVTKAAIETISDMLGMPR 72
Query: 423 MRVYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK 599
+R EVATFYT + P+G + H+QVC TTPC LRGS+A+++ + + + + + G
Sbjct: 73 IRGLEVATFYTQYQLNPVGTRAHIQVCGTTPCMLRGSEALMDVCRSKIHHDQFHTNDKGT 132
Query: 600 FSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXX--XXSGRFASX 773
S EVECLGACVNAPM+ + D +EDL+ EII +GR S
Sbjct: 133 LSWEEVECLGACVNAPMVMIFKDTFEDLTPERLAEIIDLYDAGKGASVAPGPQNGRTGSE 192
Query: 774 PLGGLTSL 797
P GLT+L
Sbjct: 193 PASGLTTL 200
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 141 bits (342), Expect = 2e-32
Identities = 79/186 (42%), Positives = 108/186 (58%), Gaps = 3/186 (1%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F FS+ N EA + YPEG ++ A+IPLL AQ Q G W+ +A+ VA++L + +R
Sbjct: 16 FAFSKENAAWAEATIKKYPEGREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIR 74
Query: 429 VYEVATFYTMFIRRPIG-KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS 605
V EVATFYT F +P+G + HVQVC TTPC LRG++ ++ K++ E + G S
Sbjct: 75 VLEVATFYTQFQLQPVGTRAHVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLS 134
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXS--GRFASXPL 779
EVEC GACVNAPM+ + D +EDL+ +EII R S P+
Sbjct: 135 WEEVECQGACVNAPMVMIFKDTFEDLTPERLEEIIDRFEAGKGSEVVPGPQIDRVYSAPI 194
Query: 780 GGLTSL 797
GGLT+L
Sbjct: 195 GGLTTL 200
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 138 bits (334), Expect = 2e-31
Identities = 77/182 (42%), Positives = 107/182 (58%), Gaps = 6/182 (3%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F F++ ++ +V+ LA YPE K A+IPLL +AQ+Q W+ AM ++A +P +R
Sbjct: 14 FAFNEKSEAKVKFWLAKYPEERKASAVIPLLWIAQKQDN-WVSEPAMREIAARCGMPYIR 72
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGN--SPCGKF 602
VYEVATFYTMF GK+ +QVC TTPCWLRG+D L A+ ++ + G S G
Sbjct: 73 VYEVATFYTMFNLEQTGKHLIQVCGTTPCWLRGADD-LKAVCEKKIGKKGREHVSSDGML 131
Query: 603 SVSEVECLGACVNAPMIQVN----DDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFAS 770
+ EVECLGAC NAPM+Q++ D YYEDL+ ++++ SGR S
Sbjct: 132 AWEEVECLGACANAPMVQISNTEGDLYYEDLTAEALEQMLDDLRAGKEVKAGPISGRSCS 191
Query: 771 XP 776
P
Sbjct: 192 EP 193
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 138 bits (333), Expect = 2e-31
Identities = 59/154 (38%), Positives = 99/154 (64%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F+FS+A+ K+++ + A YPEG ++ A++P+L +AQ + GGWLP M VA +L++ +
Sbjct: 8 FQFSEASLKKIQEMKARYPEGRQKSALLPVLHMAQDELGGWLPAPLMDYVASLLDITPIE 67
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
VYEVA+FY+M+ +P+GK + C T PC L G + ++ + + ++ S G+F++
Sbjct: 68 VYEVASFYSMYNLKPVGKCMFEFCQTGPCCLNGVEELIEYTEDKLGIKLNQTSADGRFTI 127
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
VEC+G+C APM Q+ YYE+L+ +II
Sbjct: 128 KAVECMGSCGTAPMAQIGTYYYENLTKEKIDKII 161
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 132 bits (319), Expect = 1e-29
Identities = 58/139 (41%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
K ++ LA YP KR A++P L Q+Q+ GWL +AM+ +A+ L LP++ VYEVATFY
Sbjct: 16 KEIDRWLAKYPTDQKRSAVVPALLFVQKQNNGWLSKAAMNALADYLQLPRIWVYEVATFY 75
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
M+ +P+GK+ + +C PC+LRGSD I+ +K+ + + G F++ VEC+ A
Sbjct: 76 DMYNLKPMGKHKISICQNVPCFLRGSDEIVACVKERLGIDFDETTSDGLFTLKSVECMAA 135
Query: 633 CVNAPMIQVND-DYYEDLS 686
C APM Q++D +Y+E+L+
Sbjct: 136 CGGAPMCQIDDQEYHENLT 154
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 131 bits (316), Expect = 3e-29
Identities = 64/154 (41%), Positives = 100/154 (64%), Gaps = 1/154 (0%)
Frame = +3
Query: 252 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 431
+F ++Q +V+A+LA YP+ +KR A IPLL L QR++GG+L + +++I+ + RV
Sbjct: 24 DFKFSDQSKVDAILAKYPKENKRAATIPLLHLGQRENGGYLTTGVLQAISKIVGVTAGRV 83
Query: 432 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV-GGNSPCGKFSV 608
+E A FY+MF +P + V+VC C+L GSD + AI++ T G SP G+F++
Sbjct: 84 HETACFYSMFRFQPPNNHIVEVCKGLSCYLTGSDNVKEAIQKATGGTFKEGKSPDGQFTL 143
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
EVECLGAC NAP++ ++ YY++L+ K II
Sbjct: 144 EEVECLGACANAPVMILDGVYYQNLTAETAKIII 177
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 128 bits (310), Expect = 1e-28
Identities = 62/152 (40%), Positives = 92/152 (60%)
Frame = +3
Query: 258 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 437
++A R+E L + YPE ++ A++P+L Q WL I KVAEIL++ + VYE
Sbjct: 13 TEALMTRIEELCSHYPEDKRKSALLPVLHEVQDAHENWLSIELQDKVAEILHIKPVEVYE 72
Query: 438 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 617
V +FYTM+ RRPIGKY + C T+PC L G++ +++ + +VG + G F V V
Sbjct: 73 VVSFYTMYNRRPIGKYMFEFCQTSPCCLNGTENLMDYTCDKLGVKVGEPTADGLFEVRGV 132
Query: 618 ECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
ECLGAC APM+Q+ D Y E L+ ++I+
Sbjct: 133 ECLGACDYAPMMQLGDFYQEHLTEAKIDQLIA 164
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 123 bits (296), Expect = 7e-27
Identities = 59/138 (42%), Positives = 92/138 (66%)
Frame = +3
Query: 270 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 449
++ +EA A YP+ +R A++P L +AQ++ G LP + +VA+IL + ++ VYE+ATF
Sbjct: 4 REEIEAAAARYPD--RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATF 60
Query: 450 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 629
YT+F PIG++H+Q+C C L GS+A+L ++ G +P G F++S VECLG
Sbjct: 61 YTLFHTEPIGRFHLQLCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLG 120
Query: 630 ACVNAPMIQVNDDYYEDL 683
AC AP++QV DDY+ +L
Sbjct: 121 ACEMAPVMQVGDDYHGNL 138
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 120 bits (290), Expect = 4e-26
Identities = 58/146 (39%), Positives = 92/146 (63%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
F+ S + V++ LA Y K A+IP L +AQ+++ G++ + +++++++P+ R
Sbjct: 4 FKLSDSGLAAVKSELARYEA--KESAIIPSLYIAQKENNGFITPEIIRTLSQVMDIPEAR 61
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
+ EV FYTMF ++P+GKYHVQVCT C L G + I E + + G+F+V
Sbjct: 62 INEVFKFYTMFNQKPVGKYHVQVCTNISCALEGGREMAKHICHELGVKFDQVTADGRFTV 121
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLS 686
S+VECLG+C APM+QVND Y+E L+
Sbjct: 122 SKVECLGSCGTAPMMQVNDSYHEKLT 147
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 116 bits (278), Expect = 1e-24
Identities = 55/137 (40%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 458
+ LL YPE K+ A++P L LAQ+++ L + VAE++++P + Y +AT+Y+M
Sbjct: 10 IHRLLGRYPE--KQSALMPALMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSM 67
Query: 459 F-IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGAC 635
+ + +P+G+YH+QV T P L G+ IL+ +++ N G +P G F++SEVECL +C
Sbjct: 68 YNVEKPVGRYHLQVDTNIPATLMGAGEILDHLEKTLNIRAGETTPDGLFTLSEVECLASC 127
Query: 636 VNAPMIQVNDDYYEDLS 686
P+IQVND YYE+++
Sbjct: 128 GTCPVIQVNDVYYENMT 144
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 113 bits (273), Expect = 4e-24
Identities = 51/147 (34%), Positives = 88/147 (59%)
Frame = +3
Query: 270 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 449
+K+++A +A YP+ K A++ L + Q ++ L + VA+ L++P + V EVATF
Sbjct: 7 KKQIDAWIAKYPKDRKSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVATF 66
Query: 450 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 629
Y + + +GKY ++ C C L G+D ++ ++ + + +P G SV +VECLG
Sbjct: 67 YENYNHKKVGKYVIRFCHNISCMLNGADDLIAYLENKLGVQTDEVTPDGLISVKKVECLG 126
Query: 630 ACVNAPMIQVNDDYYEDLSVXDTKEII 710
ACV APM Q+ND+Y+E+L+ +I+
Sbjct: 127 ACVGAPMFQINDEYFENLTFDKIDKIV 153
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 113 bits (271), Expect = 7e-24
Identities = 54/142 (38%), Positives = 91/142 (64%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 458
+EA++A YP HK A++PLL +AQ + G +L +AM +VAE+L++P V+EVA FY++
Sbjct: 11 IEAIIARYP--HKPSAVLPLLFIAQDEYG-YLTEAAMREVAELLDMPPTDVFEVAGFYSL 67
Query: 459 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACV 638
+P+GK+ +QVC PC G++ ++ ++ + V +P G F++ V+CL C
Sbjct: 68 LYEQPVGKWVLQVCDDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRVKCLADCD 127
Query: 639 NAPMIQVNDDYYEDLSVXDTKE 704
+AP++Q N +YY DL+ + E
Sbjct: 128 HAPVLQANLEYYHDLTTPEKVE 149
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 112 bits (270), Expect = 1e-23
Identities = 51/145 (35%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 458
++ LA +P KR A++ L AQ Q+ GWL + VA+ L++P + YEVATFY+M
Sbjct: 27 IDHWLAKFPADQKRSALLQGLYAAQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSM 86
Query: 459 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK-FSVSEVECLGAC 635
F R +G+++V CT CWL G++ +++ +++ C++G ++ G+ + E ECL AC
Sbjct: 87 FETRKVGRHNVAFCTNVSCWLNGAEDLVSYAEEKLGCKLGQSTADGRVYLKCEEECLAAC 146
Query: 636 VNAPMIQVNDDYYEDLSVXDTKEII 710
APM+ +N Y+E L+ +++
Sbjct: 147 AGAPMMVINGHYHERLTKEKVDQLL 171
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 109 bits (263), Expect = 7e-23
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Frame = +3
Query: 315 KRGAMIPLLDLAQ-RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
+R ++ LL Q ++P +AE LN+P +VYEV TFYTMF +P GKY +
Sbjct: 20 ERDMLVYLLHRVQDHYQSHYIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYII 79
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 671
+VCT+ PC + G I+ +KQ+ + G + G F++ E CLG C +P+I VND Y
Sbjct: 80 RVCTSLPCHVPGGREIVQFLKQKLGVDFGETTKDGLFTLEETGCLGLCGVSPVIMVNDQY 139
Query: 672 YEDLSVXDTKEII 710
Y DL+V EII
Sbjct: 140 YGDLTVEKVNEII 152
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 108 bits (260), Expect = 2e-22
Identities = 55/144 (38%), Positives = 87/144 (60%)
Frame = +3
Query: 255 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 434
FS+A + L+ YP + A++P+L +AQ + G+L + VA++L L M+V
Sbjct: 12 FSEARLAEIAELVKRYPGA--QSALMPVLYMAQ-EDFGYLSMDVQQHVADVLGLRLMQVR 68
Query: 435 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 614
EV TFYTMF +P G Y ++VCT C L G++ ++ + + +VG + G F+V+E
Sbjct: 69 EVVTFYTMFREKPCGTYLLEVCTNAGCMLNGANELVAHMCETLGIKVGETTDDGLFTVAE 128
Query: 615 VECLGACVNAPMIQVNDDYYEDLS 686
VEC GAC AP++QVN Y+E ++
Sbjct: 129 VECAGACGGAPVVQVNHTYHEKVT 152
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 107 bits (256), Expect = 5e-22
Identities = 52/133 (39%), Positives = 87/133 (65%)
Frame = +3
Query: 288 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 467
++ YP +R A++P L LAQ + G+L +A +AEIL++P++ V+E+A+FYT++
Sbjct: 21 IVKCYPT--QRSAIMPALYLAQ-DTYGFLDETAYRAIAEILDIPEIWVFELASFYTLYKN 77
Query: 468 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
+ IGKY++Q+CT PC LRG+ +L ++ G S G F+++ VEC+G+C AP
Sbjct: 78 KKIGKYNLQLCTNVPCMLRGAYDLLGHLQTRLGINKGDTSTDGLFTLTTVECIGSCDLAP 137
Query: 648 MIQVNDDYYEDLS 686
+ VN+ Y+ +LS
Sbjct: 138 AMMVNETYHTNLS 150
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 107 bits (256), Expect = 5e-22
Identities = 56/162 (34%), Positives = 92/162 (56%), Gaps = 5/162 (3%)
Frame = +3
Query: 240 SIPFEFSQANQKR-VEALLAIYPEGH--KRGAMIPLLDLAQRQSGGWLPISAMHKVAEIL 410
++ E A+Q+R ++ LA YP+ + A+IP L + Q +GGWL S + A+ +
Sbjct: 5 TVEAEILNADQRRRIDHWLAKYPDDEQGRASAIIPALHILQDDNGGWLERSHVAAAADYI 64
Query: 411 NLPKMRVYEVATFYTMF-IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 587
+P+ +EVATFY+MF + P+G++ V CT C L G+D ++ +++ +G +
Sbjct: 65 GMPRASAFEVATFYSMFHLDEPVGRHKVNFCTNISCCLNGADELVAYAEEKLGIRLGETT 124
Query: 588 PCGKFS-VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
P G+ + V E ECL AC APM+ V+ YY L+ EI+
Sbjct: 125 PDGRITLVREEECLAACTRAPMMVVDGHYYTHLTRERIDEIL 166
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 107 bits (256), Expect = 5e-22
Identities = 52/111 (46%), Positives = 73/111 (65%)
Frame = +3
Query: 129 RTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPE 308
R +Q L + R DSL VHR+ P +NPSIPF+F++ N K ++ +L YP
Sbjct: 111 RQFLQSLPKTQCRPFSAGPQLYSDSLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPP 170
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMF 461
+K+ A++P+LDL QRQ G+ IS M++VA +L +P MRVYEVATFYTM+
Sbjct: 171 QYKKAAVMPILDLGQRQH-GFTSISVMNEVARLLEMPPMRVYEVATFYTMY 220
Score = 57.2 bits (132), Expect = 5e-07
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +3
Query: 600 FSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXX-----XSGRF 764
+++ +ECLGACVNAPM+Q+NDDYYEDL+ K +++ SGR
Sbjct: 217 YTMYNLECLGACVNAPMVQINDDYYEDLTPESIKALLTALKESSTGSAKVPAPGPLSGRQ 276
Query: 765 ASXPLGGLTSLTE 803
GLT+L +
Sbjct: 277 TCENSAGLTNLRD 289
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 105 bits (253), Expect = 1e-21
Identities = 49/125 (39%), Positives = 74/125 (59%)
Frame = +3
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+A YP HK+ A++ L AQ + G W+ + VA+IL +P + V EVATFY M+ +
Sbjct: 19 IAKYPAEHKQSAVMACLIAAQTEVG-WVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTK 77
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
PIGKY + +CT PC L + +K+ +PCG F++ E EC+GAC ++P+
Sbjct: 78 PIGKYKLVICTNLPCQLTHGETAATYLKETLGIGFNETTPCGTFTLKEGECMGACGDSPV 137
Query: 651 IQVND 665
+ VND
Sbjct: 138 MLVND 142
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 105 bits (252), Expect = 1e-21
Identities = 54/135 (40%), Positives = 79/135 (58%)
Frame = +3
Query: 270 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 449
+ R E LL YP G +R AMIP+L AQ + G + + +VA + + ++V EV T+
Sbjct: 8 EARFEKLLTSYPPGRQRSAMIPMLMYAQDELG-CVSDELIAEVARRIGVTPLQVNEVLTY 66
Query: 450 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 629
Y+M R+P+GKYHVQVCT C L D + ++ + G+FS+ EVEC+G
Sbjct: 67 YSMLHRKPLGKYHVQVCTNISCLLHDGDKLYEHTCKKLGITHKEVTADGQFSIEEVECMG 126
Query: 630 ACVNAPMIQVNDDYY 674
AC AP IQ+N D++
Sbjct: 127 ACSWAPAIQINYDFH 141
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 105 bits (252), Expect = 1e-21
Identities = 57/156 (36%), Positives = 83/156 (53%)
Frame = +3
Query: 243 IPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 422
+P E + + + +L YP K AM+P L + Q + G+L + A+ L
Sbjct: 30 LPREKVEHFDRDLAEVLRRYPPDRKAAAMLPALRIGQ-EIFGYLTPAVQRLAADRLGTSP 88
Query: 423 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKF 602
R EVATFY MF RPIG++ V+VCT C L G D + +K + GG S G+
Sbjct: 89 ARAEEVATFYVMFNTRPIGRHLVEVCTNVSCCLTGGDRLFEYLKHKYGVTNGGTSQDGRV 148
Query: 603 SVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
++ EVECLGAC AP + V+++ YE L +EI+
Sbjct: 149 TLREVECLGACGTAPAMLVDEEMYERLDPKKVEEIL 184
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 105 bits (251), Expect = 2e-21
Identities = 48/131 (36%), Positives = 79/131 (60%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
++++ +A YP K+ A++ L +AQ + G WL M +A+ L +P + VYEVATFY
Sbjct: 12 RKIDREVAKYPADRKQSAVMSALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFY 70
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
M+ +P+GKY + VCT PC L G + + +KQ+ + G F++ E EC+G+
Sbjct: 71 NMYNLKPVGKYKLTVCTNLPCALSGGNQTADYLKQKLGIGFNETTTDGLFTLKEGECMGS 130
Query: 633 CVNAPMIQVND 665
C +AP++ VN+
Sbjct: 131 CGDAPVLLVNN 141
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 102 bits (245), Expect = 1e-20
Identities = 51/134 (38%), Positives = 75/134 (55%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
G+ G +I +L AQ G +LP +A L +P +VY V TFYT F P GK+
Sbjct: 22 GNNAGELINILHEAQHLHG-YLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHP 80
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
+ VC T C++RGS+ +L K+ EVG +P GK+S+ + C+GAC AP++ + +
Sbjct: 81 ISVCMGTACYVRGSEKLLEEFKRVLGIEVGETTPDGKYSLDCLRCVGACGLAPVVMIGEK 140
Query: 669 YYEDLSVXDTKEII 710
Y L D K+II
Sbjct: 141 VYGRLQPVDVKKII 154
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 102 bits (245), Expect = 1e-20
Identities = 49/145 (33%), Positives = 87/145 (60%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
+R++ ++ YP KR A +PLL L Q + G++ AM +A+ L + ++ V EV TFY
Sbjct: 9 QRIDEVITHYPV--KRSATLPLLHLIQ-EDAGYISDEAMEWIADKLGIERIHVLEVVTFY 65
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
MF R+PIG+ H++VC T C L G + +++E + + SP G+ +V VECL +
Sbjct: 66 PMFRRKPIGRRHIKVCRTLSCALMGGYKVCETMQKEFDTHLNEVSPDGEVTVEFVECLAS 125
Query: 633 CVNAPMIQVNDDYYEDLSVXDTKEI 707
C AP++ +++ +E+++ +E+
Sbjct: 126 CGTAPVVMIDETLHENVTPARAREL 150
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 101 bits (243), Expect = 2e-20
Identities = 49/137 (35%), Positives = 82/137 (59%)
Frame = +3
Query: 300 YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG 479
YP+ R A++P+L L Q G P+ + AE+L + +V VATFYTM+ + P G
Sbjct: 51 YPDS--RSALLPILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAG 107
Query: 480 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 659
++H+ VCTT C + G + +L ++++ + G +P GKFS+ VEC AC AP++ V
Sbjct: 108 QHHIGVCTTALCAVMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVECNAACDFAPIMMV 167
Query: 660 NDDYYEDLSVXDTKEII 710
N +Y ++++ +EI+
Sbjct: 168 NWEYMDNMTPIRAEEIL 184
>UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium oremlandii OhILAs|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
oremlandii OhILAs
Length = 166
Score = 101 bits (241), Expect = 3e-20
Identities = 52/151 (34%), Positives = 85/151 (56%)
Frame = +3
Query: 261 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 440
Q N ++A A+ GA+IP L Q G+LP A+ V+E L++P ++Y V
Sbjct: 13 QTNSTMLKAKEALQDIKGTEGALIPALHKIQ-SIYGYLPEEALILVSEELDIPITQIYGV 71
Query: 441 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
A+FY++F P G++ + VC T C+++GS IL + E N + G + GKF++
Sbjct: 72 ASFYSLFSLEPKGQHVISVCLGTACYVKGSQNILERLSSELNIQEGNTTEDGKFTLQATR 131
Query: 621 CLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
C+GAC AP+I +++ Y L+ D +I+S
Sbjct: 132 CIGACGLAPVIMIDEKVYGRLTPSDVPKILS 162
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 101 bits (241), Expect = 3e-20
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 4/157 (2%)
Frame = +3
Query: 255 FSQANQKRVEA----LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPK 422
F+ QK+ +A +L+ YP K M+P L L Q G W P + VA+ L +
Sbjct: 6 FTPEEQKKFDAGISEILSHYPPDRKSAGMLPALRLLQDLKG-WCPPEGIRLVAKNLEVTP 64
Query: 423 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKF 602
R YEVA+FY M+ + GKY + VCT C LRG++ +L ++ + + G + F
Sbjct: 65 ERAYEVASFYVMYHLKKPGKYTIDVCTNLSCSLRGAEKMLAYLENKLGLKAGEANE--TF 122
Query: 603 SVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
++ E ECL +C AP +QVN+D++E+L+ E+++
Sbjct: 123 TLRETECLASCGTAPCLQVNEDHHENLTKARVDELLA 159
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 100 bits (240), Expect = 4e-20
Identities = 53/146 (36%), Positives = 85/146 (58%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
++VE +L Y G+KR +I +L L ++ +LP ++ V+ + +P ++Y VATFY
Sbjct: 9 EKVEEILKKY--GYKRENLIKIL-LEIQEIYRYLPEDVINYVSTAMGIPPAKIYGVATFY 65
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
F +P GKY + VC T C + GS +L AI++ET G + FS+ +V CLGA
Sbjct: 66 AQFSLKPKGKYTIMVCDGTACHMAGSPEVLKAIEEETGLTPGNVTEDLMFSLDQVGCLGA 125
Query: 633 CVNAPMIQVNDDYYEDLSVXDTKEII 710
C AP++ +N + Y +L+ KEI+
Sbjct: 126 CALAPVMVINGEVYGNLTADKVKEIL 151
>UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Clostridium cellulolyticum H10
Length = 163
Score = 99 bits (238), Expect = 7e-20
Identities = 48/131 (36%), Positives = 76/131 (58%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
RGA+IP+L Q + G+L + +++E LN+ +Y V TFYT F P G++ + +
Sbjct: 29 RGALIPVLHEVQ-EVYGYLSEDVLKEISEKLNVSLAEIYGVVTFYTQFSLNPKGRFKINI 87
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 677
C T C+++GS IL K++ +VG + GKFS+ C+GAC AP+I +NDD +
Sbjct: 88 CMGTACYVKGSGEILEKFKEKLGIDVGQCTEDGKFSLDACRCIGACGLAPVIMINDDVHG 147
Query: 678 DLSVXDTKEII 710
L D + I+
Sbjct: 148 RLLPDDVEAIL 158
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 99.5 bits (237), Expect = 1e-19
Identities = 50/149 (33%), Positives = 87/149 (58%)
Frame = +3
Query: 267 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 446
NQ +++AL A Y +G+ G ++ + A ++S G+LP + + AE L +P VY VAT
Sbjct: 10 NQSKLDALFAQY-KGNPNGLIVVMA--AIQESQGYLPKDLLVRTAEELGVPLSDVYGVAT 66
Query: 447 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECL 626
FY F RP G++ V +C T C+++G+ + + +++E + G + +FS+ V CL
Sbjct: 67 FYAAFSLRPRGRHSVNLCLGTACYVKGAPEVQSMLEKEMGIKAGNTTEDRRFSLDLVRCL 126
Query: 627 GACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
GAC AP++ VN + Y ++ E++S
Sbjct: 127 GACGIAPVLTVNGEVYPRMTAEKVTEVLS 155
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 99.1 bits (236), Expect = 1e-19
Identities = 44/130 (33%), Positives = 79/130 (60%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
G++I +++ AQ + G+LPI +++ + +P ++ ++TFY+ F +P GKY + +C
Sbjct: 37 GSLIAVMNDAQ-EIFGYLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC 95
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
T C++RG+ +L IK++ EVG + GKFS+ CLGAC AP++ +N + +
Sbjct: 96 MGTACYVRGAAMLLEKIKEKLGIEVGETTEDGKFSLEPTRCLGACALAPVMMINGEVFGR 155
Query: 681 LSVXDTKEII 710
L+ D EI+
Sbjct: 156 LTPNDVDEIL 165
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 98.7 bits (235), Expect = 2e-19
Identities = 51/141 (36%), Positives = 76/141 (53%)
Frame = +3
Query: 288 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 467
L I + H++G++I +L AQ G+LP+S + +A L + +VY +ATFYT F
Sbjct: 26 LKIIEEKRHEKGSLIAILQQAQ-DIYGYLPLSVLKCIARELGIKPAKVYGIATFYTQFRL 84
Query: 468 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
+P GKY + C T C + GS+ I + + QE + G +P G FS+ CLG C AP
Sbjct: 85 QPAGKYQIMFCQGTACHVNGSERIESTLCQELKIKRGETTPDGLFSLESAACLGCCSLAP 144
Query: 648 MIQVNDDYYEDLSVXDTKEII 710
++ +N Y LS II
Sbjct: 145 VMMINGQAYGPLSAEKAIAII 165
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/132 (34%), Positives = 78/132 (59%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
+RG++I +L AQ G +L VA LN+ + VY V +FY+ FI +PIG+Y +
Sbjct: 41 RRGSLIQILHRAQHLFG-YLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
VCT T C+++G+ +L+ K+ G ++P GKF + + C+GAC AP++ VN+ Y
Sbjct: 100 VCTGTACFVKGAPKVLDEFKRRLEIREGESTPDGKFFLGALRCVGACSLAPVVMVNEKVY 159
Query: 675 EDLSVXDTKEII 710
+++ +I+
Sbjct: 160 GNVTAEKVADIL 171
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 97.9 bits (233), Expect = 3e-19
Identities = 49/138 (35%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +3
Query: 303 PEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGK 482
P+G +R A++PLL Q + G++ + ++AE+ V V +FY+ + P G+
Sbjct: 22 PQG-RRSALMPLLREVQ-DAEGFVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGR 79
Query: 483 YHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
YH+QVC+T C L GSDA+ + + + + G +P G+FSV +VECLG+C AP++Q+N
Sbjct: 80 YHLQVCSTLMCALAGSDALWDELVTRLDVQPGEVTPDGRFSVQKVECLGSCGTAPVLQLN 139
Query: 663 DD-YYEDLSVXDTKEIIS 713
D+ +YE + E+++
Sbjct: 140 DEGFYERVGPARLAELLA 157
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 97.9 bits (233), Expect = 3e-19
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 246 PFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQ-SGGWLPISAMHKVAEILNLPK 422
P + + + VEA+L YPEG +R A++PLL LA R+ G ++ S + VAEI +
Sbjct: 7 PPRWPETCKDEVEAILRRYPEGRERSAILPLLHLAMREREGRYIAQSDIEAVAEICGVAP 66
Query: 423 MRVYEVATFYTMFIRRPIGKYHVQVCTTTPC-WLRGSDAILNAIKQETNCEVGGNSPCGK 599
V V +FYTMF R+P+GKY + VC C L G ++ +++ +VG +P G
Sbjct: 67 SYVQSVCSFYTMFRRQPVGKYLITVCGNMACHLLAGGSQLVEHMEKTLGIKVGETTPDGL 126
Query: 600 FSVSEV-ECLGACVNAPMIQVNDDY 671
++ ECL AC AP+I V+ +Y
Sbjct: 127 ITLEVTGECLAACDLAPVIHVDTEY 151
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 97.9 bits (233), Expect = 3e-19
Identities = 48/152 (31%), Positives = 77/152 (50%)
Frame = +3
Query: 255 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 434
FS + ++A YP G R A++PLL L Q + G + + A++L + + V
Sbjct: 3 FSPETHAAAQEIIARYPAGRSRSALLPLLHLVQAEQG-CVTAQGVAFCADVLGITRAEVG 61
Query: 435 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 614
VATFYTM+ R P+G Y V VCT C L G + + + + +P G ++
Sbjct: 62 AVATFYTMYKRHPVGDYLVSVCTNLSCALLGGEDVYERVSKLLGVGHDETTPDGSITLEH 121
Query: 615 VECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
ECL AC AP++ VN ++Y+ + + I+
Sbjct: 122 AECLAACDYAPVMTVNYEFYDQVDPDSAQAIV 153
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 97.5 bits (232), Expect = 4e-19
Identities = 46/133 (34%), Positives = 77/133 (57%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
++ GA++ +L Q + G ++P A+ V EIL +PK ++Y V TFY+ F + P GK+ +
Sbjct: 23 NREGAVVQILQKVQEKYG-YVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVL 81
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 671
++C T C +RG+ +++ +K+E + E G N+ F++ V CLG+C APM V
Sbjct: 82 KICVGTACHVRGAGLLVDKVKEELHIEPGENTEDMLFTLEPVACLGSCALAPMAMVQGTA 141
Query: 672 YEDLSVXDTKEII 710
Y LS +I
Sbjct: 142 YGKLSADKMVSLI 154
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 97.1 bits (231), Expect = 5e-19
Identities = 53/155 (34%), Positives = 85/155 (54%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
FEF + + +++ + +P+ KR A++ L Q G ++P ++ +A++L LP
Sbjct: 6 FEFPEELKTKLQEHINYFPK--KRQAILLCLHEIQNYYG-YIPPESLKPLADMLELPLNH 62
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
V V FY MF R KY ++VC + C L G++ +L A++ + G +P GKF +
Sbjct: 63 VEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKI 122
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
V+CLGAC AP+ VNDD Y+ S EI+S
Sbjct: 123 VPVQCLGACSEAPVFMVNDDEYKFESEVQLNEILS 157
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 96.7 bits (230), Expect = 7e-19
Identities = 49/138 (35%), Positives = 76/138 (55%)
Frame = +3
Query: 297 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 476
+YP +KR A+IP L LAQ + G +LPI +++A + +L V + TFY MF P+
Sbjct: 4 LYP--NKRSALIPALHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPV 60
Query: 477 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 656
GK+ + VC C LRG+D L + Q+ + G + G+F+V ECL AC AP++
Sbjct: 61 GKHVIHVCKNISCMLRGADGFLARLCQKMHISPGETTQDGEFTVIASECLAACDKAPVMI 120
Query: 657 VNDDYYEDLSVXDTKEII 710
V+D + + + I
Sbjct: 121 VDDKVIGPVEITQIDDYI 138
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 96.3 bits (229), Expect = 9e-19
Identities = 48/133 (36%), Positives = 77/133 (57%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
K +I +L Q++ WLP A++KV++ LN+P RVY VATFY +F P GK++V
Sbjct: 27 KADMLIQVLLKIQKEYN-WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVS 85
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
VC T C + G+ IL+ +++ + G + KFS+ V CLG C P++ V+ Y+
Sbjct: 86 VCVGTACHVFGAPKILDRLEKSLGIKAGETTSDLKFSLETVNCLGCCALGPVVVVDGHYH 145
Query: 675 EDLSVXDTKEIIS 713
L D ++I++
Sbjct: 146 GKLPTADAEKILA 158
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 96.3 bits (229), Expect = 9e-19
Identities = 47/132 (35%), Positives = 74/132 (56%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
+GA+I +L AQ G +LP +A L +P VY V +FY+ F +P GK+ + V
Sbjct: 36 KGALIEILHKAQHIFG-YLPRDVQLFIARKLGIPGAEVYGVVSFYSYFTTKPSGKHTISV 94
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 677
C T C++RG+D I+ K+ E + G F++ +V C+GAC AP++ V+D Y
Sbjct: 95 CMGTACFVRGADKIVEKFKERLGIESNETTEDGLFTIKDVRCIGACGLAPVVMVDDKVYG 154
Query: 678 DLSVXDTKEIIS 713
+ V D +II+
Sbjct: 155 RVKVEDVDDIIN 166
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/129 (36%), Positives = 73/129 (56%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
++IPLL Q + G +LP + ++A L +P RVY VATFY F P+GKY V+VC
Sbjct: 17 SLIPLLQRTQERFG-YLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKVCH 75
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 683
T C + G+ I A+K+E E G + G ++ V CLG C AP+I +N+ + L
Sbjct: 76 GTACHVNGAVNIAQALKEELGIEEGQTTEDGLVTLERVACLGCCSLAPVIMINEKVFGKL 135
Query: 684 SVXDTKEII 710
+ ++++
Sbjct: 136 TPDKVRKLV 144
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 94.3 bits (224), Expect = 4e-18
Identities = 51/137 (37%), Positives = 82/137 (59%)
Frame = +3
Query: 276 RVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 455
+++ +LA Y +G K GA+IP+L AQ + G+L + +AE L++P ++Y V TFY
Sbjct: 21 QLDEILAKY-QGVK-GALIPVLQEAQN-AYGYLSKEVIEYIAEKLDIPVSQIYGVVTFYA 77
Query: 456 MFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGAC 635
F P G+ ++VC T C +RG+ AIL A++ GG + KF++ V C+GAC
Sbjct: 78 QFHLNPRGRNIIRVCQGTACHVRGAKAILKALEDNLKITAGGTTADLKFTLETVACIGAC 137
Query: 636 VNAPMIQVNDDYYEDLS 686
AP++ +NDD + L+
Sbjct: 138 GLAPVMMINDDTHGRLT 154
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 93.5 bits (222), Expect = 6e-18
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
K+ A+I +L AQ + G+LP + +++ L++P +VY V TFY F +P GK+ ++
Sbjct: 38 KKDALIQVLHKAQ-ELFGYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIK 96
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN-DDY 671
VC T C+++G+D I +E + G FSV V CLGAC AP++ V+ DD+
Sbjct: 97 VCLGTACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLGACSMAPVVMVDEDDF 156
Query: 672 YEDLSVXDTKEIIS 713
Y ++ +IIS
Sbjct: 157 YGRVTPDMVPQIIS 170
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 93.5 bits (222), Expect = 6e-18
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Frame = +3
Query: 306 EGH---KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 476
+GH KR ++P L Q + G +L A+ ++A + L + V V ++Y+M +PI
Sbjct: 15 QGHYPTKRSPLVPFLLYVQDEVG-YLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPI 73
Query: 477 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 656
GKY+VQVCT C RG + I K+ +P G FS+ EVEC+GAC AP +Q
Sbjct: 74 GKYNVQVCTNICCLQRGGEDIFEHCKKTLGIGHKQTTPDGLFSLEEVECIGACSWAPAVQ 133
Query: 657 VNDDYYEDLS 686
VN D++E+L+
Sbjct: 134 VNYDFHENLT 143
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 93.1 bits (221), Expect = 8e-18
Identities = 46/154 (29%), Positives = 85/154 (55%)
Frame = +3
Query: 249 FEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
FE S A ++ +E + Y + R A I L + Q+Q G W+P A+H +A++L +P
Sbjct: 12 FELSAAEREAIEHEMHHYED--PRAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASD 68
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
V VATFY+ R+P+G++ ++ C + C + G I A++++ N + G + G+F++
Sbjct: 69 VEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTL 128
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
CLG C P + +++D + L+ E++
Sbjct: 129 LPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPELL 162
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 92.7 bits (220), Expect = 1e-17
Identities = 46/129 (35%), Positives = 75/129 (58%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
A+I +L +Q + G+LP + +A+ L L +VY V +FY F +P GKY V VC
Sbjct: 26 ALIEVLHQSQ-ELVGYLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVCM 84
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 683
T C+++G+ AIL ++QE +VG + G+F++++V CLG C P++ VN + L
Sbjct: 85 GTACFVKGAPAILERLEQELGTKVGDTTADGRFTINQVRCLGCCALGPVMTVNQKAHGRL 144
Query: 684 SVXDTKEII 710
+ EI+
Sbjct: 145 TPDTALEIL 153
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 92.7 bits (220), Expect = 1e-17
Identities = 46/128 (35%), Positives = 75/128 (58%)
Frame = +3
Query: 327 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 506
+IP+L Q + G +LP++AM +V+ ++P R+Y V TFY+ F + P GK+ V++C
Sbjct: 33 LIPILQEMQEEYG-YLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHTVRLCAG 91
Query: 507 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
T C ++G+ I I + G +P KF+ V CLG C AP++ ++D YY L+
Sbjct: 92 TACHIKGAPDIGEKIADVLQVKEGETTPDYKFTHKTVACLGTCFLAPVMMIDDRYYGKLT 151
Query: 687 VXDTKEII 710
T+EI+
Sbjct: 152 EEKTEEIL 159
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 91.5 bits (217), Expect = 3e-17
Identities = 44/150 (29%), Positives = 87/150 (58%)
Frame = +3
Query: 261 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 440
+ ++ ++ +++ Y +G K A+ L DL ++ +LP A+ V++ L +P R+YE+
Sbjct: 17 EVDRGKIREIISKY-DGEKSAAVAVLQDL--QEEFRYLPKEALTIVSDELQVPLSRIYEI 73
Query: 441 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
ATFY +F +P GKY ++VC T C ++G ++N +++ N G + F++ EV
Sbjct: 74 ATFYNVFSLKPRGKYLIEVCAGTACHVQGGFNLMNRLERNLNISCGETTEDAMFTLEEVR 133
Query: 621 CLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
CLG C AP+++++ + + L+ + I+
Sbjct: 134 CLGCCSLAPVVRIDGNIHPYLTQDEIPGIL 163
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 91.5 bits (217), Expect = 3e-17
Identities = 45/147 (30%), Positives = 81/147 (55%)
Frame = +3
Query: 270 QKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATF 449
+++ L A YP+ ++P L + + A+ +A L LP M+V E T+
Sbjct: 5 EEKFAQLRATYPKELNSSLVMPFLRIMLDEKKSLGESDAVF-IANYLGLPAMQVKEALTW 63
Query: 450 YTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLG 629
YTMF R P+G + ++VC C L G++ I++ + Q+ + G + G+F++ VECL
Sbjct: 64 YTMFYRHPVGTHVIKVCRNIACSLMGAERIIDHLSQKLGIKPGETTADGRFTLLLVECLA 123
Query: 630 ACVNAPMIQVNDDYYEDLSVXDTKEII 710
+C AP++Q++D Y+E L+ +I+
Sbjct: 124 SCGTAPVMQIDDTYHEQLTEAKIDQIL 150
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/132 (34%), Positives = 72/132 (54%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
R A + ++ QR G WL A+ + AE+L L ++V E+ATFY M RRP+GK + V
Sbjct: 21 REAAVDVMKALQRHYG-WLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHV 79
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 677
C + CW G ++++ + N E GG + G F++ CLG C AP + V D +
Sbjct: 80 CDSISCWALGGESLMAHLAAALNIEPGGTTADGLFTLLPCCCLGNCGEAPTLMVGDTLHG 139
Query: 678 DLSVXDTKEIIS 713
+++ EI++
Sbjct: 140 RVTLERAGEILA 151
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 90.6 bits (215), Expect = 4e-17
Identities = 45/124 (36%), Positives = 73/124 (58%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
H RG++IP+L Q + G+LP + V+E LN+ + VATFY F RP G++ +
Sbjct: 28 HGRGSLIPILQTIQT-AYGYLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHII 86
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 671
+ C+ T C ++G+ I+ + ++ + VG + F++ EV CLGAC AP+I V++D
Sbjct: 87 KACSGTACHVKGAKQIIEKLGKKLDIPVGETTKDTMFTLEEVACLGACSLAPVIMVDEDV 146
Query: 672 YEDL 683
Y L
Sbjct: 147 YGQL 150
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 90.2 bits (214), Expect = 6e-17
Identities = 47/140 (33%), Positives = 76/140 (54%)
Frame = +3
Query: 267 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 446
+Q V+ L I G+ + A IP+L Q + G +LP+ + +V E + K +Y VAT
Sbjct: 2 SQSNVKKYLEIC--GNTKEASIPILQSIQEEYG-YLPLDVLDQVCEESEITKSHLYGVAT 58
Query: 447 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECL 626
FY F P G+ ++VC T C ++G+D + A+K + ++ + G FS+ V CL
Sbjct: 59 FYAQFKLTPKGRNAIKVCKGTACHVKGADITIVAMKDQLGIDIDQTTEDGAFSMETVACL 118
Query: 627 GACVNAPMIQVNDDYYEDLS 686
G C AP+I +N+D + S
Sbjct: 119 GCCSLAPVIMINEDVFGGFS 138
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 90.2 bits (214), Expect = 6e-17
Identities = 47/143 (32%), Positives = 79/143 (55%)
Frame = +3
Query: 282 EALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMF 461
E ++A YP+ KR A++PLL L Q G ++ + AE+L L + V VATFYT +
Sbjct: 36 ELVVAKYPQ--KRSALLPLLHLVQSVDG-YVTGRGIDFCAEVLELSRAEVSGVATFYTQY 92
Query: 462 IRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVN 641
R P G+Y V VCT T C + G D I +++ + + GK ++ +EC AC
Sbjct: 93 KRHPNGEYTVGVCTNTLCAIMGGDEIWDSVSEHLGIGHDETTDDGKVTLERIECNAACDY 152
Query: 642 APMIQVNDDYYEDLSVXDTKEII 710
AP++ N +++++ + T +++
Sbjct: 153 APVVMANWEFFDNQTPESTNQLV 175
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 89.4 bits (212), Expect = 1e-16
Identities = 44/133 (33%), Positives = 75/133 (56%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
K G ++ +L AQ G +LP VA+ + + +VY V +FYT F P GK+ +
Sbjct: 39 KEGHLVTVLHKAQSLFG-YLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPIS 97
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
VC T C+++G+D +++A K + V + GKFS+ + C+GAC AP++ V + Y
Sbjct: 98 VCMGTACFVKGADKVVDAFKNQLGVTVSEVTRDGKFSIDCLRCVGACALAPVVLVGEKVY 157
Query: 675 EDLSVXDTKEIIS 713
+++ K+II+
Sbjct: 158 ANVTPDQVKDIIA 170
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 89.4 bits (212), Expect = 1e-16
Identities = 45/153 (29%), Positives = 83/153 (54%)
Frame = +3
Query: 228 EDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEI 407
E + I +F Q+++E I R ++I +L Q+ S GW+ + ++A I
Sbjct: 8 EMSKKIDIKFKLTIQEKIEIFNIIKNYRTVRSSLIEILKFVQK-SYGWISNELITELACI 66
Query: 408 LNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNS 587
L + K + E+ATFY+ R+PIG+ ++ C + C++ G + I ++++ N VG +
Sbjct: 67 LKISKCDIEEIATFYSQIFRQPIGRNIIKYCDSVVCYVNGCEKIRCSLEKNLNVNVGETT 126
Query: 588 PCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
KF++ + CLG C +P I +NDD Y +++
Sbjct: 127 KDFKFTLLPICCLGNCDKSPTIMINDDLYSNVT 159
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/129 (34%), Positives = 72/129 (55%)
Frame = +3
Query: 327 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 506
+I +L AQ + G+LP VA L++P VY V TFY F P+GKY + VC
Sbjct: 34 LIAVLHKAQ-EIFGFLPEEVQRHVAAALHVPPSEVYGVVTFYNYFTLTPVGKYPINVCMG 92
Query: 507 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
T C+++G+ +L+ ++E + G +P G FS+ CLGAC AP++ V + + L+
Sbjct: 93 TACYVQGAGRLLSLFERELGIQPGQVTPDGLFSLEVCRCLGACGLAPVVTVAGEVHGKLT 152
Query: 687 VXDTKEIIS 713
D ++++
Sbjct: 153 ESDALKLVA 161
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 88.6 bits (210), Expect = 2e-16
Identities = 46/141 (32%), Positives = 79/141 (56%)
Frame = +3
Query: 288 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 467
++ YP+ +R A++PLL L Q + +L + + A+ L L V VA+FYTM+ R
Sbjct: 47 IIGRYPD--RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLTGAEVSAVASFYTMYRR 103
Query: 468 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
RP G+Y V VCT T C + G DAI + +K+ + G ++ +EC AC AP
Sbjct: 104 RPTGEYLVGVCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGVVTLQHIECNAACDYAP 163
Query: 648 MIQVNDDYYEDLSVXDTKEII 710
++ VN +++++ + +E++
Sbjct: 164 VVMVNWEFFDNQTPESARELV 184
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 88.2 bits (209), Expect = 2e-16
Identities = 42/115 (36%), Positives = 67/115 (58%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
+G +I +L AQ G+LP +AE L +P V V TFY++F RP GKY + V
Sbjct: 49 KGQLIRILQKAQ-DIFGYLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINV 107
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
C T C+++G+ +++A+K+ + G +P G F++ C+GAC AP++ VN
Sbjct: 108 CMGTACYVKGAQQVMDALKKRLKIDEGETTPDGLFTLKSTRCVGACGLAPILAVN 162
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/114 (35%), Positives = 67/114 (58%)
Frame = +3
Query: 369 WLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 548
+LP SA+ AE + +P +VY +ATFY F +P G+++++VC T C ++GS+ +L+
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKVCDGTTCHIKGSNILLDE 99
Query: 549 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
I + G + +FS+ V C+GAC AP + VN+ Y ++ KEII
Sbjct: 100 IHKNLGIGPGETTADREFSLETVNCIGACAIAPALLVNERVYPRVNAAALKEII 153
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 86.6 bits (205), Expect = 7e-16
Identities = 44/153 (28%), Positives = 84/153 (54%)
Frame = +3
Query: 252 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 431
EF++ V+ L+ Y H G +IPLL+ Q G +LP+S ++E ++ R+
Sbjct: 6 EFTKEQIDEVDGLIDRYG-AHPSG-LIPLLEKVQELLG-YLPLSIQEYISEKTHISPNRI 62
Query: 432 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVS 611
Y V TFY+ F ++ VQ+C T C+++G+DA++ I+ + G ++ G+F+
Sbjct: 63 YGVVTFYSFFTMEARARHRVQLCLGTACYVKGADAMVEKIENDYQINFGESTEDGRFTFE 122
Query: 612 EVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
+ C+GAC AP++ ++ + + ++V I+
Sbjct: 123 KARCVGACGLAPVVIIDGEVFGKVTVDSLDGIL 155
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 86.6 bits (205), Expect = 7e-16
Identities = 43/120 (35%), Positives = 69/120 (57%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
GHK +IP+L Q + G+LP A+ +VA + + +Y VATFY F +P G+ H
Sbjct: 14 GHK-SEIIPILQDIQ-DAYGYLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKH 71
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
+ VCT T C + G++ +L+A+++ E G + ++S+ V C+G C AP VND+
Sbjct: 72 IMVCTGTACHVSGAEQVLDALERHLGIEEGDVTDDMEYSLESVGCIGCCSLAPCAMVNDE 131
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 86.2 bits (204), Expect = 1e-15
Identities = 42/142 (29%), Positives = 76/142 (53%)
Frame = +3
Query: 258 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 437
SQ + ++A +A P ++ I L + Q G W+ ++ +A L++ +
Sbjct: 14 SQEELQAIDAEIAHVP--YRDAVAIDALKIVQAHRG-WVSDESLSAIAAHLHMSADELDG 70
Query: 438 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 617
+ATFY + RRP+G + +C + CW++G D + I +E E+G + ++++ V
Sbjct: 71 IATFYNLIYRRPVGDKVILLCNSISCWIKGCDNLQQRITEELGVELGETTSDNRYTLLPV 130
Query: 618 ECLGACVNAPMIQVNDDYYEDL 683
CLGAC AP++ V D+ +EDL
Sbjct: 131 TCLGACDKAPVMMVGDELHEDL 152
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 86.2 bits (204), Expect = 1e-15
Identities = 38/131 (29%), Positives = 74/131 (56%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
G +I Q++ ++P A+ A++ ++P+ + Y VATFY+ P GK +++C
Sbjct: 16 GGIIEAYHAVQKEYS-YIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRIC 74
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
+ PC + G+D ++ A+++E ++G +P GKF++ EC+G C P+I +N Y D
Sbjct: 75 ESAPCHIAGADKVVAALEKELGIKMGETTPDGKFTLEFAECVGQCQATPVITINSQPYGD 134
Query: 681 LSVXDTKEIIS 713
++ I++
Sbjct: 135 VTADKIAAILT 145
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 86.2 bits (204), Expect = 1e-15
Identities = 46/133 (34%), Positives = 68/133 (51%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
KR A+IP+L Q + G +LP AM A + VY V+TFY F P+G++ V
Sbjct: 15 KRDALIPVLQDIQGEFG-YLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPVGRHTVT 73
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
VC T C + G IL K + + G +P G F++ V C+GAC +P + V+ D Y
Sbjct: 74 VCQGTACHVMGGHRILEECKSQLGVQPGQTTPDGMFTLETVACIGACALSPAVVVDKDTY 133
Query: 675 EDLSVXDTKEIIS 713
+ EI++
Sbjct: 134 GRMKPERITEILN 146
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 85.8 bits (203), Expect = 1e-15
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Frame = +3
Query: 252 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 431
E ++ N RV + I G + +IP+L Q++ +LP + +A +++L V
Sbjct: 5 EAARHNFTRVNEI--IEKHGKDQSKLIPILQEVQKEYR-YLPEEILTYIATVMDLSPATV 61
Query: 432 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGG-NSPCGKFSV 608
Y VATFY F P GKY + VC T C + GS +LNAI+++ N E G + F+V
Sbjct: 62 YGVATFYAQFSLDPKGKYVINVCDGTACHVSGSLPVLNAIRKKLNLEDGKFTTDDLMFTV 121
Query: 609 SEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
V CLGAC AP++ +N Y ++ + II
Sbjct: 122 ETVSCLGACGLAPVVTINGKVYGKMTPEAIEVII 155
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 85.8 bits (203), Expect = 1e-15
Identities = 44/142 (30%), Positives = 77/142 (54%)
Frame = +3
Query: 288 LLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIR 467
+L YP+ +R + L D+ + ++P +M +A+ L LP ++Y +ATFY
Sbjct: 15 ILEGYPK-EQRYTLAMLQDIQKEFQ--FIPRESMELIADYLELPLSKIYSLATFYKALSL 71
Query: 468 RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
RP GK+ +++C T C +R S + N + G + G+FS+ V CLGAC AP
Sbjct: 72 RPKGKHVIKICDGTACHIRSSQMLANELYTLLKIRPGETTEDGQFSIEMVNCLGACAIAP 131
Query: 648 MIQVNDDYYEDLSVXDTKEIIS 713
+I +++ +Y ++ +EII+
Sbjct: 132 VIVIDETFYGKVTPAKLQEIIA 153
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 85.4 bits (202), Expect = 2e-15
Identities = 36/133 (27%), Positives = 72/133 (54%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
H A I L++ QR S GW+ + ++AE+L + + +ATFY + RRP+G+ +
Sbjct: 20 HPSAAAIEALNIVQR-SHGWISDELLQEIAELLGMSPAELDSIATFYNLIYRRPVGRRVI 78
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 671
C + CW+ G++ + ++ VG + G++++ + CLGAC AP++ + D+
Sbjct: 79 HYCNSVSCWMLGAEDNRRHLSEKLGIAVGETTGNGEYTLLPIVCLGACDKAPVLMIGDET 138
Query: 672 YEDLSVXDTKEII 710
+ ++ +I+
Sbjct: 139 HFNVDPARLDDIL 151
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 85.4 bits (202), Expect = 2e-15
Identities = 38/107 (35%), Positives = 60/107 (56%)
Frame = +3
Query: 366 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 545
G++ AM + A IL + + + E+ATFY R P+G+Y + VC + CW+ G I++
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCDSAVCWMEGYQRIID 95
Query: 546 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
+ Q VGG SP G F++ V C+G C AP + +N + Y L+
Sbjct: 96 YLCQRLKLTVGGTSPDGLFTLLPVCCIGYCDRAPAMMINRNVYGRLT 142
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 8/137 (5%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLA--QRQSGGWLPISA------MHKVAEILNLPKMRVY 434
++ +A YP KR A++ L +A +R++ G P + + VA L + + Y
Sbjct: 10 IDREVAKYPADQKRSAVMGALRIALDERRAAGETPEARCLNPELIEFVANYLGIAPVAAY 69
Query: 435 EVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSE 614
EVATFY M+ +P+GK+ + VCT PC L G I ++ +G S G +++ E
Sbjct: 70 EVATFYNMYDMKPVGKFKITVCTNLPCALSGGVNAAEYISKKLGIAIGETSADGMYTLLE 129
Query: 615 VECLGACVNAPMIQVND 665
EC+GAC +AP++ VN+
Sbjct: 130 GECMGACGDAPVLLVNN 146
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 83.4 bits (197), Expect = 7e-15
Identities = 39/138 (28%), Positives = 75/138 (54%)
Frame = +3
Query: 297 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 476
I G R +++P L+ Q + G ++P A++ + E L++P + +Y + TFY++
Sbjct: 13 ITQSGSSRLSLLPCLEAVQEECG-YIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQK 71
Query: 477 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 656
GKY +++C + PC+L G++ IL+ + E G + +F++ V CLG C +P +
Sbjct: 72 GKYVIRLCNSLPCYLNGTENILDTLVDNLGIEPGQTTLDRRFTLELVPCLGLCDQSPAMV 131
Query: 657 VNDDYYEDLSVXDTKEII 710
+N Y L+ E++
Sbjct: 132 INGVVYGKLTAQLVTEVL 149
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 83.4 bits (197), Expect = 7e-15
Identities = 40/119 (33%), Positives = 67/119 (56%)
Frame = +3
Query: 354 RQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSD 533
+++ G++ + ++A+ ++PK R+Y V +FY+MF P GKY V+VC + C L S
Sbjct: 32 QETYGFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRVCDSVSCRLNESA 91
Query: 534 AILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
++ A+K E + KF++ ECLG C P++ VND YY L+V +I+
Sbjct: 92 DLVRALKDYLKVEENETTKDKKFTLEVAECLGHCDEGPVMMVNDTYYTHLTVTKAIQIL 150
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 82.6 bits (195), Expect = 1e-14
Identities = 37/137 (27%), Positives = 78/137 (56%)
Frame = +3
Query: 300 YPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIG 479
YP + R A + L QR++G W+ + M+ +A++L++ + VATFY R+P+G
Sbjct: 33 YP--YPRAASLDALKCVQRRNG-WVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVG 89
Query: 480 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 659
++ + +C + C+L G++ + A ++E + G + G+F++ + CLG C P + +
Sbjct: 90 RHVILLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMI 149
Query: 660 NDDYYEDLSVXDTKEII 710
++D + + V K+++
Sbjct: 150 DEDTHGLVDVSSVKQLL 166
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 82.2 bits (194), Expect = 2e-14
Identities = 42/152 (27%), Positives = 79/152 (51%)
Frame = +3
Query: 258 SQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 437
S Q+ ++ L++ P+ G I L L Q + G W+ +++H ++ +P +
Sbjct: 22 SSKEQQGIDELISHSPQ--LAGITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDS 78
Query: 438 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 617
VATFY + R+P+GK + C C L G + I +KQ+ N G + +F++ +
Sbjct: 79 VATFYNLIFRQPVGKVVLHPCDGISCDLMGGEHIRQCLKQQLNITAGETTTDNRFTLIPL 138
Query: 618 ECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
CLGAC AP++ N +E+++ + +++S
Sbjct: 139 PCLGACDKAPVMIANKQLFENMTTDELPKLLS 170
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 81.8 bits (193), Expect = 2e-14
Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
Frame = +3
Query: 264 ANQKRVEAL-LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 440
+ KR++ L AI +++ A+I +L AQ + G+L + +A L LP RVY V
Sbjct: 12 SGDKRLKMLDAAIKRHQYQQDALIEILHKAQ-ELFGYLENDLLLYIAHSLKLPPSRVYGV 70
Query: 441 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
ATFY +F P G + VCT T C+++GS AIL +++ T G + G+ S+
Sbjct: 71 ATFYHLFSLAPQGVHSCVVCTGTACYVKGSSAILADLEKATRIHAGETTADGQLSLLTAR 130
Query: 621 CLGACVNAPMI 653
CLGAC AP +
Sbjct: 131 CLGACGIAPAV 141
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 81.4 bits (192), Expect = 3e-14
Identities = 41/131 (31%), Positives = 75/131 (57%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
G ++P+L Q + G ++P + VAE LN+ +++ V TFY F +P G++ ++VC
Sbjct: 36 GNLMPVLQGIQDEYG-YVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRVC 94
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
T C ++G+ I++ ++ +P +++ +V CLGAC AP+ VNDD +
Sbjct: 95 VGTACHVQGAPRIVDTFFEKLGIGHAETTPDLRYTFEKVACLGACGMAPLAMVNDDTFGK 154
Query: 681 LSVXDTKEIIS 713
++V +EII+
Sbjct: 155 MTVQKVEEIIA 165
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 81.4 bits (192), Expect = 3e-14
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Frame = +3
Query: 261 QANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSG-GWLPISAMHKVAEILNLPKMRVYE 437
+A ++V +L + G+ + +I ++ Q SG LP + VAE L++P +VY
Sbjct: 5 RAKMEKVREILNRH--GNSKDNLIQVMLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYS 62
Query: 438 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 617
V TFY+MF P G+Y V+VC + PC + G+ +L ++++ + G + F++ +
Sbjct: 63 VITFYSMFGTEPRGRYLVEVCKSGPCHVSGAKNVLQLLEEKLGIKPGQTTQDRVFTLIQS 122
Query: 618 ECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
C GAC AP I++ + Y +L+ EI+
Sbjct: 123 SCFGACDIAPAIKIGEKVYGNLTSEKLSEIV 153
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 81.0 bits (191), Expect = 4e-14
Identities = 44/114 (38%), Positives = 64/114 (56%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
++ A+I +L AQ + G+L + +A L+LP RVY VATFY F P G++
Sbjct: 35 YRPDALIEVLHRAQ-ELFGYLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSC 93
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 653
VC T C++RG+ AIL A +Q + G +P G+ S+ CLGAC AP +
Sbjct: 94 VVCLGTACYVRGAAAILAAAEQMLGIKAGHTTPDGRLSLETARCLGACGIAPTV 147
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 80.2 bits (189), Expect = 6e-14
Identities = 46/153 (30%), Positives = 79/153 (51%)
Frame = +3
Query: 252 EFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRV 431
E + N + L+ Y +G K+G +IP+L Q G++P A K+ E + L +
Sbjct: 14 ESPEVNLSLINPLIEKY-QG-KKGNLIPVLQGVQ-SIFGYVPREAFIKLNEEMGLQLSDM 70
Query: 432 YEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVS 611
Y VATFY F P+GK+ ++VC T C ++ + I A+++E + G + F++
Sbjct: 71 YGVATFYAQFRLNPVGKHIIKVCHGTACHVQSATKITEALEKELGVKDGHTTEDNLFTLE 130
Query: 612 EVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
V CLG C AP++ + D+ + L+ +I
Sbjct: 131 SVACLGCCSLAPVMMIGDETFGSLNGKKAARVI 163
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 79.8 bits (188), Expect = 8e-14
Identities = 37/112 (33%), Positives = 65/112 (58%)
Frame = +3
Query: 222 TPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVA 401
T E N + FS ++ ++ +A YP ++ A++ L + Q +GGWL + M VA
Sbjct: 3 TTEANNKVEL-FSSEVREEIDRWVAKYPAEWRQSAVMAALRIVQDANGGWLTTALMDDVA 61
Query: 402 EILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQ 557
L++ + VYEVATFY+M+ +P+GK+ + +CT C + SD I+ +++
Sbjct: 62 AYLDMAPIAVYEVATFYSMYELKPVGKHKICICTNVSCMINNSDRIVEHLEK 113
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 79.4 bits (187), Expect = 1e-13
Identities = 42/124 (33%), Positives = 66/124 (53%)
Frame = +3
Query: 294 AIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRP 473
A+ G++ G +I L Q QS G++ AM ++A L LP +VY V TFY F +P
Sbjct: 26 AMRRNGYQAGGLIEALHAVQ-QSYGYIDEEAMGRLATALTLPLSKVYGVVTFYHFFHLKP 84
Query: 474 IGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 653
G++ VC T C+++G+ IL I + + G + G S+ C+GAC AP +
Sbjct: 85 KGRHSCVVCLGTACYIKGAAEILGDIAAAYHIKAGETTADGALSLLTARCVGACGQAPAV 144
Query: 654 QVND 665
++D
Sbjct: 145 VLDD 148
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 79.4 bits (187), Expect = 1e-13
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
G + A+I L Q + G+L + + VA +L +P RVY ATFY F +P G++
Sbjct: 28 GREPHALIETLHTVQ-ECFGYLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHT 86
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
VCT T C+++G+ A+L AI+++ + G + G+ SV CLG+C AP
Sbjct: 87 CVVCTGTACYIKGAPALLGAIEKQYGIKPGETTADGELSVLTARCLGSCGLAP 139
>UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative; n=2; Sphingobacteriales genera
incertae sedis|Rep: NADH-ubiquinone oxidoreductase 24
kDa subunit, putative - Salinibacter ruber (strain DSM
13855)
Length = 249
Score = 78.6 bits (185), Expect = 2e-13
Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Frame = +3
Query: 219 DTPEDNPSIPFE-----FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPIS 383
+ P+ +P F ++ + ++EA YPE + A++ +L LAQ + G +L
Sbjct: 36 ELPDQDPDPAFSDDELVWTDEEEAQIEAWKDQYPED--QAAIMKVLWLAQEKFG-YLAPE 92
Query: 384 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 563
+ A+ L++ + Y VATFY + + G Y + VCT C + G +L+ ++++
Sbjct: 93 VIQLCADTLDMTFTQAYGVATFYHQYFKEEKGTYVLDVCTCFTCQVCGGYDVLHYLEEKL 152
Query: 564 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
G + G F++ E ECLG+C +APM+++ + Y
Sbjct: 153 GVHAGETTDDGMFTIQEAECLGSCGSAPMMEITNGVY 189
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 78.2 bits (184), Expect = 3e-13
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
G A +PLL Q + G +LP AM + ++ ++Y VATFY+ F P+G++
Sbjct: 23 GKSVSAAVPLLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHV 81
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNC--EVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
++VC T C + G+D I A++Q E + G ++V +V C+G C AP++ +
Sbjct: 82 IKVCHGTACHVSGADRINTALRQSLGIKNEDEDTASNGSYTVEDVACIGCCSLAPVMVIG 141
Query: 663 DDYYEDLSVXDTK 701
D+ + +L D +
Sbjct: 142 DETFGNLKGTDAQ 154
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 78.2 bits (184), Expect = 3e-13
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = +3
Query: 297 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 476
I P + ++I +L AQ G +LP +VAE L L +Y V TFY F P
Sbjct: 21 IEPYRGQPNSLIQVLAKAQEYIG-YLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPR 79
Query: 477 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 656
G++ + VC T C+++G+ +L ++ + G +P +F++ V C+GAC AP +
Sbjct: 80 GRHKLSVCAGTACYVKGTKNVLKGVRDAIGIKPGQTTPDSRFTMEIVRCIGACGLAPAVI 139
Query: 657 VN-DDYYEDLSVXDTKEIIS 713
VN D + L EI+S
Sbjct: 140 VNGKDVHGRLEAEQIPEILS 159
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 77.8 bits (183), Expect = 3e-13
Identities = 39/117 (33%), Positives = 64/117 (54%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
H GA +P+L Q ++ G++P A+ +AE LNL + VY V TFY F R G++ V
Sbjct: 33 HLEGATMPILHALQ-ETFGFVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVV 91
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
++C C G A+ ++++ ++G SP G+ ++ + CLG C AP V+
Sbjct: 92 KLCAAEACQSVGGKALAQYVEEKLGVDMGSTSPDGRVTLEPIYCLGLCACAPSALVD 148
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 77.0 bits (181), Expect = 6e-13
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Frame = +3
Query: 252 EFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMR 428
E +QA K + A+ I + + +IP+L Q +L + VA + +P R
Sbjct: 6 ETTQAMVKHLAAVNKILEKYDYSESKLIPILQEVQAVYK-YLSKDMISYVATSIGVPPSR 64
Query: 429 VYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK-FS 605
VY VATFY F +P GKY +++C T C ++ S ILNA+ ++ + + F+
Sbjct: 65 VYGVATFYAHFSMQPKGKYIIKLCDGTACHVKKSHGILNALYEKLKLSGDKRTSDDQLFT 124
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
+ V CLGAC AP++ VN++ Y + EI+
Sbjct: 125 IETVSCLGACGLAPVMVVNEEVYGQCTPEKAIEIV 159
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 77.0 bits (181), Expect = 6e-13
Identities = 43/146 (29%), Positives = 75/146 (51%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
K +L++Y K+ +IP+L LA +++ +L M KVA + +P+ VY +ATFY
Sbjct: 7 KTYTPVLSLYEA--KKENLIPIL-LAFQRNFSYLSRDMMQKVAAYVGVPESSVYNIATFY 63
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
+ F P G + V VC T C + G++ +L I++ + G + + S+ + C G
Sbjct: 64 SQFRLEPPGIHRVHVCRGTACHVMGAERLLRNIEKRLGIKAGETTLDNEISLDTINCAGI 123
Query: 633 CVNAPMIQVNDDYYEDLSVXDTKEII 710
C AP ++V+ Y L+ I+
Sbjct: 124 CGLAPTLEVDGKLYTRLNGSSLNRIL 149
>UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4;
Bacteria|Rep: NAD-reducing hydrogenase, putative -
Geobacter sulfurreducens
Length = 191
Score = 76.6 bits (180), Expect = 8e-13
Identities = 45/132 (34%), Positives = 73/132 (55%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
K VE L Y ++ A++ +L +AQ ++ G L M VA L +P RVY VATFY
Sbjct: 23 KVVERTLKQYQ--YRADALLEVLHVAQ-ETFGCLSDELMTHVARQLRVPPSRVYGVATFY 79
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
F G++ VCT T C+++ S I+ ++ E + + G + GK ++S V CLG+
Sbjct: 80 HFFTLEARGEHSCVVCTGTACYVKRSAEIVTRLENEFDVKAGKTTADGKLTLSTVRCLGS 139
Query: 633 CVNAPMIQVNDD 668
C AP++ ++ +
Sbjct: 140 CGLAPIVVLDGE 151
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 76.6 bits (180), Expect = 8e-13
Identities = 45/137 (32%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
G A+I +L Q + ++P +++ L + + R++ VATFY F P GKY
Sbjct: 22 GTSETAIIAILQSIQEEYH-YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYI 80
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCG---KFSVSEVECLGACVNAPMIQV 659
++VC T C +R S I+ +++E + G P F+V V CLGAC AP+I V
Sbjct: 81 IKVCDGTACHVRKSIPIIERLRKELG--LSGTKPTTDDLMFTVETVSCLGACGLAPVITV 138
Query: 660 NDDYYEDLSVXDTKEII 710
ND Y +++ E+I
Sbjct: 139 NDKVYAEMTPDKASELI 155
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 76.2 bits (179), Expect = 1e-12
Identities = 35/120 (29%), Positives = 64/120 (53%)
Frame = +3
Query: 309 GHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYH 488
G + AM+ L L Q ++ GW+ + + + A++L + + +ATFY+ R P+G
Sbjct: 19 GGAKAAMVEALKLVQ-EAEGWVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTV 77
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
+ +C C+L G DA+ +A+ + G +P GKF++ + C+G C AP+ V +
Sbjct: 78 ILLCDGLSCYLCGGDAVRDAVMSKLGIGFGETTPDGKFTLINICCVGGCDRAPVALVGPE 137
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 75.4 bits (177), Expect = 2e-12
Identities = 39/120 (32%), Positives = 60/120 (50%)
Frame = +3
Query: 327 MIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTT 506
M L DL L ++ VAE +NLP+ V FYTMF RP K+ ++VC +
Sbjct: 52 MAILRDLENLSGNQQLSPETLNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAKFLIRVCKS 111
Query: 507 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
PC + G+ I + +++ G + G F + ECLG C AP + +N D + +L+
Sbjct: 112 GPCHVMGARTIFDYVEKHLGISPGQTTADGLFHLEACECLGICSVAPAMMINYDLHGNLT 171
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 74.5 bits (175), Expect = 3e-12
Identities = 44/133 (33%), Positives = 71/133 (53%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 458
+E +A YPE KR I L Q + G ++ +++ V+E+ +L ++ E+ TFYT+
Sbjct: 10 LEEHIAHYPE--KRAGAIYCLYFMQDKYG-YITKPSLNLVSELTDLSTTQLDELITFYTL 66
Query: 459 FIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACV 638
RRP+G+ ++VC + C RG+ +L A + T +G + G +V CLG C
Sbjct: 67 LRRRPVGRNIMRVCDSISCHTRGAKKVLEAAENATGKALGEIANDGSITVLPSICLGLCD 126
Query: 639 NAPMIQVNDDYYE 677
AP +NDD E
Sbjct: 127 RAPAALINDDRVE 139
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 74.5 bits (175), Expect = 3e-12
Identities = 34/117 (29%), Positives = 58/117 (49%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
A++PLL + ++ + + +++++ L + + TFY F+ P GK V+VC
Sbjct: 29 AVLPLLHYYMEKKN-YISEADVSRISQLTGLSVSDILGIGTFYQHFVFHPTGKNSVRVCL 87
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
TTPC RG + + + +P G F++ +CLG C AP +NDD Y
Sbjct: 88 TTPCLFRGGKKTFETLSKSLGIGLEETTPDGLFTLYPAQCLGQCSEAPSFSINDDVY 144
>UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 163
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Frame = +3
Query: 267 NQKRVEALLAIYPEGHKR--GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEV 440
N K ++ + I E H+ GAM+P+L Q ++P +A+ +A+ LN+ K V+ V
Sbjct: 5 NDKGLQQIATII-EQHQTLPGAMLPILHAIQNDLS-FIPSNALPLIAKALNVSKAEVHGV 62
Query: 441 ATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
+FY F G + +++C C GS A+ IKQ + + S ++++ V
Sbjct: 63 ISFYHHFRTEEPGAHVIEICRGESCQAMGSRALEENIKQNLSIDYHQTSKDRQYTLEPVY 122
Query: 621 CLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
CLG C +P +++ DD + +L + ++II+
Sbjct: 123 CLGNCACSPAMRIGDDIHGELDLQKFEQIIA 153
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 74.1 bits (174), Expect = 4e-12
Identities = 43/155 (27%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Frame = +3
Query: 267 NQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVAT 446
++KR++ ++ YP + G + +L Q Q +P+ + V+E L+LP ++ + T
Sbjct: 2 DEKRLDEIIEKYP--YPAGRTLGVLREIQIQERH-IPMDTLKLVSEKLDLPLSELFALVT 58
Query: 447 FYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC--EVGG-----NSPCGKFS 605
FY+ F +P+G++ + VC TPC ++G++ IL +++ EV +P KF+
Sbjct: 59 FYSFFSLKPVGEHLITVCMGTPCHVKGAEKILETLEEHLGLSGEVQDGKYLQTTPDNKFT 118
Query: 606 VSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
V C GAC AP++ V+ + + ++ EI+
Sbjct: 119 VEIARCFGACSMAPVLHVDGELHGYVTPERIPEIL 153
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 73.3 bits (172), Expect = 7e-12
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Frame = +3
Query: 336 LLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPC 515
L++L G++ VAE L+L + RVYE+ +FY + P KY +++C +TPC
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTPC 86
Query: 516 WLRGSDAILNAIKQETNCEVGGNSPC--GKFSVSEVECLGACVNAPMIQVNDDYYEDLSV 689
G + + ET EV N P G F + C+GAC P+I++ D + L+
Sbjct: 87 HYTGGAMVAEVL--ETILEVPENQPTPDGLFMYHSIPCIGACDLGPVIKIKDTVFSQLTE 144
Query: 690 XDTKEII 710
++I
Sbjct: 145 EKIYQLI 151
>UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor - Victivallis vadensis ATCC BAA-548
Length = 150
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/115 (30%), Positives = 57/115 (49%)
Frame = +3
Query: 366 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 545
G++ ++ ++E +P++ V V +FY F R GKY + +C T C ++GS +
Sbjct: 30 GYVSDESIRAISEYFGIPEVEVEGVLSFYAQFKRVKPGKYKIAICDGTACHIKGSPLVQE 89
Query: 546 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
+ + E G G FS+ V CLG C AP++ VN Y L T +I+
Sbjct: 90 WVSRALGIEDGQTDERGHFSLETVACLGCCSLAPVMSVNGRVYGKLDRKSTIKIL 144
>UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Pseudomonas|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Pseudomonas putida W619
Length = 160
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/131 (28%), Positives = 71/131 (54%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
GA++P+L Q +S G++P +A+ +A LNL V V +FY F P ++ +++C
Sbjct: 23 GALLPILHAVQ-ESIGFIPDAAVADIAHALNLSLAEVRGVISFYHDFRTAPPARHTLRLC 81
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
C RGS+A+ ++++ + G S G S+ V CLGAC +P ++++ +
Sbjct: 82 RAESCQSRGSEALAAQLREQLALDDHGTSADGAISLRPVYCLGACACSPALELDGQVHAR 141
Query: 681 LSVXDTKEIIS 713
L+ + +++
Sbjct: 142 LTPERLRSLVN 152
>UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02806 protein - Schistosoma
japonicum (Blood fluke)
Length = 82
Score = 71.3 bits (167), Expect = 3e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +3
Query: 525 GSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
GS+AILN +K+ E G +P F+++EVECLGACVNAPM+Q+NDDYY
Sbjct: 6 GSEAILNTLKKTLGIEPGQTTPDKMFTLTEVECLGACVNAPMLQINDDYY 55
>UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Synechococcus sp. WH 5701|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Synechococcus sp. WH 5701
Length = 168
Score = 70.1 bits (164), Expect = 7e-11
Identities = 38/113 (33%), Positives = 64/113 (56%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
A+I +L AQ+ +L + VA L LP RV A+FY +F +P ++ VCT
Sbjct: 36 ALIEVLHGAQKLYS-YLSDDLLRHVATRLQLPLSRVKGTASFYHLFRFQPPARHRCVVCT 94
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
T C ++G+ A++ A+++ ++G G S+SEV CLG C +AP++ ++
Sbjct: 95 GTACQIQGAPALIAAMEEGLGLKLGARRGDGWASLSEVRCLGTCSDAPLVLID 147
>UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 163
Score = 70.1 bits (164), Expect = 7e-11
Identities = 39/131 (29%), Positives = 64/131 (48%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
R ++P L + QR G ++ + + + L + M E FY+MF ++ GK+ ++
Sbjct: 24 RALVLPSLWMVQRAQG-FIDAKDVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKF 82
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 677
C T C LRGSD ++ + ++G S G FS+ E ECLG C AP + N + +
Sbjct: 83 CKTITCKLRGSDELIKFTQDILGIKMGETSSDGLFSLGETECLGYCEKAPCMLCNLEQID 142
Query: 678 DLSVXDTKEII 710
L +I
Sbjct: 143 SLDENSITNLI 153
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 68.9 bits (161), Expect = 2e-10
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Frame = +3
Query: 255 FSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVY 434
F N + +A+LA YP + A++PLLDLAQRQ G W+P +AM+++A + + V+
Sbjct: 7 FKPENLQLAKAILARYPLRFQSAALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSIDYVH 66
Query: 435 EVATFY-TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK--FS 605
+ Y F RP K V++C + C + + +N + S K F
Sbjct: 67 SLILAYPNDFFWRP-KKPRVRICNSWMCQQAAEE------QGNSNWDSQCRSVATKYGFD 119
Query: 606 VSEVECLGACVNAPMIQVNDDYY 674
V CLG C P + +ND Y
Sbjct: 120 VENTGCLGNCFQGPAMWINDKIY 142
>UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobacter
sp. ELB17|Rep: ATP synthase subunit E - Marinobacter sp.
ELB17
Length = 178
Score = 68.5 bits (160), Expect = 2e-10
Identities = 36/119 (30%), Positives = 62/119 (52%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
HK GA++P+L Q + G ++P A+ +AE+L + ++ V +FY F P G +
Sbjct: 36 HKPGALLPILHAIQDRVG-YVPEDAVPIIAEMLQQTRADIHGVISFYHHFRTHPSGSNLL 94
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
+VC C RG A+ +++ + + +F++ V CLG C P I+VN+D
Sbjct: 95 EVCRAEACQARGGRALERHVQERLSVGYHDTTADNEFTLVPVYCLGNCACGPSIRVNND 153
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
A + L+ A + +LP+ + V E L++P +V+ V +FY F P GKY +++C
Sbjct: 30 ARLTLILQAIQDEYRYLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRLCD 89
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGG-NSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
T C + S IL A+ + +P F+V V CLGAC AP++ +N++ Y
Sbjct: 90 GTACHAKRSIPILEALYAKLGLSSKKVTTPDMLFTVETVTCLGACGLAPVMLINEEVY 147
>UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Sphingomonadaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Sphingomonas wittichii
RW1
Length = 159
Score = 67.7 bits (158), Expect = 4e-10
Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Frame = +3
Query: 279 VEALLA--IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
VEA++A + +G +RGA++PLL Q + G ++ + VA +NL + V+ V +FY
Sbjct: 9 VEAMVARLLAAQGERRGALLPLLHDLQEELG-FVGEETVAAVAAAMNLSRAEVHGVVSFY 67
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
F + P G++ V+ C C RG AI A+ +G G+ ++ V CLG
Sbjct: 68 HDFRKAPAGRHVVKYCRAESCRSRGGVAIEAALADRLRVTMGETRADGQVTLEPVYCLGL 127
Query: 633 CVNAP 647
C P
Sbjct: 128 CAIGP 132
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 67.7 bits (158), Expect = 4e-10
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = +3
Query: 318 RGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQV 497
RG ++P+L Q + G +P A+ +AE LNL + V+ V TFY F P G+ V+V
Sbjct: 26 RGPLLPILHAVQERLG-CVPAEAVPVLAEELNLSRADVHGVITFYHDFRSEPAGRTTVRV 84
Query: 498 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
C C G+ ++ ++ ++G + G + +V CLG C P QV+ Y
Sbjct: 85 CRAEACQALGASRLVAHLQDRHGVQLGDATDDGTLTAEQVFCLGNCALGPSAQVDGRLY 143
>UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n=3;
Proteobacteria|Rep: Formate dehydrogenase, gamma subunit
- Methylococcus capsulatus
Length = 159
Score = 66.9 bits (156), Expect = 6e-10
Identities = 36/130 (27%), Positives = 65/130 (50%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
GA++P+L Q + G ++P A+ ++A+ LNL + V+ V +FY F GK+ + +C
Sbjct: 23 GALLPILHGIQDRIG-FIPEDAVPQIAKALNLSRAEVHGVISFYHYFRTTAPGKHTIHLC 81
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
C S+++ +K + + G FS+ V CLG C +P + ++ + Y
Sbjct: 82 RAESCQAMNSESLETHVKARLGIDYHETTADGAFSLEPVYCLGNCACSPSMMIDHEVYGH 141
Query: 681 LSVXDTKEII 710
+S II
Sbjct: 142 VSPQSFDAII 151
>UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 168
Score = 66.9 bits (156), Expect = 6e-10
Identities = 37/118 (31%), Positives = 60/118 (50%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
GA++P+L Q ++P A+ VA+ L + +Y V TFY F G++ +++C
Sbjct: 26 GALLPILHDIQHHFD-YIPKKAIAIVAQGLQQTEAEIYGVITFYAHFQLNKPGRHIIEIC 84
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
C GS A+ AIK + + G + F++ V CLG C +P I+V D+ Y
Sbjct: 85 RGEACQAMGSKALEKAIKSQLAVDFGQTTVDKNFTLEPVYCLGNCACSPSIKVADNVY 142
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 66.5 bits (155), Expect = 8e-10
Identities = 39/131 (29%), Positives = 65/131 (49%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
G ++P+L Q + G +P +A+ +A+ LNL + V+ V TFY F RP G++ +++C
Sbjct: 26 GPLLPILHEIQDEFGH-VPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRHVLKLC 84
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 680
C GSDA+ IKQ + G ++ V CLG C +P ++ +
Sbjct: 85 QAEACQSMGSDAVAAKIKQLLGIGFHETTRDGSVTLEPVYCLGLCACSPSAMLDGEVIGR 144
Query: 681 LSVXDTKEIIS 713
L EI++
Sbjct: 145 LDDDKIDEILA 155
>UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1;
Methylophilales bacterium HTCC2181|Rep: ATP synthase
subunit E - Methylophilales bacterium HTCC2181
Length = 157
Score = 66.1 bits (154), Expect = 1e-09
Identities = 37/117 (31%), Positives = 57/117 (48%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
K GA++PL+ Q S G++P + ++ NL ++ TFY F P GK +Q
Sbjct: 21 KPGALLPLMHAIQ-DSLGYIPEDSYPIISSAYNLSIAEIHGFVTFYHHFRTSPSGKNILQ 79
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 665
VC C GS++I N K+ + S G ++ V CLG C +P + +ND
Sbjct: 80 VCRAESCQSMGSESIENYCKKVLGVDYHETSKDGVITLEPVYCLGNCACSPSVMMND 136
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 64.9 bits (151), Expect = 3e-09
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Frame = +3
Query: 264 ANQKRVEALLAIYPEGHKR--GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYE 437
ANQ +E+++ K G ++P+L Q Q G ++P S++ + + LN+ + V+
Sbjct: 22 ANQAEIESVVGRILVELKDIPGPLLPILHEVQHQLG-YVPDSSLPIIGKALNISRAEVHG 80
Query: 438 VATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV 617
V TFY F +P G++ ++VC C G + K + + + ++ V
Sbjct: 81 VVTFYHHFSSKPRGRHIIEVCRAESCQSMGGRDLEAHAKSALGLDWYQTTMDKEITLEPV 140
Query: 618 ECLGACVNAPMIQVNDDYYEDLSVXDTKEII 710
CLG C +P I+V D+ Y + EI+
Sbjct: 141 FCLGNCACSPAIRVGDEVYGRMDAEQFDEIV 171
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/117 (28%), Positives = 58/117 (49%)
Frame = +3
Query: 297 IYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPI 476
I + GA + +L Q + G++P +A+ VA+ LNL + V+ V TFY F +P
Sbjct: 21 IAEHARQEGATLVILHALQA-AFGYVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPA 79
Query: 477 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
G++ +++C C G DA+ + +G + + ++ + CLG C AP
Sbjct: 80 GRHVLKLCRAEACQAAGGDALAARAEARLGVSLGNTTADDRVTLEPIYCLGLCATAP 136
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/125 (25%), Positives = 62/125 (49%)
Frame = +3
Query: 312 HKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHV 491
+ + A I L + Q W+ ++ +++IL++P V +ATFY R+P+G+ +
Sbjct: 21 NSQAACIEALKIVQEHRK-WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGRNII 79
Query: 492 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 671
+ C + C++ +I +K N G + ++++ CLGAC P++ VN
Sbjct: 80 RYCDSVVCFINNFKSIKKKLKYILNISPGETTSDCRYTLLPTCCLGACDKGPVMLVNKTL 139
Query: 672 YEDLS 686
Y L+
Sbjct: 140 YTRLT 144
>UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=1; Jannaschia sp. CCS1|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Jannaschia
sp. (strain CCS1)
Length = 167
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/114 (27%), Positives = 58/114 (50%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
G ++P+L Q + G++P A +A LN+ + ++ V +FY F R+P GK +++C
Sbjct: 29 GPLLPILHDVQA-AFGYVPDDARALIATALNITEAELHGVISFYHDFRRKPAGKRVLKIC 87
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
C G++A+ +A+ + G + G +V + CLG C P ++
Sbjct: 88 RAEACQAMGANAMSDAVLAQLGLGWGETAADGGLTVEPIYCLGLCACGPAAMID 141
>UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=28; Burkholderia|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 171
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +3
Query: 348 AQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 527
A + G++P + + +A+ LNL + V+ V T+Y F P +++C C G
Sbjct: 42 AIQDDAGYVPPACVEPLAKALNLSRAEVHGVLTYYHHFRTAPPAHVTIRLCRAEACRSMG 101
Query: 528 SDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 686
+A++ + C + G + ++ V CLG C +P + +ND+ + +S
Sbjct: 102 GEALVAHAQARAGCRIDGGHG-DRVALESVYCLGLCAQSPSLTINDEPHAKMS 153
>UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Gammaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Marinomonas
sp. MWYL1
Length = 165
Score = 58.4 bits (135), Expect = 2e-07
Identities = 35/132 (26%), Positives = 62/132 (46%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
K GA++PLL Q + ++P A+ +A L L + V+ V +FY F + G++ V+
Sbjct: 24 KPGALLPLLHAIQDRFS-YIPEDAVALIAGALKLSRAEVHGVISFYHHFRTKQPGRHVVE 82
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
VC C G+ + K + + + ++ V CLG C P ++V D+ Y
Sbjct: 83 VCRAEACQAVGARHLEAYAKSILDVQYHQTTADNNITLEPVYCLGNCSCGPSVRVGDEIY 142
Query: 675 EDLSVXDTKEII 710
++ E+I
Sbjct: 143 AEVDTQRFDELI 154
>UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Pseudomonas mendocina ymp|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Pseudomonas
mendocina ymp
Length = 164
Score = 58.0 bits (134), Expect = 3e-07
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +3
Query: 321 GAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVC 500
GA++P+L Q + G +P + +AE L L + V+ V +FY F P G+ +++C
Sbjct: 29 GALLPILHDIQDRLGA-VPPELLPLIAEDLCLSRAEVHGVVSFYHDFRATPPGRQVLKLC 87
Query: 501 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 674
C G A+ ++ + +G G S V CLG C AP + +N + +
Sbjct: 88 QAEACQSMGVKALTAELESKLGLPLGETREDGSLSFEPVYCLGNCACAPSVMLNGELH 145
>UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Maricaulis maris MCS10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Maricaulis
maris (strain MCS10)
Length = 163
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/114 (28%), Positives = 57/114 (50%)
Frame = +3
Query: 324 AMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCT 503
A+I +L Q S G + +A+ +A+ LNL + V V +FY F R+P ++ ++C
Sbjct: 26 ALIEVLHWLQA-SAGHISDAAIATIADALNLSRAEVLGVVSFYHDFRRQPGARHTFKLCR 84
Query: 504 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 665
C G++A+ AI+ + + P +F + V CLG C P +++
Sbjct: 85 AEACQAAGAEAVAAAIEDQLEALSTTDHP-PEFELKSVYCLGNCALGPAAMLDE 137
>UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=2; Proteobacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Stappia aggregata IAM 12614
Length = 626
Score = 54.0 bits (124), Expect = 5e-06
Identities = 35/131 (26%), Positives = 60/131 (45%)
Frame = +3
Query: 273 KRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFY 452
+ ++A+ A + G+ + M+ +L Q + P + H +A L ++ V VA+FY
Sbjct: 24 EEIDAICAQF--GNDKHRMLDILREVQDRYRCIAPATMDH-IAAATGLTRIEVEGVASFY 80
Query: 453 TMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGA 632
+ P G+ +++C G + A + E +VG S G FS+ C+G
Sbjct: 81 SFLSLTPKGRVTIRLCDDIVDRFSGLSEVACAFEDELGLKVGETSNDGAFSLEYTPCIGM 140
Query: 633 CVNAPMIQVND 665
C AP VND
Sbjct: 141 CDQAPAAMVND 151
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 53.6 bits (123), Expect = 6e-06
Identities = 31/113 (27%), Positives = 50/113 (44%)
Frame = +3
Query: 369 WLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 548
W+ A+ ++ L +P+ ++ VA FY F P GKY V + GS A+++
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRVLFSDNITDRMLGSKAMMDR 101
Query: 549 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEI 707
+ E G S G SV++ C G C P + +N+ L+ EI
Sbjct: 102 LCNSLWVERGKVSEDGLVSVAQTACTGMCDQGPALLINNYAIAGLTAERIDEI 154
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 52.8 bits (121), Expect = 1e-05
Identities = 34/111 (30%), Positives = 46/111 (41%)
Frame = +3
Query: 315 KRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQ 494
+R ++P L A GW+ A+ V L +P Y VATFY MF RP +
Sbjct: 34 RRDQLLPALH-ALNDRVGWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRPRPATVLH 92
Query: 495 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
VCT C G+ + A++ E G + CLG C AP
Sbjct: 93 VCTDLACTAAGASRLCAAVESRLGPESG-------VKLERSPCLGLCERAP 136
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 52.8 bits (121), Expect = 1e-05
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Frame = +3
Query: 264 ANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVA 443
ANQ + + I PE +R +I L L Q + L + +A ++NLP ++EVA
Sbjct: 24 ANQAAINNVKTILPEILQRDMLIEYLHLIQDKVSH-LSSDNLSALAFLMNLPLSEIWEVA 82
Query: 444 TFYTMFI-----RRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSV 608
+FY F + P +++CT+ C L S+ IL I N ++ +F
Sbjct: 83 SFYDHFTLVKDSQNPPPTRTIRICTSVTCSLFNSEKILETIAPNDNTKI-------RFIA 135
Query: 609 SEVECLGACVNAPM 650
S CLGAC AP+
Sbjct: 136 S--PCLGACDKAPV 147
>UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2;
Actinomycetales|Rep: NADH dehydrogenase - Arthrobacter
sp. (strain FB24)
Length = 566
Score = 52.0 bits (119), Expect = 2e-05
Identities = 30/91 (32%), Positives = 40/91 (43%)
Frame = +3
Query: 396 VAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 575
VA L LP V A+F+ F P G HV+VC+ C+ A + ++
Sbjct: 53 VARTLGLPAAAVEGPASFFADF-SAPRGARHVRVCSAAACFAATGGAHVPEVEAALGVPS 111
Query: 576 GGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
G SP G S+ V CLG C P V D+
Sbjct: 112 GSKSPDGTVSLQAVRCLGYCFAGPAALVGDE 142
>UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=1;
marine gamma proteobacterium HTCC2080|Rep: Formate
dehydrogenase subunit gamma - marine gamma
proteobacterium HTCC2080
Length = 165
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/116 (25%), Positives = 50/116 (43%)
Frame = +3
Query: 366 GWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 545
G++P A+ VAE+ N+ + + V ++Y+ + P V++C C G A+
Sbjct: 42 GYVPEGAVAVVAEVCNVTRADAHGVFSYYSDLRKTPPPLISVRLCAAEACQAVGGRALAA 101
Query: 546 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIIS 713
A + C N + V CLG C P VND ++SV K ++
Sbjct: 102 AWGEA--CAADPNLAGATGTDEPVFCLGNCALGPAALVNDQLIGNVSVEALKSAVA 155
>UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F;
n=1; Plesiocystis pacifica SIR-1|Rep: Putative NADH
dehydrogenase I chain F - Plesiocystis pacifica SIR-1
Length = 503
Score = 43.2 bits (97), Expect = 0.009
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +3
Query: 306 EGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKY 485
+G KR ++ LL+ + GG P KV+E +P+ VY VA+FYT+ + RP K
Sbjct: 4 KGAKRKVVLQLLE----EHGGMRP-GVARKVSEETGVPEADVYGVASFYTL-LSRPGAK- 56
Query: 486 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 647
+VC C + G++ ++ +K V V CLG C AP
Sbjct: 57 -TRVCQGLTCVMAGAEQVIAELKARGE------------EVEAVSCLGQCDRAP 97
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 43.2 bits (97), Expect = 0.009
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 6/134 (4%)
Frame = +3
Query: 279 VEALLAIYP-EGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 455
V LL P +G++R +I L G L + +A +NLP +VYEVA+FY
Sbjct: 45 VAQLLGPRPADGYRRDLLIEYLHRLNDHFGV-LHDRHLVALARQMNLPMAQVYEVASFYH 103
Query: 456 MF--IR---RPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
F +R + V+VC + C + G+ +L A+ + G G V V
Sbjct: 104 HFEIVRGHDAQAPRLVVRVCDSLSCTMAGARELLEAL--PARLQAAGQ---GDVQVVAVP 158
Query: 621 CLGACVNAPMIQVN 662
C+G C AP+ V+
Sbjct: 159 CVGRCEQAPVAVVH 172
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 41.9 bits (94), Expect = 0.020
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Frame = +3
Query: 276 RVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYT 455
R+ A A+ E + +I L Q + G L + +AE + L + V+EVATFY
Sbjct: 40 RLAASAALAGETPRADRLIEYLHRLQDEHGA-LHADHLAALAEAMKLARAEVFEVATFYH 98
Query: 456 MFIRRPIG-----KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVE 620
F P G V+VC + C + G + ++ + EV V V
Sbjct: 99 HFDFVPAGGKAPPALTVRVCESLGCAMAGGAELAASLASQLGAEV---------RVQRVP 149
Query: 621 CLGACVNAPMIQV 659
C+G C +AP+ V
Sbjct: 150 CVGRCDSAPVAVV 162
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 41.1 bits (92), Expect = 0.036
Identities = 23/93 (24%), Positives = 41/93 (44%)
Frame = +3
Query: 384 AMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 563
A KVAE L + +V V FY+ P+GK+ +++ + + GS + + ++
Sbjct: 43 AQQKVAESLGVCITQVRAVVDFYSFLSTVPLGKFDIRISDSITDHMLGSREVAAGLCRKL 102
Query: 564 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
+ G G+ +S C G C P +N
Sbjct: 103 GIQPGEPRQDGRVGLSFTSCTGLCDQGPAGLIN 135
>UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4;
Leptospira|Rep: Ferredoxin related-protein - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 397
Score = 40.7 bits (91), Expect = 0.047
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 486 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 665
HV +C +T C +GS ++++ I+ +C + + F VS+ CLG C P + V
Sbjct: 306 HVYICESTNCASKGSISLIHRIR---SC-IKKHGKQTDFRVSKSSCLGRCGEGPTLVVYP 361
Query: 666 D--YYEDLSVXDTKEIIS 713
D +Y+ ++ D +EI++
Sbjct: 362 DGIWYQRVNENDAEEIVT 379
>UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1;
Halothermothrix orenii H 168|Rep: NADH dehydrogenase I
chain G - Halothermothrix orenii H 168
Length = 80
Score = 39.5 bits (88), Expect = 0.11
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 480 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 659
K V+VC T C L GS AI++ +K + + K + V C+ +C P + V
Sbjct: 4 KITVEVCVGTSCHLMGSPAIIDYLKNLPD------NIKDKIEIKHVSCMNSCDRGPRVMV 57
Query: 660 NDDYYEDLSVXDTKEIIS 713
ND + + KE I+
Sbjct: 58 NDTVIYNATPERVKEAIT 75
>UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep:
Hydrogenase - Nyctotherus ovalis
Length = 1206
Score = 39.5 bits (88), Expect = 0.11
Identities = 28/131 (21%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Frame = +3
Query: 279 VEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTM 458
++ +LA YP+ ++ ++P++ + + G++ ++ K++E L + ++ + + Y
Sbjct: 639 LDEILAKYPK--EKEYLMPII-IEEHDKKGYISDPSIVKISEHLGMYPAQIESILSSYHY 695
Query: 459 FIRRPIGKYHVQVCTTTP-CWLRGSDAILNAIKQETNCEV--GGNSPCGKFSVSEVECLG 629
F R + +C C ++G +L I++ + GG + G F++ + LG
Sbjct: 696 FPREHTIAILMSICVHCHNCMMKGQGRLLKTIQETYDIHETHGGVAKDGSFTLHTLNWLG 755
Query: 630 ACVN-APMIQV 659
CVN AP + +
Sbjct: 756 YCVNDAPAMMI 766
>UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6;
Halobacteriaceae|Rep: Colbalt chelase thioredoxin -
Haloarcula marismortui (Halobacterium marismortui)
Length = 407
Score = 39.5 bits (88), Expect = 0.11
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 486 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 665
HV VCT C G+ A+L ++Q + C ++ CLG C PM+ V
Sbjct: 318 HVAVCTNQTCAQDGAPAVLERLRQAAR----DSDQCDA-RITRSSCLGRCGEGPMVAVYP 372
Query: 666 D--YYEDLSVXDTKEIIS 713
D +Y + D EI+S
Sbjct: 373 DGVWYGGVEDEDAAEIVS 390
>UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n=1;
Psychromonas ingrahamii 37|Rep: Hydrogenase,
NADP-reducing subunit C - Psychromonas ingrahamii
(strain 37)
Length = 588
Score = 37.1 bits (82), Expect = 0.58
Identities = 20/97 (20%), Positives = 42/97 (43%)
Frame = +3
Query: 372 LPISAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAI 551
+P A+ ++A L++ ++ + FY P G Y + + + + G + I N +
Sbjct: 37 IPQQAIQQLATTLSISIPKIRALIEFYHFLHYHPRGDYDIYISDSIIDHMSGKNEISNYL 96
Query: 552 KQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
++ N ++ G+ +VS C G P +N
Sbjct: 97 CEKLNVKLNQPRADGRVTVSNTSCTGMSDQGPAALIN 133
>UniRef50_Q2Z141 Cluster: Putative ATP-dependent DNA helicase; n=1;
Pseudomonas phage EL|Rep: Putative ATP-dependent DNA
helicase - Pseudomonas phage EL
Length = 760
Score = 35.9 bits (79), Expect = 1.3
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 156 ISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQ---ANQKRVEALLAIYPE 308
+++RS+QT +++ D +F+ PED P PF Q + Q+R+E L + E
Sbjct: 223 VNTRSVQTLLAKEPDGVFIPLCEPEDGPEKPFVTDQLEGSRQQRLEHLRRLMDE 276
>UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 160
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +3
Query: 483 YHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 662
+ + CT C + IL +++E + G S G+F + CL C +P + ++
Sbjct: 78 HEIIACTGERCGKKDGMTILQNLRRELGIKKDGISSDGRFELRTRNCLKQCRTSPNMYID 137
Query: 663 DDYYEDLSVXDTKEIIS 713
Y + D K +++
Sbjct: 138 RKLYSGEQLKDIKTLLN 154
>UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1;
Clostridium cellulolyticum H10|Rep: Putative
uncharacterized protein - Clostridium cellulolyticum H10
Length = 86
Score = 35.5 bits (78), Expect = 1.8
Identities = 17/75 (22%), Positives = 35/75 (46%)
Frame = +3
Query: 489 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 668
+ VC + C L+GS I+N ++ + N+ K + C+G C +++ D
Sbjct: 4 IYVCVGSSCHLKGSYQIINCFQR----MIKENNLESKAELKASFCMGHCTTGVCVKIGDT 59
Query: 669 YYEDLSVXDTKEIIS 713
+Y D+ V + + +
Sbjct: 60 FYGDVGVINAESFFT 74
>UniRef50_A7PC77 Cluster: Chromosome chr2 scaffold_11, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_11, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 65
Score = 35.5 bits (78), Expect = 1.8
Identities = 21/56 (37%), Positives = 37/56 (66%)
Frame = +3
Query: 114 MLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRV 281
ML+ L T + ++R ++ QT+ S +L H D+ ++NPSIP+EF+ AN+++V
Sbjct: 1 MLARLATEARQIFR---QNPQTSRSFS-TALNYHLDSLDNNPSIPWEFNDANKEKV 52
>UniRef50_UPI00003C0AF2 Cluster: PREDICTED: similar to Bone
morphogenetic protein 10 precursor (BMP-10); n=1; Apis
mellifera|Rep: PREDICTED: similar to Bone morphogenetic
protein 10 precursor (BMP-10) - Apis mellifera
Length = 339
Score = 34.3 bits (75), Expect = 4.1
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +3
Query: 138 VQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKR 278
V GLW+ SSRS QT S+ P +PS+ FS KR
Sbjct: 17 VYGLWKTSSRSWQTPRVHAKASIQFDLSIPASSPSVLHRFSNRTSKR 63
>UniRef50_Q0LHA0 Cluster: Peptidase S9, prolyl oligopeptidase active
site region; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Peptidase S9, prolyl oligopeptidase active
site region - Herpetosiphon aurantiacus ATCC 23779
Length = 682
Score = 34.3 bits (75), Expect = 4.1
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 144 GLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKR 278
G++ +++R+ +T A R D +H TPEDNPSI +SQ+ KR
Sbjct: 320 GIYCLATRAARTRAYRYSDGA-MHELTPEDNPSIS-GYSQSLNKR 362
>UniRef50_A7S5S7 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 591
Score = 34.3 bits (75), Expect = 4.1
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +3
Query: 108 KKMLSSLRTGVQGLWRISSRSIQTTASRQHDSLFVHRDTPEDNPSIPFEFSQANQKRVEA 287
+++L SL+ ++ L+ +S + + Q L +D P++ PS + ++A
Sbjct: 218 RRLLLSLKQSLEMLYEDTSEHSSSESRVQLGELLSLKDVPDEEPSRTMTLATRCAAMLDA 277
Query: 288 LLAIYPEGHKRGAMIPL---LDLAQRQSGGWLPI 380
L A+ G R A+IPL L L +R S P+
Sbjct: 278 LTAMTRTGISRFAVIPLEQTLQLVERVSSITEPV 311
>UniRef50_A6F4P8 Cluster: Putative uncharacterized protein; n=1;
Marinobacter algicola DG893|Rep: Putative
uncharacterized protein - Marinobacter algicola DG893
Length = 1036
Score = 33.9 bits (74), Expect = 5.4
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 159 SSRSIQTTASRQHDSLFVHRDTPEDNPSIP 248
S+ SI + ASR H +LFV+RD PE +P
Sbjct: 389 STESITSGASRDHKTLFVYRDAPEKLVRVP 418
>UniRef50_A2DWG3 Cluster: Legume-like lectin family protein; n=2;
Trichomonas vaginalis G3|Rep: Legume-like lectin family
protein - Trichomonas vaginalis G3
Length = 432
Score = 33.1 bits (72), Expect = 9.5
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +3
Query: 162 SRSIQTTASR--QHD--SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKR 320
S S QT+A R QHD S+ VH + D+P+ F++S N+K +E ++ I HKR
Sbjct: 195 SFSAQTSAVRSMQHDLLSMRVHSMSDCDHPNATFDYSSKNKKYIEDMVEI-RRIHKR 250
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 880,854,751
Number of Sequences: 1657284
Number of extensions: 17783146
Number of successful extensions: 42296
Number of sequences better than 10.0: 166
Number of HSP's better than 10.0 without gapping: 40694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42230
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77882636090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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