BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J19
(872 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein. 294 2e-79
M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase... 294 3e-79
BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase (ubi... 294 3e-79
BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase (ubi... 292 9e-79
BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase (ubi... 292 9e-79
D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex... 289 1e-77
X95653-1|CAA64955.1| 746|Homo sapiens enhancer of zeste protein. 33 1.4
U61145-1|AAC51520.1| 746|Homo sapiens enhancer of zeste homolog... 32 2.4
U52965-1|AAC50591.1| 613|Homo sapiens ENX-1 protein. 32 2.4
AC006323-2|AAS02035.1| 664|Homo sapiens unknown protein. 32 2.4
AB208895-1|BAD92132.1| 376|Homo sapiens Enhancer of zeste homol... 32 2.4
>CR456928-1|CAG33209.1| 249|Homo sapiens NDUFV2 protein.
Length = 249
Score = 294 bits (722), Expect = 2e-79
Identities = 139/244 (56%), Positives = 177/244 (72%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ TA + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG ++P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGESTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>M22538-1|AAA75390.1| 249|Homo sapiens NADH-ubiquinone reductase
protein.
Length = 249
Score = 294 bits (721), Expect = 3e-79
Identities = 139/244 (56%), Positives = 176/244 (72%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ TA + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>BC071689-1|AAH71689.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 294 bits (721), Expect = 3e-79
Identities = 139/244 (56%), Positives = 176/244 (72%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ TA + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>BC017487-1|AAH17487.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 292 bits (717), Expect = 9e-79
Identities = 138/244 (56%), Positives = 175/244 (71%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ T + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>BC001632-1|AAH01632.1| 249|Homo sapiens NADH dehydrogenase
(ubiquinone) flavoprotein 2, 24kDa protein.
Length = 249
Score = 292 bits (717), Expect = 9e-79
Identities = 138/244 (56%), Positives = 175/244 (71%), Gaps = 2/244 (0%)
Frame = +3
Query: 117 LSSLRTGVQGLWRISSRSIQTTASRQH--DSLFVHRDTPEDNPSIPFEFSQANQKRVEAL 290
L + G+ W R++ T + +LFVHRDTPE+NP PF+F+ N KR+EA+
Sbjct: 7 LRARAAGLTAHWGRHVRNLHKTVMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAI 66
Query: 291 LAIYPEGHKRGAMIPLLDLAQRQSGGWLPISAMHKVAEILNLPKMRVYEVATFYTMFIRR 470
+ YPEGHK A++P+LDLAQRQ+G WLPISAM+KVAE+L +P MRVYEVATFYTM+ R+
Sbjct: 67 VKNYPEGHKAAAVLPVLDLAQRQNG-WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRK 125
Query: 471 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 650
P+GKYH+QVCTTTPC LR SD+IL AI+++ +VG +P F++ EVECLGACVNAPM
Sbjct: 126 PVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPM 185
Query: 651 IQVNDDYYEDLSVXDTKEIISXXXXXXXXXXXXXSGRFASXPLGGLTSLTEXPTGPGFGV 830
+Q+ND+YYEDL+ D +EII SGRF+ P GGLTSLTE P GPGFGV
Sbjct: 186 VQINDNYYEDLTAKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGV 245
Query: 831 QXAL 842
Q L
Sbjct: 246 QAGL 249
>D88548-1|BAA25988.1| 231|Homo sapiens 24-kDa subunit of complex I
protein.
Length = 231
Score = 289 bits (708), Expect = 1e-77
Identities = 132/214 (61%), Positives = 165/214 (77%)
Frame = +3
Query: 201 SLFVHRDTPEDNPSIPFEFSQANQKRVEALLAIYPEGHKRGAMIPLLDLAQRQSGGWLPI 380
+LFVHRDTPE+NP PF+F+ N KR+EA++ YPEGHK A++P+LDLAQRQ+G WLPI
Sbjct: 19 ALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNG-WLPI 77
Query: 381 SAMHKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 560
SAM+KVAE+L +P MRVYEVATFYTM+ R+P+GKY++QVCTTTPC LR SD+IL AI+++
Sbjct: 78 SAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYYIQVCTTTPCMLRNSDSILEAIQKK 137
Query: 561 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVXDTKEIISXXXXXXXXX 740
+VG +P F++ EVECLGACVNAPM+Q+ND+YYEDL+ D +EII
Sbjct: 138 LGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAGKIPK 197
Query: 741 XXXXSGRFASXPLGGLTSLTEXPTGPGFGVQXAL 842
SGRF+ P GGLTSLTE P GPGFGVQ L
Sbjct: 198 PGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL 231
>X95653-1|CAA64955.1| 746|Homo sapiens enhancer of zeste protein.
Length = 746
Score = 33.1 bits (72), Expect = 1.4
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 389
HRD E P P +F + K +EA+ +++P+ G +L ++Q G LP
Sbjct: 206 HRDDKESRP--PRKFP--SDKILEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 261
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ R + +F+T+F RR C C+L A N K++
Sbjct: 262 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 312
Query: 570 EVGGNSPCG 596
N PCG
Sbjct: 313 TALDNKPCG 321
>U61145-1|AAC51520.1| 746|Homo sapiens enhancer of zeste homolog 2
protein.
Length = 746
Score = 32.3 bits (70), Expect = 2.4
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 389
HRD E P P +F + K EA+ +++P+ G +L ++Q G LP
Sbjct: 206 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 261
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ R + +F+T+F RR C C+L A N K++
Sbjct: 262 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 312
Query: 570 EVGGNSPCG 596
N PCG
Sbjct: 313 TALDNKPCG 321
>U52965-1|AAC50591.1| 613|Homo sapiens ENX-1 protein.
Length = 613
Score = 32.3 bits (70), Expect = 2.4
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 389
HRD E P P +F + K EA+ +++P+ G +L ++Q G LP
Sbjct: 73 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 128
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ R + +F+T+F RR C C+L A N K++
Sbjct: 129 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 179
Query: 570 EVGGNSPCG 596
N PCG
Sbjct: 180 TALDNKPCG 188
>AC006323-2|AAS02035.1| 664|Homo sapiens unknown protein.
Length = 664
Score = 32.3 bits (70), Expect = 2.4
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 389
HRD E P P +F + K EA+ +++P+ G +L ++Q G LP
Sbjct: 124 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 179
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ R + +F+T+F RR C C+L A N K++
Sbjct: 180 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 230
Query: 570 EVGGNSPCG 596
N PCG
Sbjct: 231 TALDNKPCG 239
>AB208895-1|BAD92132.1| 376|Homo sapiens Enhancer of zeste homolog
2 variant protein.
Length = 376
Score = 32.3 bits (70), Expect = 2.4
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3
Query: 213 HRDTPEDNPSIPFEFSQANQKRVEALLAIYPE-GHKRGAMIPLLDLAQRQSGGWLPISAM 389
HRD E P P +F + K EA+ +++P+ G +L ++Q G LP
Sbjct: 248 HRDDKESRP--PRKFP--SDKIFEAISSMFPDKGTAEELKEKYKELTEQQLPGALPPECT 303
Query: 390 HKVAEILNLPKMRVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNC 569
+ R + +F+T+F RR C C+L A N K++
Sbjct: 304 PNIDGPNAKSVQREQSLHSFHTLFCRR---------CFKYDCFLHPFHATPNTYKRKNTE 354
Query: 570 EVGGNSPCG 596
N PCG
Sbjct: 355 TALDNKPCG 363
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,796,928
Number of Sequences: 237096
Number of extensions: 2887127
Number of successful extensions: 13559
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13553
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -