Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P29_F_J13
(433 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 173 1e-42
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 172 2e-42
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 148 6e-35
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 147 1e-34
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 140 2e-32
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 96 2e-19
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 87 1e-16
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 75 8e-13
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 73 3e-12
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 59 3e-08
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 58 1e-07
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 51 9e-06
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 48 6e-05
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 48 8e-05
UniRef50_A7QUI4 Cluster: Chromosome chr10 scaffold_179, whole ge... 45 6e-04
UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum... 41 0.010
UniRef50_A7TGW1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.090
UniRef50_A7DRN8 Cluster: Ribosomal protein L15; n=1; Candidatus ... 37 0.16
UniRef50_Q97BV4 Cluster: 50S ribosomal protein L15P; n=4; Thermo... 37 0.16
UniRef50_A1RWR4 Cluster: Ribosomal protein L15; n=2; Thermoprote... 37 0.21
UniRef50_Q553A3 Cluster: Putative uncharacterized protein; n=2; ... 36 0.48
UniRef50_Q9YF98 Cluster: 50S ribosomal protein L15P; n=3; Desulf... 34 1.5
UniRef50_O02059 Cluster: Putative uncharacterized protein; n=4; ... 33 2.6
UniRef50_Q8TZA8 Cluster: 50S ribosomal protein L15P; n=4; Euryar... 33 2.6
UniRef50_A7BBR5 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG240... 32 4.5
UniRef50_Q2J7H4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.9
UniRef50_Q4DI47 Cluster: Putative uncharacterized protein; n=2; ... 32 5.9
UniRef50_Q53M44 Cluster: At2g43970/F6E13.10; n=5; Oryza sativa|R... 31 7.8
UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2; ... 31 7.8
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 31 7.8
UniRef50_Q2QAQ8 Cluster: 50S ribosomal protein L15; n=2; environ... 31 7.8
UniRef50_Q8TA83 Cluster: DnaJ homolog dnj-10; n=3; Caenorhabditi... 31 7.8
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 173 bits (422), Expect = 1e-42
Identities = 79/131 (60%), Positives = 88/131 (67%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGRIGKHRKHPGGRGNAGG+HHHRIN DKYHPGYFGK+GMRNFH KN +CP +NLDK
Sbjct: 4 GHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDK 63
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXX 364
LW+LVSE+TR YA K PVI++VKA PKQPV
Sbjct: 64 LWSLVSEKTRTTYAE-KKDKAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKI 122
Query: 365 TDVGGACVLSA 397
VGGAC+L A
Sbjct: 123 KGVGGACILVA 133
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 172 bits (419), Expect = 2e-42
Identities = 75/131 (57%), Positives = 89/131 (67%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGRIGKHRKHPGGRGNAGG HHHRIN DKYHPGYFGK+GM+++H +N++FCP +NLDK
Sbjct: 18 GHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFCPTVNLDK 77
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXX 364
LWTLVSEQTR+ A G P+I++V++ PKQPV
Sbjct: 78 LWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKI 137
Query: 365 TDVGGACVLSA 397
VGGACVL A
Sbjct: 138 KSVGGACVLVA 148
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 148 bits (358), Expect = 6e-35
Identities = 72/133 (54%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +2
Query: 5 GHGRIGKHRKHP--GGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNL 178
GHGR+GKHRK GGRG AGG HHHRI M+K+HPGY+GKLGMR FH KN CPV+N+
Sbjct: 18 GHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNPLHCPVVNI 77
Query: 179 DKLWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXX 358
DKLW+LVS+ TR KYA KVPVI++ KA P QPV
Sbjct: 78 DKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAER 136
Query: 359 XXTDVGGACVLSA 397
VGGACVL+A
Sbjct: 137 RIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 147 bits (356), Expect = 1e-34
Identities = 67/131 (51%), Positives = 81/131 (61%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGRIGKHRKHP GRG AGG+HHHRI MDKYHPGYFGK+GMR+FH KN+ CP +N+DK
Sbjct: 69 GHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFHKLKNQTVCPTINIDK 128
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXX 364
LWTLV + R + A + PVI++ P QPV
Sbjct: 129 LWTLVGTEKREECAKNT-SQAPVIDLTDHGIFKLLGKGQLPNQPVVVKCRYISKLAEKKI 187
Query: 365 TDVGGACVLSA 397
+VGGAC+L+A
Sbjct: 188 KEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 140 bits (338), Expect = 2e-32
Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGRIGKHRKHPGGRGNAGG HHHRI DKYHPGYFGK+GMR FH +NK FCP++NLDK
Sbjct: 18 GHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCPIVNLDK 77
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPK-QPVXXXXXXXXXXXXXX 361
LW+LV E + A + VP+I++ + P+ +P
Sbjct: 78 LWSLVPEDVK---AKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKK 134
Query: 362 XTDVGGACVLSA 397
+ GGA VL+A
Sbjct: 135 IKEAGGAVVLTA 146
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 96.3 bits (229), Expect = 2e-19
Identities = 38/61 (62%), Positives = 47/61 (77%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGR+GKHRKHPGGRGN+GG+HHH+I +KYH +FGK GMR + K NF +NLDK
Sbjct: 18 GHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYRKLKQNNFNKSINLDK 77
Query: 185 L 187
+
Sbjct: 78 I 78
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/130 (31%), Positives = 67/130 (51%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
G+GR+GKHRKH GGRG AGG H + ++HP Y GK GMR +H +N ++ ++ +
Sbjct: 18 GYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVYHRKENSDYARPISSAR 77
Query: 185 LWTLVSEQTRLKYASAPHGKVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXX 364
LW ++ ++ R + P KVPVI++ + ++P+
Sbjct: 78 LWGMIPKEQRYDFLDNPE-KVPVIDVREFGYHVVVGGKLSLERPIVVKARYFTPSAKEEI 136
Query: 365 TDVGGACVLS 394
T VGG +++
Sbjct: 137 TKVGGKWIIT 146
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 74.5 bits (175), Expect = 8e-13
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHP 103
G+GR+GKHRKHPGGRG AGG+HHHR NMDKYHP
Sbjct: 18 GNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
Score = 65.7 bits (153), Expect = 4e-10
Identities = 37/112 (33%), Positives = 51/112 (45%)
Frame = +2
Query: 62 GEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPHG 241
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 242 KVPVINIVKAXXXXXXXXXXXPKQPVXXXXXXXXXXXXXXXTDVGGACVLSA 397
+VPVI+ + A P P + GG L A
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAGGVVKLVA 187
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 72.5 bits (170), Expect = 3e-12
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKN 157
GHGRI KHRK+PGG+G +GG+HHH+I ++Y YF K GMR ++ K N
Sbjct: 18 GHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRIYNLEKTLN 68
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 59.3 bits (137), Expect = 3e-08
Identities = 31/65 (47%), Positives = 38/65 (58%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDK 184
GHGR GKHRK PG RGNAG +GMR FH +NK +C ++NLDK
Sbjct: 18 GHGRFGKHRKLPGSRGNAG-------------------VGMRYFHKLRNKFYCQIVNLDK 58
Query: 185 LWTLV 199
LW++V
Sbjct: 59 LWSMV 63
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.6 bits (133), Expect = 1e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +2
Query: 89 DKYHPGYFGKLGMRNFHFXKNKNFCPVLNLDKLWTLV 199
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 51.2 bits (117), Expect = 9e-06
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +2
Query: 5 GHGRIGKHRK--HPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNL 178
G+G KHR H GGRGNAG + H +++ K++P YFGK G N+N C + L
Sbjct: 18 GYGEAKKHRGAGHRGGRGNAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQL 70
Query: 179 DKLWTLVSEQTRLKYASA---PHGKVPV 253
+ + E+ LKY A GKV V
Sbjct: 71 ETINIGELEEYILKYKDAFQVEEGKVVV 98
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 48.4 bits (110), Expect = 6e-05
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 283 LVVSSFDNIDDGDLAMWSRC-ILQPRLFRD*CPKLI*VQNWTEILVLXKVEISHTXFAKV 107
L V+ ++++ + SR +L +F D CP+ + VQ+W + L VE+SHT ++
Sbjct: 42 LTVTGCQSVNNWSSFLRSRFQVLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEI 101
Query: 106 SRMVLVHVDXXXXXXXXXXXXXXXXXVLSDTTMS 5
+ MV +HV+ VL+DTT +
Sbjct: 102 TWMVFIHVNSVVMLTTGHTSTTGVLSVLTDTTFT 135
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 48.0 bits (109), Expect = 8e-05
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPG 106
H RI KH KH GG+ NAGGEH HRIN PG
Sbjct: 19 HSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_A7QUI4 Cluster: Chromosome chr10 scaffold_179, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_179, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 167
Score = 45.2 bits (102), Expect = 6e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNA 58
GHGRIGKH+KHPGGRGNA
Sbjct: 45 GHGRIGKHQKHPGGRGNA 62
>UniRef50_A0RUE5 Cluster: Ribosomal protein L15; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L15 - Cenarchaeum
symbiosum
Length = 138
Score = 41.1 bits (92), Expect = 0.010
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 5 GHGRIGKHRK--HPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNL 178
G G++G+HR H GG G +G HH +M K PG+FG H K + V +L
Sbjct: 18 GWGQVGQHRASGHKGGVGVSGQLKHHFSSMLKEDPGHFGHDSTHPPHSNAAKKWASVRDL 77
Query: 179 DKLWT 193
D T
Sbjct: 78 DDFHT 82
>UniRef50_A7TGW1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 680
Score = 37.9 bits (84), Expect = 0.090
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +2
Query: 8 HGRIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFH 139
HG+ GKH KH G+ G HH + D +H G GK G H
Sbjct: 99 HGKHGKHGKH--GKHGKHGHHHDDDDEDDHHHGKHGKHGKHGHH 140
>UniRef50_A7DRN8 Cluster: Ribosomal protein L15; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L15
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 37.1 bits (82), Expect = 0.16
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 5 GHGRIGKHRK--HPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNL 178
G G++G+HR H GG G G HH K P ++G + H K + V +L
Sbjct: 18 GWGQVGQHRASGHKGGLGVTGMMKHHWSTTLKDEPDHYGHDSTKPPHPNITKKWASVRDL 77
Query: 179 DKLWT 193
D L+T
Sbjct: 78 DDLFT 82
>UniRef50_Q97BV4 Cluster: 50S ribosomal protein L15P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L15P -
Thermoplasma volcanium
Length = 145
Score = 37.1 bits (82), Expect = 0.16
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 5 GHG-RIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFH 139
G G + G+ + GGRGNAG H I M KY P +FG G + H
Sbjct: 15 GRGMKAGRGKGKKGGRGNAGMGKHKWIWMVKYDPLHFGGKGFTSHH 60
>UniRef50_A1RWR4 Cluster: Ribosomal protein L15; n=2;
Thermoprotei|Rep: Ribosomal protein L15 - Thermofilum
pendens (strain Hrk 5)
Length = 151
Score = 36.7 bits (81), Expect = 0.21
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAG--GEHHHRINMD-KYHPGYFGKLG 124
G GR+G+HRK G RG G G H H+ + KY P ++GK G
Sbjct: 17 GWGRVGQHRKS-GSRGGRGLVGYHKHKWSWTVKYAPDWYGKHG 58
>UniRef50_Q553A3 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 1290
Score = 35.5 bits (78), Expect = 0.48
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 GHG-RIGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXKNKN 157
GHG G + H GG G G HH YH GY G N + N N
Sbjct: 195 GHGGHHGGYHHHHGGHGGYHGNPHHHGGHGGYHGGYHGHPEYNNNNNNNNNN 246
>UniRef50_Q9YF98 Cluster: 50S ribosomal protein L15P; n=3;
Desulfurococcaceae|Rep: 50S ribosomal protein L15P -
Aeropyrum pernix
Length = 158
Score = 33.9 bits (74), Expect = 1.5
Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 11 GRIGKHRKH--PGGRGNAGGEHHHRINMDKYHPGYFGKLGMR--NFHFXKNKNFCPVLNL 178
GRIG+HRK GG G AG H KY P ++GK G V L
Sbjct: 22 GRIGQHRKSGSKGGYGAAGLGKHEWTWTIKYAPTWYGKKGFNPPRIRAGLEVTTINVGQL 81
Query: 179 DKLWTLVSEQTRLKYASAPHGKVPVINIVK 268
D++ L+ Q + A GK+ V+N+ K
Sbjct: 82 DEIAALLEAQGK---AEKEDGKI-VVNLEK 107
>UniRef50_O02059 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 706
Score = 33.1 bits (72), Expect = 2.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 5 GHGRIGKHRKHPGG---RGNAGGEHHHRINMDKYHPG 106
G GR G H + GG RG GG H+ RI + +H G
Sbjct: 8 GPGRGGPHHMNGGGGGRRGGGGGMHNQRIQQNPHHGG 44
>UniRef50_Q8TZA8 Cluster: 50S ribosomal protein L15P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanopyrus kandleri
Length = 154
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 41 GGRGNAGGEHHHRINMDKYHPGYFGKLG 124
GGRG AG H ++ KY P +FGK G
Sbjct: 34 GGRGMAGSHKHKWFHVIKYMPDHFGKRG 61
>UniRef50_A7BBR5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 404
Score = 32.7 bits (71), Expect = 3.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 11 GRIGKHRKHPGGRGNAGGEHHHR 79
G G H +H GG + G HHHR
Sbjct: 375 GNDGNHHRHKGGSSSDGSSHHHR 397
>UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG24039;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24039 - Caenorhabditis
briggsae
Length = 991
Score = 32.3 bits (70), Expect = 4.5
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 RINMDKYHPGYFGKLGMRNFHFXKNKNFCPVLNLD-KLWTLVSEQ 208
++ D+Y Y G L + FHF K C + +LD K WT++++Q
Sbjct: 894 KVLADRYKQ-YNGMLKEKKFHFDKLFEICKLTDLDKKQWTILNDQ 937
>UniRef50_Q2J7H4 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 383
Score = 31.9 bits (69), Expect = 5.9
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 38 PGGRGNAGGEHHHRINMDKYHPGYFGKLGMR 130
PGGRG AGGE H + YH G +LG+R
Sbjct: 26 PGGRG-AGGERRHP-GLPDYHSGTSAQLGLR 54
>UniRef50_Q4DI47 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 196
Score = 31.9 bits (69), Expect = 5.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 26 HRKHPGG-RGNAGGEHHHRINMDKYH--PGYFG 115
H++H GG RG +GG H R + D Y PGY G
Sbjct: 76 HQQHRGGNRGYSGGFQHDRRHFDDYRDGPGYSG 108
>UniRef50_Q53M44 Cluster: At2g43970/F6E13.10; n=5; Oryza sativa|Rep:
At2g43970/F6E13.10 - Oryza sativa subsp. japonica (Rice)
Length = 505
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHRINMDKYH 100
G GR GK R GGRG G H+H N YH
Sbjct: 386 GRGR-GKGRGR-GGRGRGRGYHYHNNNQQSYH 415
>UniRef50_Q9UAY0 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 471
Score = 31.5 bits (68), Expect = 7.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHR 79
GHG G PGGR GG HHR
Sbjct: 257 GHGGHGSRSGSPGGRHGHGGSGHHR 281
Score = 31.5 bits (68), Expect = 7.8
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 5 GHGRIGKHRKHPGGRGNAGGEHHHR 79
GHG G PGGR GG HHR
Sbjct: 306 GHGGHGSRSGSPGGRHGHGGSGHHR 330
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.5 bits (68), Expect = 7.8
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -3
Query: 161 RNSCSX*SGNFSYXVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 24
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
>UniRef50_Q2QAQ8 Cluster: 50S ribosomal protein L15; n=2;
environmental samples|Rep: 50S ribosomal protein L15 -
uncultured marine group II euryarchaeote HF70_59C08
Length = 141
Score = 31.5 bits (68), Expect = 7.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +2
Query: 8 HGR---IGKHRKHPGGRGNAGGEHHHRINMDKYHPGYFGKLG 124
HGR G+ GGRGNAG H + KY P ++G G
Sbjct: 15 HGRGKKAGRGAGMRGGRGNAGLNKHRAMTRIKYMPRHYGMHG 56
>UniRef50_Q8TA83 Cluster: DnaJ homolog dnj-10; n=3;
Caenorhabditis|Rep: DnaJ homolog dnj-10 - Caenorhabditis
elegans
Length = 456
Score = 31.5 bits (68), Expect = 7.8
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 41 GGRGNAGGEHHH-RINMDK-YHPGYFGKLGMRNFHF 142
GGRG AGG HHH +++++ + + G GM F+F
Sbjct: 115 GGRGGAGGFHHHGNVDVNEIFRRAFGGGGGMGGFNF 150
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,362,200
Number of Sequences: 1657284
Number of extensions: 7491070
Number of successful extensions: 21598
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 20352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21469
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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