Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P29_F_J13
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.71 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.6  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   6.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   6.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    20   8.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 0.71
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = +2

Query: 98  HPGYFGKLGMRNFHFXKNKNFCPVLNLDKLWTLVSEQTRLKYASAPHGKVPVIN 259
           HP YFGK G +     K   +C  + L  L   V     + YAS      PV N
Sbjct: 303 HPTYFGKTGRKT--VLKTNKYCNFIILFYLSVFV---ILVYYASLDETPNPVTN 351


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 212 SSVQRLMSKAYLSSKLDRN 156
           S +++ +++AY + K+DRN
Sbjct: 88  SQIKKNVTRAYCNKKIDRN 106


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = -3

Query: 212 SSVQRLMSKAYLSSKLDRN 156
           S +++ +++AY + K+DRN
Sbjct: 88  SQIKKNVTRAYCNKKIDRN 106


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 250 RHQYCQSWILQVARQRQTPQT 312
           RH   ++W+    R + TPQ+
Sbjct: 237 RHLERKAWVASFGRPKMTPQS 257


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 321 MTGCLGSLPLPSNL*YPALTILMTGTL 241
           MTG    +P  S + Y    ILM GT+
Sbjct: 271 MTGTKTVMPSQSAIKYRKQVILMLGTV 297


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 11/49 (22%), Positives = 17/49 (34%)
 Frame = -2

Query: 228 DAYFSLVCSETNVQSLSKFKTGQXXXXXXXXXXLIPSLPKYPGWYLSML 82
           D  +  VC   +    S  K GQ           + ++P+   WY   L
Sbjct: 191 DCQYFYVCINGDTPRRSGCKLGQVFDDVGKKCDWVRNVPECADWYKGRL 239


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -3

Query: 188 KAYLSSKLDRNSCSX*SGNFSYXVCQSIQDGTCPC 84
           K Y++  LDR  CS         +  ++Q     C
Sbjct: 42  KNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKC 76


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -3

Query: 188 KAYLSSKLDRNSCSX*SGNFSYXVCQSIQDGTCPC 84
           K Y++  LDR  CS         +  ++Q     C
Sbjct: 42  KNYVNCLLDRGKCSPDGQELKNNLADALQTSCSKC 76


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 51  PRPPGCLRCFPIRP 10
           P P G L  +P RP
Sbjct: 65  PSPRGALGAYPFRP 78


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 188 WTLVSEQTRLK 220
           WT++S  TR+K
Sbjct: 54  WTVISASTRIK 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,111
Number of Sequences: 336
Number of extensions: 1908
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)